FFCP PHASE1:Hg19::chr11:70244451..70244505,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000530690_5end | |association_with_transcript=0bp_to_ENST00000530690_5end | ||
|cluster_id=chr11:70244451..70244505,- | |||
|description=CAGE_peak_1_at_ENST00000530690_5end | |description=CAGE_peak_1_at_ENST00000530690_5end | ||
|id=chr11:70244451..70244505,- | |id=chr11:70244451..70244505,- | ||
|ontology_enrichment_celltype=CL:0002319!1.81e-08!25;CL:0000055!4.01e-08!180 | |ontology_enrichment_celltype=CL:0002319!1.81e-08!25;CL:0000055!4.01e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0002319;5.19e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.78e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.74e-21!143;DOID:305!2.98e-16!106;DOID:162!8.41e-16!235;DOID:14566!1.40e-15!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.07e-07;22!DOID:2994;1.07e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.26e-19,143;DOID:162,2.20e-14,235;DOID:14566,4.91e-14,239;DOID:305,5.94e-14,106;DOID:3095,6.82e-07,22;DOID:2994,6.82e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.15e-11!94;UBERON:0001016!4.15e-11!94;UBERON:0001017!2.12e-10!82;UBERON:0005743!1.94e-09!86;UBERON:0000475!2.07e-09!365;UBERON:0000924!4.20e-08!173;UBERON:0006601!4.20e-08!173;UBERON:0000468!5.61e-08!659;UBERON:0000955!1.18e-07!69;UBERON:0006238!1.18e-07!69;UBERON:0004121!3.05e-07!169;UBERON:0001049!5.74e-07!57;UBERON:0005068!5.74e-07!57;UBERON:0006241!5.74e-07!57;UBERON:0007135!5.74e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.30e-12,89;UBERON:0001017,3.61e-10,81;UBERON:0011216,4.27e-09,223;UBERON:0000955,1.62e-07,68;UBERON:0006238,1.62e-07,68;UBERON:0004121,4.55e-07,171;UBERON:0000924,4.55e-07,171;UBERON:0006601,4.55e-07,171;UBERON:0001049,4.70e-07,56;UBERON:0005068,4.70e-07,56;UBERON:0006241,4.70e-07,56;UBERON:0007135,4.70e-07,56 | |||
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| ||
|short_description=p1@ENST00000530690 | |short_description=p1@ENST00000530690 | ||
}} | }} |
Latest revision as of 02:03, 24 July 2015
Short description: | p1@ENST00000530690 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000530690_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530690_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.78e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.30e-12 | 89 |
central nervous system | 3.61e-10 | 81 |
organ system subdivision | 4.27e-09 | 223 |
brain | 1.62e-07 | 68 |
future brain | 1.62e-07 | 68 |
ectoderm-derived structure | 4.55e-07 | 171 |
ectoderm | 4.55e-07 | 171 |
presumptive ectoderm | 4.55e-07 | 171 |
neural tube | 4.70e-07 | 56 |
neural rod | 4.70e-07 | 56 |
future spinal cord | 4.70e-07 | 56 |
neural keel | 4.70e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.26e-19 | 143 |
cancer | 2.20e-14 | 235 |
disease of cellular proliferation | 4.91e-14 | 239 |
carcinoma | 5.94e-14 | 106 |
germ cell and embryonal cancer | 6.82e-07 | 22 |
germ cell cancer | 6.82e-07 | 22 |