FFCP PHASE1:Hg19::chr11:65384046..65384063,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:65384046..65384063,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr11:65384046..65384063,- | |description=CAGE_peak_at_chr11:65384046..65384063,- | ||
|id=chr11:65384046..65384063,- | |id=chr11:65384046..65384063,- | ||
|ontology_enrichment_celltype=CL:0000181!4.86e-14!12;CL:0000417!4.86e-14!12;CL:0000668!4.86e-14!12;CL:0000414!4.86e-14!12;CL:0000412!4.86e-14!12;CL:0000182!4.86e-14!12;CL:0000223!1.15e-07!59 | |ontology_enrichment_celltype=CL:0000181!4.86e-14!12;CL:0000417!4.86e-14!12;CL:0000668!4.86e-14!12;CL:0000414!4.86e-14!12;CL:0000412!4.86e-14!12;CL:0000182!4.86e-14!12;CL:0000223!1.15e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.03e-44;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.03e-44,12;CL:0000223,1.02e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.24e-48;11!UBERON:0009497;4.54e-41;13!UBERON:0001041;3.13e-18;30!UBERON:0003104;1.77e-17;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;3.45e-13;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,3.56e-14,39 | |||
|ontology_enrichment_uberon=UBERON:0005409!7.09e-13!35;UBERON:0000160!1.74e-12!27;UBERON:0000997!6.00e-11!1;UBERON:0005056!6.00e-11!1;UBERON:0004921!2.72e-09!129;UBERON:0004185!2.72e-09!129;UBERON:0002107!6.20e-09!19;UBERON:0006925!6.20e-09!19;UBERON:0008836!6.20e-09!19;UBERON:0008835!9.83e-08!22;UBERON:0003894!9.83e-08!22;UBERON:0001007!1.98e-07!155;UBERON:0001555!1.98e-07!155;UBERON:0007026!1.98e-07!155;UBERON:0009854!2.11e-07!23;UBERON:0007499!8.07e-07!25;UBERON:0009497!8.07e-07!25;UBERON:0000015!8.07e-07!25;UBERON:0002423!8.07e-07!25;UBERON:0006235!8.07e-07!25;UBERON:0004161!8.07e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-28;19!UBERON:0006925;2.32e-28;19!UBERON:0002423;9.78e-22;25!UBERON:0002365;1.00e-16;31!UBERON:0002330;1.00e-16;31!UBERON:0002368;3.19e-15;33!UBERON:0000949;1.40e-11;43!UBERON:0002108;7.25e-08;4!UBERON:0002417;1.05e-07;58!UBERON:0000916;1.05e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-28,19;UBERON:0006925,2.32e-28,19;UBERON:0008836,2.32e-28,19;UBERON:0008835,1.34e-24,22;UBERON:0003894,1.34e-24,22;UBERON:0009854,1.46e-23,23;UBERON:0007499,9.78e-22,25;UBERON:0009497,9.78e-22,25;UBERON:0000015,9.78e-22,25;UBERON:0002423,9.78e-22,25;UBERON:0006235,9.78e-22,25;UBERON:0004161,9.78e-22,25;UBERON:0009856,6.29e-21,26;UBERON:0002365,1.15e-17,31;UBERON:0002330,1.15e-17,31;UBERON:0002368,1.01e-15,35;UBERON:0000949,2.30e-12,45;UBERON:0003929,2.12e-10,54;UBERON:0005172,2.12e-10,54;UBERON:0005173,2.12e-10,54;UBERON:0002530,1.45e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0002108,7.49e-08,4;UBERON:0004921,2.22e-07,118;UBERON:0005911,5.11e-07,82 | |||
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|short_description=p@chr11:65384046..65384063,- | |short_description=p@chr11:65384046..65384063,- | ||
}} | }} |
Latest revision as of 00:44, 24 July 2015
Short description: | p@chr11:65384046..65384063, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65384046..65384063, - |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.03e-44 | 12 |
endodermal cell | 1.02e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-28 | 19 |
digestive gland | 2.32e-28 | 19 |
liver bud | 2.32e-28 | 19 |
hepatic diverticulum | 1.34e-24 | 22 |
liver primordium | 1.34e-24 | 22 |
digestive tract diverticulum | 1.46e-23 | 23 |
epithelial sac | 9.78e-22 | 25 |
epithelium of foregut-midgut junction | 9.78e-22 | 25 |
anatomical boundary | 9.78e-22 | 25 |
hepatobiliary system | 9.78e-22 | 25 |
foregut-midgut junction | 9.78e-22 | 25 |
septum transversum | 9.78e-22 | 25 |
sac | 6.29e-21 | 26 |
exocrine gland | 1.15e-17 | 31 |
exocrine system | 1.15e-17 | 31 |
endocrine gland | 1.01e-15 | 35 |
endocrine system | 2.30e-12 | 45 |
gut epithelium | 2.12e-10 | 54 |
abdomen element | 2.12e-10 | 54 |
abdominal segment element | 2.12e-10 | 54 |
gland | 1.45e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
small intestine | 7.49e-08 | 4 |
subdivision of digestive tract | 2.22e-07 | 118 |
endo-epithelium | 5.11e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.56e-14 | 39 |