FFCP PHASE1:Mm9::chr19:55969687..55969714,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21416 | |EntrezGene=21416 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C834 | |UniProt=Q8C834 | ||
|association_with_transcript=-96bp_to_NM_001142924,uc008hyn.2_5end | |association_with_transcript=-96bp_to_NM_001142924,uc008hyn.2_5end | ||
|cluster_id=chr19:55969687..55969714,+ | |||
|description=CAGE_peak_16_at_Tcf7l2_5end | |description=CAGE_peak_16_at_Tcf7l2_5end | ||
|id=chr19:55969687..55969714,+ | |id=chr19:55969687..55969714,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.43e-19,23;CL:0000337,4.43e-19,23;CL:0002613,2.22e-18,3;CL:0000120,1.06e-17,3;CL:0002610,2.95e-17,3;CL:0000540,5.63e-13,33;CL:0000047,5.63e-13,33;CL:0000031,5.63e-13,33;CL:0000404,5.63e-13,33;CL:0000393,8.27e-11,39;CL:0000211,8.27e-11,39;CL:0002319,1.07e-09,43;CL:0000221,1.88e-09,44;CL:0000133,1.88e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.95e-17,3;UBERON:0002275,2.95e-17,3;UBERON:0000369,2.98e-11,5;UBERON:0002435,2.98e-11,5;UBERON:0000204,2.98e-11,5;UBERON:0010082,2.98e-11,5;UBERON:0004121,2.66e-08,95;UBERON:0000924,2.66e-08,95;UBERON:0006601,2.66e-08,95;UBERON:0001017,5.43e-08,73;UBERON:0001016,9.75e-08,75;UBERON:0002420,3.30e-07,8;UBERON:0007245,3.30e-07,8;UBERON:0010009,3.30e-07,8;UBERON:0010011,3.30e-07,8;UBERON:0000454,3.30e-07,8;UBERON:0002259,5.34e-07,1;UBERON:0002314,5.34e-07,1;UBERON:0004061,5.34e-07,1;UBERON:0006777,5.34e-07,1;UBERON:0005882,5.34e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,4.85559506063035,7.40587370980846,6.97214543856797,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0.244981598429908,0,0,5.50579404996943,4.97980618532232,2.91852413186863,19.1235117208781,26.1654660702892,19.7947080811569,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.84183493678809,0,0,0,0,3.53239675751252,0.811206315338788,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,1.08563264870681,1.07435109602823,0.984845398470368,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.486213434136588,0.628839487883947,0.919217542250071,0.888986911206461,1.03017528619447,0.320919209591815,0.505394423527595,0.760437899670719,0.565879024158229,0.187283014939765,0.448176066834085,0.459483751644906,0.476293691283074,0.579421629724277,0,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0,0.872078499793971,0.282328141245992,0.592302255241736,0,0.789209134313529,0.543216455383447,0.561142271657738,0.593175090620871,0.591026894253381,0.409231043169689,0.309873682371932,0,1.49886346762768,0.233931608445408,1.28922632428979,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,4.85559506063035,7.40587370980846,6.97214543856797,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0.244981598429908,0,0,5.50579404996943,4.97980618532232,2.91852413186863,19.1235117208781,26.1654660702892,19.7947080811569,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.84183493678809,0,0,0,0,3.53239675751252,0.811206315338788,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,1.08563264870681,1.07435109602823,0.984845398470368,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.486213434136588,0.628839487883947,0.919217542250071,0.888986911206461,1.03017528619447,0.320919209591815,0.505394423527595,0.760437899670719,0.565879024158229,0.187283014939765,0.448176066834085,0.459483751644906,0.476293691283074,0.579421629724277,0,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0,0.872078499793971,0.282328141245992,0.592302255241736,0,0.789209134313529,0.543216455383447,0.561142271657738,0.593175090620871,0.591026894253381,0.409231043169689,0.309873682371932,0,1.49886346762768,0.233931608445408,1.28922632428979,0,0,0 | ||
|short_description=p16@Tcf7l2 | |short_description=p16@Tcf7l2 | ||
}} | }} |
Latest revision as of 23:57, 25 September 2015
Short description: | p16@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -96bp_to_NM_001142924, uc008hyn.2_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.43e-19 | 23 |
neuroblast (sensu Vertebrata) | 4.43e-19 | 23 |
striatum neuron | 2.22e-18 | 3 |
granule cell | 1.06e-17 | 3 |
raphe nuclei neuron | 2.95e-17 | 3 |
neuron | 5.63e-13 | 33 |
neuronal stem cell | 5.63e-13 | 33 |
neuroblast | 5.63e-13 | 33 |
electrically signaling cell | 5.63e-13 | 33 |
electrically responsive cell | 8.27e-11 | 39 |
electrically active cell | 8.27e-11 | 39 |
neural cell | 1.07e-09 | 43 |
ectodermal cell | 1.88e-09 | 44 |
neurectodermal cell | 1.88e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.95e-17 | 3 |
reticular formation | 2.95e-17 | 3 |
corpus striatum | 2.98e-11 | 5 |
striatum | 2.98e-11 | 5 |
ventral part of telencephalon | 2.98e-11 | 5 |
future corpus striatum | 2.98e-11 | 5 |
ectoderm-derived structure | 2.66e-08 | 95 |
ectoderm | 2.66e-08 | 95 |
presumptive ectoderm | 2.66e-08 | 95 |
central nervous system | 5.43e-08 | 73 |
nervous system | 9.75e-08 | 75 |
basal ganglion | 3.30e-07 | 8 |
nuclear complex of neuraxis | 3.30e-07 | 8 |
aggregate regional part of brain | 3.30e-07 | 8 |
collection of basal ganglia | 3.30e-07 | 8 |
cerebral subcortex | 3.30e-07 | 8 |
corpora quadrigemina | 5.34e-07 | 1 |
midbrain tectum | 5.34e-07 | 1 |
neural tube mantle layer | 5.34e-07 | 1 |
tectal plate | 5.34e-07 | 1 |
neural tube alar plate | 5.34e-07 | 1 |