FFCP PHASE1:Mm9::chr1:156902102..156902145,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (5 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:156902102..156902145,+ | |||
|description=CAGE_peak_at_chr1:156902102..156902145,+ | |description=CAGE_peak_at_chr1:156902102..156902145,+ | ||
|id=chr1:156902102..156902145,+ | |id=chr1:156902102..156902145,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.74e-16!32;CL:0002032!1.74e-16!32;CL:0000037!1.74e-16!32;CL:0000566!1.74e-16!32;CL:0000837!1.74e-16!32;CL:0000049!4.92e-15!19;CL:0000553!2.68e-13!6;CL:0000556!2.68e-13!6;CL:0002320!4.19e-13!46;CL:0000134!4.19e-13!46;CL:0000219!6.97e-11!54;CL:0000050!6.50e-09!9;CL:0002031!6.77e-09!25;CL:0000063!1.48e-08!66;CL:0000763!1.92e-07!16;CL:0000034!2.10e-07!97;CL:0000414!2.61e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.27e-26,6;CL:0000556,1.27e-26,6;CL:0000050,4.50e-18,9;CL:0000839,8.73e-13,13;CL:0002031,9.10e-12,25;CL:0000763,1.53e-10,16;CL:0000988,2.45e-09,32;CL:0002032,2.45e-09,32;CL:0000037,2.45e-09,32;CL:0000837,2.45e-09,32;CL:0000049,5.31e-09,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.19e-13!46;UBERON:0002371!1.92e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.53e-10,16;UBERON:0001474,7.09e-08,22;UBERON:0004765,7.09e-08,22;UBERON:0001434,7.09e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,1.26184866143295,1.09691546884591,1.69755860719212,0,0.794327609607082,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8821854733646,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,1.26184866143295,1.09691546884591,1.69755860719212,0,0.794327609607082,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8821854733646,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:156902102..156902145,+ | |short_description=p@chr1:156902102..156902145,+ | ||
}} | }} | ||
Latest revision as of 01:09, 5 August 2015
| Short description: | p@chr1:156902102..156902145, + |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr1:156902102..156902145, + |
| Coexpression cluster: | MCL_coexpression_mm9:6 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| megakaryocyte progenitor cell | 1.27e-26 | 6 |
| megakaryocyte | 1.27e-26 | 6 |
| megakaryocyte-erythroid progenitor cell | 4.50e-18 | 9 |
| myeloid lineage restricted progenitor cell | 8.73e-13 | 13 |
| hematopoietic lineage restricted progenitor cell | 9.10e-12 | 25 |
| myeloid cell | 1.53e-10 | 16 |
| hematopoietic cell | 2.45e-09 | 32 |
| hematopoietic oligopotent progenitor cell | 2.45e-09 | 32 |
| hematopoietic stem cell | 2.45e-09 | 32 |
| hematopoietic multipotent progenitor cell | 2.45e-09 | 32 |
| common myeloid progenitor | 5.31e-09 | 19 |
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 1.53e-10 | 16 |
| bone element | 7.09e-08 | 22 |
| skeletal element | 7.09e-08 | 22 |
| skeletal system | 7.09e-08 | 22 |