FFCP PHASE1:Mm9::chr1:175367343..175367367,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=285 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:175367343..175367367,- | |||
|description=CAGE_peak_at_chr1:175367343..175367367,- | |description=CAGE_peak_at_chr1:175367343..175367367,- | ||
|id=chr1:175367343..175367367,- | |id=chr1:175367343..175367367,- | ||
|ontology_enrichment_celltype=CL:0000084!3.02e-14!11;CL:0000827!3.02e-14!11;CL:0000838!7.60e-13!12;CL:0002031!2.65e-12!25;CL:0000542!1.16e-11!13;CL:0000051!1.16e-11!13;CL:0000791!1.33e-11!9;CL:0000789!1.33e-11!9;CL:0002420!1.33e-11!9;CL:0002419!1.33e-11!9;CL:0000790!1.33e-11!9;CL:0000624!5.68e-10!8;CL:0000988!1.03e-08!32;CL:0002032!1.03e-08!32;CL:0000037!1.03e-08!32;CL:0000566!1.03e-08!32;CL:0000837!1.03e-08!32;CL:0000738!2.44e-08!17;CL:0002087!2.44e-08!17;CL:0000553!2.56e-07!6;CL:0000556!2.56e-07!6;CL:0000893!3.57e-07!6;CL:0002489!3.57e-07!6;CL:0000898!3.57e-07!6;CL:0000809!3.57e-07!6;CL:0000810!3.57e-07!6;CL:0000895!3.57e-07!6;CL:0000808!3.57e-07!6;CL:0000894!3.57e-07!6;CL:0000806!3.57e-07!6;CL:0000807!3.57e-07!6;CL:0000805!3.57e-07!6;CL:0002425!3.57e-07!6;CL:0002436!3.57e-07!6;CL:0002427!3.57e-07!6;CL:0002428!3.57e-07!6;CL:0002429!3.57e-07!6;CL:0002433!3.57e-07!6;CL:0002431!3.57e-07!6;CL:0002432!3.57e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.38e-14,11;CL:0000827,6.38e-14,11;CL:0000838,9.34e-13,12;CL:0000542,9.07e-12,13;CL:0000051,9.07e-12,13;CL:0002031,2.75e-11,25;CL:0000791,3.14e-11,9;CL:0000789,3.14e-11,9;CL:0002420,3.14e-11,9;CL:0002419,3.14e-11,9;CL:0000790,3.14e-11,9;CL:0000738,5.66e-09,17;CL:0002087,5.66e-09,17;CL:0000988,1.11e-08,32;CL:0002032,1.11e-08,32;CL:0000037,1.11e-08,32;CL:0000837,1.11e-08,32;CL:0000625,1.59e-07,1;CL:0000624,1.74e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.54e-19!29;UBERON:0002193!4.62e-18!48;UBERON:0002390!7.48e-18!45;UBERON:0003061!7.48e-18!45;UBERON:0001004!8.71e-16!42;UBERON:0003408!9.15e-15!24;UBERON:0000065!1.09e-14!41;UBERON:0006562!1.67e-14!24;UBERON:0001557!1.67e-14!24;UBERON:0001042!1.67e-14!24;UBERON:0008814!1.67e-14!24;UBERON:0009145!1.67e-14!24;UBERON:0002370!1.55e-13!23;UBERON:0000974!1.55e-13!23;UBERON:0004807!1.55e-13!23;UBERON:0005058!1.55e-13!23;UBERON:0003351!1.55e-13!23;UBERON:0009113!1.55e-13!23;UBERON:0003295!1.55e-13!23;UBERON:0009722!1.55e-13!23;UBERON:0005562!1.55e-13!23;UBERON:0007690!1.55e-13!23;UBERON:0000072!2.16e-12!27;UBERON:0002405!4.81e-10!70;UBERON:0003081!7.28e-09!88;UBERON:0001041!1.20e-08!92;UBERON:0000063!1.43e-08!35;UBERON:0000077!1.45e-08!97;UBERON:0005057!2.11e-08!51;UBERON:0004921!1.08e-07!126;UBERON:0004185!1.08e-07!126;UBERON:0001007!1.96e-07!128;UBERON:0001555!1.96e-07!128;UBERON:0007026!1.96e-07!128;UBERON:0004119!3.48e-07!130;UBERON:0000925!3.48e-07!130;UBERON:0006595!3.48e-07!130;UBERON:0002106!4.81e-07!6;UBERON:0004457!4.81e-07!6;UBERON:0000042!4.81e-07!6;UBERON:0004854!4.81e-07!6;UBERON:0009034!4.81e-07!6;UBERON:0002095!4.81e-07!6;UBERON:0004782!4.81e-07!6;UBERON:0003281!4.81e-07!6;UBERON:0009664!4.81e-07!6;UBERON:0002296!4.81e-07!6;UBERON:0005602!4.81e-07!6;UBERON:0001179!4.81e-07!6;UBERON:0006293!4.81e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.72e-09,6;UBERON:0004457,3.72e-09,6;UBERON:0000042,3.72e-09,6;UBERON:0004854,3.72e-09,6;UBERON:0009034,3.72e-09,6;UBERON:0002095,3.72e-09,6;UBERON:0004782,3.72e-09,6;UBERON:0003281,3.72e-09,6;UBERON:0009664,3.72e-09,6;UBERON:0002296,3.72e-09,6;UBERON:0005602,3.72e-09,6;UBERON:0001179,3.72e-09,6;UBERON:0006293,3.72e-09,6;UBERON:0002193,5.82e-09,48;UBERON:0002405,5.82e-09,48;UBERON:0000029,1.38e-07,1;UBERON:0001097,1.38e-07,1;UBERON:0003968,1.38e-07,1;UBERON:0001467,1.38e-07,1;UBERON:0002390,1.58e-07,45;UBERON:0003061,1.58e-07,45;UBERON:0004177,5.92e-07,29;UBERON:0005057,5.92e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.563154888606667,0.70219357896598,0.34243593645101,0,4.79362043807376,13.5501623749446,0.666219523631325,0.607425802169478,0,2.05050407482854,2.19383093769182,0.84877930359606,0.0850432901510698,2.97872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,12.4290184150642,0.890652834388949,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0645701836653,0,0,0,0,0,0,0,0.472905432318573,0.44292937929755,0,1.80249646187312,0.863424909329478,1.44649058581512,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,2.39219233116994,0,0.185194527369712,0.941842285023455,1.77702496037333,1.37266903923914,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.102710957164827,0.129920822977795,0,0,0.360586348559907,0.590758108698309,0.302899349844443,0.381034033274999,0.302478555410522,0.292373642219257,0.384847366561318,0.584384510907845,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.563154888606667,0.70219357896598,0.34243593645101,0,4.79362043807376,13.5501623749446,0.666219523631325,0.607425802169478,0,2.05050407482854,2.19383093769182,0.84877930359606,0.0850432901510698,2.97872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,12.4290184150642,0.890652834388949,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0645701836653,0,0,0,0,0,0,0,0.472905432318573,0.44292937929755,0,1.80249646187312,0.863424909329478,1.44649058581512,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,2.39219233116994,0,0.185194527369712,0.941842285023455,1.77702496037333,1.37266903923914,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.102710957164827,0.129920822977795,0,0,0.360586348559907,0.590758108698309,0.302899349844443,0.381034033274999,0.302478555410522,0.292373642219257,0.384847366561318,0.584384510907845,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843 | ||
|short_description=p@chr1:175367343..175367367,- | |short_description=p@chr1:175367343..175367367,- | ||
}} | }} |
Latest revision as of 08:11, 5 August 2015
Short description: | p@chr1:175367343..175367367, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:175367343..175367367, - |
Coexpression cluster: | MCL_coexpression_mm9:285 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.38e-14 | 11 |
pro-T cell | 6.38e-14 | 11 |
lymphoid lineage restricted progenitor cell | 9.34e-13 | 12 |
lymphocyte | 9.07e-12 | 13 |
common lymphoid progenitor | 9.07e-12 | 13 |
hematopoietic lineage restricted progenitor cell | 2.75e-11 | 25 |
mature alpha-beta T cell | 3.14e-11 | 9 |
alpha-beta T cell | 3.14e-11 | 9 |
immature T cell | 3.14e-11 | 9 |
mature T cell | 3.14e-11 | 9 |
immature alpha-beta T cell | 3.14e-11 | 9 |
leukocyte | 5.66e-09 | 17 |
nongranular leukocyte | 5.66e-09 | 17 |
hematopoietic cell | 1.11e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.11e-08 | 32 |
hematopoietic stem cell | 1.11e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.11e-08 | 32 |
CD8-positive, alpha-beta T cell | 1.59e-07 | 1 |
CD4-positive, alpha-beta T cell | 1.74e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.72e-09 | 6 |
cavity lining | 3.72e-09 | 6 |
serous membrane | 3.72e-09 | 6 |
gastrointestinal system mesentery | 3.72e-09 | 6 |
stomach region | 3.72e-09 | 6 |
mesentery | 3.72e-09 | 6 |
gastrointestinal system serosa | 3.72e-09 | 6 |
mesentery of stomach | 3.72e-09 | 6 |
gut mesentery | 3.72e-09 | 6 |
dorsal mesentery | 3.72e-09 | 6 |
dorsal mesogastrium | 3.72e-09 | 6 |
peritoneal cavity | 3.72e-09 | 6 |
spleen primordium | 3.72e-09 | 6 |
hemolymphoid system | 5.82e-09 | 48 |
immune system | 5.82e-09 | 48 |
lymph node | 1.38e-07 | 1 |
axillary lymph node | 1.38e-07 | 1 |
peripheral lymph node | 1.38e-07 | 1 |
shoulder | 1.38e-07 | 1 |
hematopoietic system | 1.58e-07 | 45 |
blood island | 1.58e-07 | 45 |
hemopoietic organ | 5.92e-07 | 29 |
immune organ | 5.92e-07 | 29 |