FFCP PHASE1:Hg19::chr11:64578188..64578223,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4221 | |EntrezGene=4221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7010 | |HGNC=7010 | ||
|TSSclassifier=strong | |||
|UniProt=O00255,Q9GZQ5 | |UniProt=O00255,Q9GZQ5 | ||
|association_with_transcript=0bp_to_ENST00000312049,ENST00000315422,ENST00000394374,ENST00000443283,NM_000244,NM_130799,NM_130802,uc001obm.2,uc001obn.2,uc001obo.2,uc001obp.2_5end | |association_with_transcript=0bp_to_ENST00000312049,ENST00000315422,ENST00000394374,ENST00000443283,NM_000244,NM_130799,NM_130802,uc001obm.2,uc001obn.2,uc001obo.2,uc001obp.2_5end | ||
|cluster_id=chr11:64578188..64578223,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_MEN1_5end | |description=CAGE_peak_3_at_MEN1_5end | ||
|id=chr11:64578188..64578223,- | |id=chr11:64578188..64578223,- | ||
|ontology_enrichment_celltype=CL:0000542!6.74e-25!53;CL:0000051!6.74e-25!53;CL:0000838!1.22e-24!52;CL:0000738!1.98e-22!140;CL:0000037!1.95e-21!172;CL:0000566!1.95e-21!172;CL:0000988!3.30e-21!182;CL:0002087!8.39e-20!119;CL:0002032!2.03e-19!165;CL:0000837!2.03e-19!165;CL:0002031!6.95e-19!124;CL:0000084!9.74e-15!25;CL:0000827!9.74e-15!25;CL:0000791!2.73e-12!18;CL:0000789!2.73e-12!18;CL:0002420!2.73e-12!18;CL:0002419!2.73e-12!18;CL:0000790!2.73e-12!18;CL:0000945!1.83e-09!24;CL:0000826!1.83e-09!24;CL:0000625!1.57e-08!11 | |ontology_enrichment_celltype=CL:0000542!6.74e-25!53;CL:0000051!6.74e-25!53;CL:0000838!1.22e-24!52;CL:0000738!1.98e-22!140;CL:0000037!1.95e-21!172;CL:0000566!1.95e-21!172;CL:0000988!3.30e-21!182;CL:0002087!8.39e-20!119;CL:0002032!2.03e-19!165;CL:0000837!2.03e-19!165;CL:0002031!6.95e-19!124;CL:0000084!9.74e-15!25;CL:0000827!9.74e-15!25;CL:0000791!2.73e-12!18;CL:0000789!2.73e-12!18;CL:0002420!2.73e-12!18;CL:0002419!2.73e-12!18;CL:0000790!2.73e-12!18;CL:0000945!1.83e-09!24;CL:0000826!1.83e-09!24;CL:0000625!1.57e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;3.56e-31;25!CL:0000791;5.19e-27;18!CL:0000789;5.19e-27;18!CL:0002419;5.19e-27;18!CL:0000542;1.05e-24;53!CL:0000625;5.04e-20;11!CL:0000945;7.46e-13;24!CL:0000236;1.44e-11;13!CL:0002087;2.79e-08;104!CL:0000624;1.42e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.75e-46,52;CL:0000542,3.58e-45,53;CL:0000051,3.58e-45,53;CL:0000084,2.69e-31,25;CL:0000827,2.69e-31,25;CL:0000791,3.44e-27,18;CL:0000789,3.44e-27,18;CL:0002420,3.44e-27,18;CL:0002419,3.44e-27,18;CL:0000790,3.44e-27,18;CL:0002087,1.76e-25,115;CL:0000738,5.21e-25,136;CL:0000037,6.57e-23,168;CL:0000988,6.98e-22,177;CL:0002031,2.45e-21,120;CL:0000625,6.90e-20,11;CL:0002032,2.74e-19,161;CL:0000837,2.74e-19,161;CL:0000236,4.55e-13,14;CL:0000945,5.73e-13,24;CL:0000826,5.73e-13,24;CL:0000624,1.06e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;5.19e-27;18!CL:0000051;1.05e-24;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.46e-10!15;UBERON:0000179!5.46e-10!15;UBERON:0000463!5.46e-10!15;UBERON:0002390!2.70e-09!102;UBERON:0003061!2.70e-09!102;UBERON:0002193!2.45e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.01e-19;15!UBERON:0000179;2.01e-19;15!UBERON:0000463;2.01e-19;15!UBERON:0002390;1.42e-17;32!UBERON:0002193;3.78e-11;42!UBERON:0004177;7.59e-07;5!UBERON:0005057;7.59e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.78e-20,15;UBERON:0000179,9.78e-20,15;UBERON:0000463,9.78e-20,15;UBERON:0004177,3.70e-10,7;UBERON:0005057,3.70e-10,7;UBERON:0002370,6.90e-09,4;UBERON:0005058,6.90e-09,4;UBERON:0009113,6.90e-09,4;UBERON:0003295,6.90e-09,4;UBERON:0005562,6.90e-09,4;UBERON:0002390,7.22e-09,98;UBERON:0003061,7.22e-09,98;UBERON:0002193,7.70e-09,108 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0,0,0.376627918784408,0.916960868975415,1.47781061009902,1.18066171970519,2.36018566109342,0.767658796194425,1.08371286321253,0,0.30120591877825,0.369754010166788,0.387336002901508,0.853015394924529,1.17440175733939,1.66198622559563,0.401088894940283,1.95309783644267,0.223915474239924,1.6194683300949,0.77272670290256,0.581592955118259,0,0.485168122375632,0.232429036905685,0,0.619412741790207,0,0,0.236482229888585,0.344745680736619,0,1.35426486594342,0.564727018627814,0.272906150057846,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0.502497330513487,0,0,0,0.368277635987565,0,0,0.637812899895131,0.419317291016752,0.336985893439485,0.450530678524519,0.32145117339416,1.42506371870624,1.39241674039363,0.91332076882317,1.75996244461323,1.09227722252426,1.77901850772711,1.70692089026603,0.400395987036012,2.29900975981793,1.98313461835459,1.90810750907073,1.1384259382189,0,0,0,0.560508562981536,0.263384084775077,1.96709770113833,1.96505381374582,1.02800749499755,2.34061093546949,0.651844533267181,1.89379122293893,5.84480185223734,3.56513462032555,2.3568472597987,1.32920336750173,2.97884250141517,3.20228299314188,2.60118695119756,1.15106533222573,3.86890024900188,2.31842468588042,2.66915813691709,1.33770414044857,3.1360657141493,3.51258962362455,3.06576394881537,4.46715679127419,4.30133476433155,3.18565414324097,1.30216690771284,3.8018081777935,3.46322773878877,2.8157054453972,1.24930726552346,4.2619905367923,2.46338399076314,2.01606743224732,3.4767225451856,1.73789284659359,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.523916301990851,0.364295288292542,0,0,0.522389211897802,0.664789802594326,0.715471872916026,0,0.371457501329565,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0,0,1.52054421143703,0.24406205754817,0,0.81014194788176,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0.709336764396714,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.368502951935304,0.206651562351531,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0,0.504867548488229,0.184099797284599,0,0.355009592516614,0,0,0.57978255948989,0.545492241181669,0.573609190778008,0.243947412259191,0.265059536642971,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0.337169380156203,0.482022059766964,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,2.6487785964879,0,0.171567810298526,0.329250856225877,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0,0,0.790204397959275,0.858486162094873,0.246217006087397,0.702012795417713,0.297262324577456,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0.766765358330422,0.985326475791887,1.49682337822484,0.621984346622316,0.864719720501769,0.37872730027914,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.22001485746285,0.129271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.358121926479791,1.79336230389644,2.36436912242313,2.58753089831421,2.18183161675572,0.254094624222463,0,0,0.502548796003046,1.27587750330633,0.749007023947182,0,0.414415513436035,0.24538298343828,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0,0.601892199455438,0,0,0,0,0,0.195801157462741,0.343143423810856,2.68798433959754,1.07857100409308,1.921096040462,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0.154209693802656,0,0.246381468041427,0,0.116210378459959,0.241718899183244,0.200506470303285,0.736647911487171,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0,0,0,0.515205058238611,0,0.082509499920588,0,0,0,0,0,0,0,0,0.290033387828457,0.170453254832202,0.0890320356467374,0.165284915360978,0.384380134730212,0.127612712494584,0.50578890427775,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,0,0.316379424718726,0,0.511795582622668,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0,0.379473173765715,0.349934720244983,0.0962221127255121,1.34060455107157,0,0.470719003883896,0,1.68471475667626,0,0,5.58192370155386,3.82318603571188,1.70894156152249,3.33524485640905,1.64544909234478,3.8908398671563,2.70015718619057,3.17250070517708,0,0,0.245040215981032,0.557409525377156,1.44269212976445,1.63626239701352,2.07254154547469,0.798317485731266,0.957526850661834,0.846694330895531,0,0.561594356226918,0,0.313359791546046,0,0.50787533340481,1.445292675933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| ||
|short_description=p3@MEN1 | |short_description=p3@MEN1 | ||
}} | }} |
Latest revision as of 04:46, 19 September 2015
Short description: | p3@MEN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MEN1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000312049, ENST00000315422, ENST00000394374, ENST00000443283, NM_000244, NM_130799, NM_130802, uc001obm.2, uc001obn.2, uc001obo.2, uc001obp.2_5end |
EntrezGene: | MEN1 |
HGNC: | 7010 |
UniProt: | O00255Q9GZQ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.75e-46 | 52 |
lymphocyte | 3.58e-45 | 53 |
common lymphoid progenitor | 3.58e-45 | 53 |
T cell | 2.69e-31 | 25 |
pro-T cell | 2.69e-31 | 25 |
mature alpha-beta T cell | 3.44e-27 | 18 |
alpha-beta T cell | 3.44e-27 | 18 |
immature T cell | 3.44e-27 | 18 |
mature T cell | 3.44e-27 | 18 |
immature alpha-beta T cell | 3.44e-27 | 18 |
nongranular leukocyte | 1.76e-25 | 115 |
leukocyte | 5.21e-25 | 136 |
hematopoietic stem cell | 6.57e-23 | 168 |
hematopoietic cell | 6.98e-22 | 177 |
hematopoietic lineage restricted progenitor cell | 2.45e-21 | 120 |
CD8-positive, alpha-beta T cell | 6.90e-20 | 11 |
hematopoietic oligopotent progenitor cell | 2.74e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.74e-19 | 161 |
B cell | 4.55e-13 | 14 |
lymphocyte of B lineage | 5.73e-13 | 24 |
pro-B cell | 5.73e-13 | 24 |
CD4-positive, alpha-beta T cell | 1.06e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 9.78e-20 | 15 |
haemolymphatic fluid | 9.78e-20 | 15 |
organism substance | 9.78e-20 | 15 |
hemopoietic organ | 3.70e-10 | 7 |
immune organ | 3.70e-10 | 7 |
thymus | 6.90e-09 | 4 |
hemolymphoid system gland | 6.90e-09 | 4 |
thymic region | 6.90e-09 | 4 |
pharyngeal gland | 6.90e-09 | 4 |
thymus primordium | 6.90e-09 | 4 |
hematopoietic system | 7.22e-09 | 98 |
blood island | 7.22e-09 | 98 |
hemolymphoid system | 7.70e-09 | 108 |