FFCP PHASE1:Hg19::chr11:65407331..65407354,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6494 | |EntrezGene=6494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10885 | |HGNC=10885 | ||
|TSSclassifier=strong | |||
|UniProt=F6RY50 | |UniProt=F6RY50 | ||
|association_with_transcript=0bp_to_ENST00000527525,uc010rom.1_5end | |association_with_transcript=0bp_to_ENST00000527525,uc010rom.1_5end | ||
|cluster_id=chr11:65407331..65407354,+ | |||
|coexpression_cluster_id=C1134 | |||
|description=CAGE_peak_5_at_SIPA1_5end | |description=CAGE_peak_5_at_SIPA1_5end | ||
|id=chr11:65407331..65407354,+ | |id=chr11:65407331..65407354,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.27e-48!140;CL:0000542!2.96e-45!53;CL:0000051!2.96e-45!53;CL:0000838!2.99e-44!52;CL:0002087!5.92e-44!119;CL:0000037!7.34e-41!172;CL:0000566!7.34e-41!172;CL:0002032!3.21e-37!165;CL:0000837!3.21e-37!165;CL:0000988!4.74e-37!182;CL:0002031!2.93e-36!124;CL:0000791!8.74e-24!18;CL:0000789!8.74e-24!18;CL:0002420!8.74e-24!18;CL:0002419!8.74e-24!18;CL:0000790!8.74e-24!18;CL:0000945!3.90e-22!24;CL:0000826!3.90e-22!24;CL:0000084!6.78e-19!25;CL:0000827!6.78e-19!25;CL:0000236!2.01e-16!14;CL:0000625!9.76e-16!11;CL:0000094!1.41e-12!8;CL:0000766!5.85e-11!76;CL:0002057!1.04e-10!42;CL:0000860!1.48e-09!45;CL:0000624!9.22e-09!6;CL:0000081!1.54e-08!11;CL:0000134!1.02e-07!358;CL:0002320!3.62e-07!365;CL:0000763!6.19e-07!112;CL:0000049!6.19e-07!112 | |ontology_enrichment_celltype=CL:0000738!1.27e-48!140;CL:0000542!2.96e-45!53;CL:0000051!2.96e-45!53;CL:0000838!2.99e-44!52;CL:0002087!5.92e-44!119;CL:0000037!7.34e-41!172;CL:0000566!7.34e-41!172;CL:0002032!3.21e-37!165;CL:0000837!3.21e-37!165;CL:0000988!4.74e-37!182;CL:0002031!2.93e-36!124;CL:0000791!8.74e-24!18;CL:0000789!8.74e-24!18;CL:0002420!8.74e-24!18;CL:0002419!8.74e-24!18;CL:0000790!8.74e-24!18;CL:0000945!3.90e-22!24;CL:0000826!3.90e-22!24;CL:0000084!6.78e-19!25;CL:0000827!6.78e-19!25;CL:0000236!2.01e-16!14;CL:0000625!9.76e-16!11;CL:0000094!1.41e-12!8;CL:0000766!5.85e-11!76;CL:0002057!1.04e-10!42;CL:0000860!1.48e-09!45;CL:0000624!9.22e-09!6;CL:0000081!1.54e-08!11;CL:0000134!1.02e-07!358;CL:0002320!3.62e-07!365;CL:0000763!6.19e-07!112;CL:0000049!6.19e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.82e-36;18!CL:0000789;1.82e-36;18!CL:0002419;1.82e-36;18!CL:0000542;5.98e-35;53!CL:0000084;1.75e-27;25!CL:0000945;2.15e-26;24!CL:0000625;8.41e-24;11!CL:0000236;1.08e-20;13!CL:0000094;7.01e-19;8!CL:0000081;3.03e-13;11!CL:0000624;8.62e-13;6!CL:0002087;1.29e-10;104!CL:0000775;1.52e-08;3!CL:0000623;2.44e-08;3!CL:0000226;7.07e-08;3!CL:0000842;7.07e-08;3!CL:0000738;1.24e-07;136!CL:0000767;1.40e-07;3!CL:0000898;4.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.56e-61,53;CL:0000051,2.56e-61,53;CL:0000838,9.18e-60,52;CL:0000738,3.75e-42,136;CL:0000791,1.54e-36,18;CL:0000789,1.54e-36,18;CL:0002420,1.54e-36,18;CL:0002419,1.54e-36,18;CL:0000790,1.54e-36,18;CL:0002087,3.22e-36,115;CL:0000037,5.07e-31,168;CL:0002032,1.20e-28,161;CL:0000837,1.20e-28,161;CL:0000988,1.27e-28,177;CL:0002031,1.06e-27,120;CL:0000084,1.74e-27,25;CL:0000827,1.74e-27,25;CL:0000945,1.91e-26,24;CL:0000826,1.91e-26,24;CL:0000625,7.63e-24,11;CL:0000236,2.50e-22,14;CL:0000094,7.18e-19,8;CL:0000081,3.08e-13,11;CL:0000624,7.12e-13,6;CL:0000775,1.50e-08,3;CL:0000623,2.41e-08,3;CL:0000825,2.41e-08,3;CL:0000226,7.15e-08,3;CL:0000842,7.15e-08,3;CL:0000767,1.47e-07,3;CL:0000898,3.83e-07,3;CL:0000134,7.47e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;1.82e-36;18!CL:0000051;5.98e-35;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.64e-13!102;UBERON:0003061!1.64e-13!102;UBERON:0002193!7.49e-13!112;UBERON:0000178!7.21e-12!15;UBERON:0000179!7.21e-12!15;UBERON:0000463!7.21e-12!15;UBERON:0004177!8.52e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.58e-18;15!UBERON:0000179;1.58e-18;15!UBERON:0000463;1.58e-18;15!UBERON:0002390;3.58e-12;32!UBERON:0002193;1.67e-08;42!UBERON:0004177;8.33e-07;5!UBERON:0005057;8.33e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.72e-18,15;UBERON:0000179,1.72e-18,15;UBERON:0000463,1.72e-18,15;UBERON:0004177,4.73e-10,7;UBERON:0005057,4.73e-10,7;UBERON:0002370,3.28e-08,4;UBERON:0005058,3.28e-08,4;UBERON:0009113,3.28e-08,4;UBERON:0003295,3.28e-08,4;UBERON:0005562,3.28e-08,4;UBERON:0002193,8.57e-07,108 | |||
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|short_description=p5@SIPA1 | |short_description=p5@SIPA1 | ||
}} | }} |
Latest revision as of 10:29, 19 September 2015
Short description: | p5@SIPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SIPA1_5end |
Coexpression cluster: | C1134_Eosinophils_Neutrophils_CD19_CD8_Natural_CD4_Basophils |
Association with transcript: | 0bp_to_ENST00000527525, uc010rom.1_5end |
EntrezGene: | SIPA1 |
HGNC: | 10885 |
UniProt: | F6RY50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.56e-61 | 53 |
common lymphoid progenitor | 2.56e-61 | 53 |
lymphoid lineage restricted progenitor cell | 9.18e-60 | 52 |
leukocyte | 3.75e-42 | 136 |
mature alpha-beta T cell | 1.54e-36 | 18 |
alpha-beta T cell | 1.54e-36 | 18 |
immature T cell | 1.54e-36 | 18 |
mature T cell | 1.54e-36 | 18 |
immature alpha-beta T cell | 1.54e-36 | 18 |
nongranular leukocyte | 3.22e-36 | 115 |
hematopoietic stem cell | 5.07e-31 | 168 |
hematopoietic oligopotent progenitor cell | 1.20e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-28 | 161 |
hematopoietic cell | 1.27e-28 | 177 |
hematopoietic lineage restricted progenitor cell | 1.06e-27 | 120 |
T cell | 1.74e-27 | 25 |
pro-T cell | 1.74e-27 | 25 |
lymphocyte of B lineage | 1.91e-26 | 24 |
pro-B cell | 1.91e-26 | 24 |
CD8-positive, alpha-beta T cell | 7.63e-24 | 11 |
B cell | 2.50e-22 | 14 |
granulocyte | 7.18e-19 | 8 |
blood cell | 3.08e-13 | 11 |
CD4-positive, alpha-beta T cell | 7.12e-13 | 6 |
neutrophil | 1.50e-08 | 3 |
natural killer cell | 2.41e-08 | 3 |
pro-NK cell | 2.41e-08 | 3 |
single nucleate cell | 7.15e-08 | 3 |
mononuclear cell | 7.15e-08 | 3 |
basophil | 1.47e-07 | 3 |
naive T cell | 3.83e-07 | 3 |
mesenchymal cell | 7.47e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
blood | 1.72e-18 | 15 |
haemolymphatic fluid | 1.72e-18 | 15 |
organism substance | 1.72e-18 | 15 |
hemopoietic organ | 4.73e-10 | 7 |
immune organ | 4.73e-10 | 7 |
thymus | 3.28e-08 | 4 |
hemolymphoid system gland | 3.28e-08 | 4 |
thymic region | 3.28e-08 | 4 |
pharyngeal gland | 3.28e-08 | 4 |
thymus primordium | 3.28e-08 | 4 |
hemolymphoid system | 8.57e-07 | 108 |