FFCP PHASE1:Hg19::chr11:91957916..91957921,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:91957916..91957921,+ | |||
|coexpression_cluster_id=C2174 | |||
|description=CAGE_peak_at_chr11:91957916..91957921,+ | |description=CAGE_peak_at_chr11:91957916..91957921,+ | ||
|id=chr11:91957916..91957921,+ | |id=chr11:91957916..91957921,+ | ||
|ontology_enrichment_celltype=CL:0000047!1.74e-07!8;CL:0002319!2.60e-07!25 | |ontology_enrichment_celltype=CL:0000047!1.74e-07!8;CL:0002319!2.60e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000062;8.86e-15;9!CL:0000047;1.29e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,3.26e-12,11;CL:0000375,3.26e-12,11;CL:0000335,3.26e-12,11;CL:0000047,4.34e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000335;3.31e-12;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.80e-29!94;UBERON:0001016!3.80e-29!94;UBERON:0001017!7.35e-28!82;UBERON:0005743!2.73e-27!86;UBERON:0001049!7.19e-26!57;UBERON:0005068!7.19e-26!57;UBERON:0006241!7.19e-26!57;UBERON:0007135!7.19e-26!57;UBERON:0001893!7.13e-25!34;UBERON:0002020!8.15e-25!34;UBERON:0003528!8.15e-25!34;UBERON:0002780!8.58e-25!41;UBERON:0001890!8.58e-25!41;UBERON:0006240!8.58e-25!41;UBERON:0001869!1.20e-24!32;UBERON:0003080!5.36e-24!42;UBERON:0002791!1.55e-23!33;UBERON:0000955!1.97e-23!69;UBERON:0006238!1.97e-23!69;UBERON:0002616!4.03e-23!59;UBERON:0000956!6.29e-20!25;UBERON:0000203!6.29e-20!25;UBERON:0003075!7.28e-19!86;UBERON:0007284!7.28e-19!86;UBERON:0003056!7.97e-19!61;UBERON:0002346!1.40e-18!90;UBERON:0001950!6.89e-18!20;UBERON:0002619!6.80e-16!22;UBERON:0000924!3.81e-15!173;UBERON:0006601!3.81e-15!173;UBERON:0004121!4.09e-15!169;UBERON:0000033!5.63e-12!123;UBERON:0007023!1.82e-11!115;UBERON:0000153!6.85e-11!129;UBERON:0007811!6.85e-11!129;UBERON:0001871!1.88e-07!7;UBERON:0000468!3.45e-07!659;UBERON:0000200!6.53e-07!6;UBERON:0000475!6.68e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001882;1.66e-15;1!UBERON:0001874;1.66e-15;1!UBERON:0005403;1.66e-15;1!UBERON:0000369;3.94e-15;4!UBERON:0002435;3.94e-15;4!UBERON:0000204;3.94e-15;4!UBERON:0009663;4.75e-09;7!UBERON:0001474;1.12e-07;18!UBERON:0002420;3.14e-07;9!UBERON:0000125;3.14e-07;9!UBERON:0007245;3.14e-07;9!UBERON:0002308;3.14e-07;9!UBERON:0010009;3.14e-07;9!UBERON:0010011;3.14e-07;9!UBERON:0000454;3.14e-07;9!UBERON:0002791;4.65e-07;32!UBERON:0003528;5.70e-07;34!UBERON:0002020;5.70e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001882,1.54e-15,1;UBERON:0005403,1.54e-15,1;UBERON:0001874,1.78e-15,1;UBERON:0000369,3.94e-15,4;UBERON:0002435,3.94e-15,4;UBERON:0000204,3.94e-15,4;UBERON:0010082,3.94e-15,4;UBERON:0001016,3.45e-09,89;UBERON:0009663,4.76e-09,7;UBERON:0001017,6.59e-08,81;UBERON:0002420,3.14e-07,9;UBERON:0000125,3.14e-07,9;UBERON:0007245,3.14e-07,9;UBERON:0002308,3.14e-07,9;UBERON:0010009,3.14e-07,9;UBERON:0010011,3.14e-07,9;UBERON:0000454,3.14e-07,9;UBERON:0002791,3.75e-07,32;UBERON:0001869,3.75e-07,32;UBERON:0003528,9.36e-07,34;UBERON:0002020,9.36e-07,34;UBERON:0001893,9.36e-07,34 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.85870796139317,0.410623275218653,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0.710019185033229,0.302256294682921,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0.508189248444927,2.60279707715243,0,1.17261385734044,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09883357782012,1.56768049849117,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0.969332746095218,0,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0.844175070377856,0,0.221158519862449,0.591095237907095,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0.123563938946503,0.104421949505455,0.337005664903385,0,0.702793337176017,0,0,0,0,0,0.91821828489147,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0.425246896606173,0,0,0.262272940674991,0,0,0.383830394638891,0,0,0,0.542999601753713,0,0.326587360109409,0,0.246277562248017,0,0.113312091520126,0,0,0.387848869084652,0.39669780522807,0,0,0,1.72924735609633,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,0,0,0.372578417648301,0,0.124980407962107,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0.639471856518258,1.1860729253635,0.157265941855896,0.54604819096007,0,0.212574920101683,0,0,0,0,0,0,0,1.34881372702565,0,0.638535436228605,0.41023272848151,1.00828678488687,0.484100767249525,0.161475645631851,0,0,0,0,0,0,0,1.5913297769302,0.0752103283492573,0,0,0,0,0,0.607838261565552,0,0.826747186004736,0.697573912132975,4.37579847214576,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0,0,0,0,0.526182188502793,0,0,0.078493092850514,1.25692471932802,0,0,0.431855182437243,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0.905777061400041,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.747906392100062,1.74540276136151,0,0,0,0,0,0,0.633492505057185,0,0.26721740526556,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 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| ||
|short_description=p@chr11:91957916..91957921,+ | |short_description=p@chr11:91957916..91957921,+ | ||
}} | }} |
Latest revision as of 03:29, 24 July 2015
Short description: | p@chr11:91957916..91957921, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:91957916..91957921, + |
Coexpression cluster: | C2174_parietal_occipital_Saos2_caudate_lung_small_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 3.26e-12 | 11 |
osteoprogenitor cell | 3.26e-12 | 11 |
mesenchyme condensation cell | 3.26e-12 | 11 |
neuronal stem cell | 4.34e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
nucleus accumbens | 1.54e-15 | 1 |
ventral striatum | 1.54e-15 | 1 |
putamen | 1.78e-15 | 1 |
corpus striatum | 3.94e-15 | 4 |
striatum | 3.94e-15 | 4 |
ventral part of telencephalon | 3.94e-15 | 4 |
future corpus striatum | 3.94e-15 | 4 |
nervous system | 3.45e-09 | 89 |
telencephalic nucleus | 4.76e-09 | 7 |
central nervous system | 6.59e-08 | 81 |
basal ganglion | 3.14e-07 | 9 |
neural nucleus | 3.14e-07 | 9 |
nuclear complex of neuraxis | 3.14e-07 | 9 |
nucleus of brain | 3.14e-07 | 9 |
aggregate regional part of brain | 3.14e-07 | 9 |
collection of basal ganglia | 3.14e-07 | 9 |
cerebral subcortex | 3.14e-07 | 9 |
regional part of telencephalon | 3.75e-07 | 32 |
cerebral hemisphere | 3.75e-07 | 32 |
brain grey matter | 9.36e-07 | 34 |
gray matter | 9.36e-07 | 34 |
telencephalon | 9.36e-07 | 34 |