Personal tools

FFCP PHASE1:Mm9::chr19:10651929..10651951,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=225912
|EntrezGene=225912
|HGNC=
|HGNC=
|MCL_coexpression_id=165
|TSSclassifier=NA
|UniProt=Q6P1H1
|UniProt=Q6P1H1
|association_with_transcript=0bp_to_ENSMUST00000099694,ENSMUST00000099695,ENSMUST00000168445,uc008gqg.1_5end
|association_with_transcript=0bp_to_ENSMUST00000099694,ENSMUST00000099695,ENSMUST00000168445,uc008gqg.1_5end
|cluster_id=chr19:10651929..10651951,+
|description=CAGE_peak_1_at_Cybasc3_5end
|description=CAGE_peak_1_at_Cybasc3_5end
|id=chr19:10651929..10651951,+
|id=chr19:10651929..10651951,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!1.09e-10!70;UBERON:0004119!4.04e-10!130;UBERON:0000925!4.04e-10!130;UBERON:0006595!4.04e-10!130;UBERON:0004923!4.79e-10!24;UBERON:0001007!2.36e-09!128;UBERON:0001555!2.36e-09!128;UBERON:0007026!2.36e-09!128;UBERON:0002204!2.91e-09!32;UBERON:0000490!7.50e-09!66;UBERON:0004921!1.42e-08!126;UBERON:0004185!1.42e-08!126;UBERON:0002193!4.73e-08!48;UBERON:0005911!2.16e-07!69;UBERON:0003104!4.68e-07!131;UBERON:0009142!4.68e-07!131
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.39e-12,118;UBERON:0000925,3.39e-12,118;UBERON:0006595,3.39e-12,118;UBERON:0001007,2.41e-11,116;UBERON:0001555,2.41e-11,116;UBERON:0007026,2.41e-11,116;UBERON:0004921,1.80e-10,114;UBERON:0004923,4.79e-10,24;UBERON:0002204,2.91e-09,32;UBERON:0000490,7.50e-09,66;UBERON:0002193,4.73e-08,48;UBERON:0002405,4.73e-08,48;UBERON:0005911,2.16e-07,69
|phase1_expression=8.16759120234449,26.8711063882308,34.5799421936047,16.6355316218757,24.0429950374247,24.342494427224,21.0251376535973,14.2035655785734,3.37892933164,2.80877431586392,3.25314139628459,2.6324812468461,12.6688540149092,12.1514359362406,22.3183540416494,29.7638643063044,9.09430441566591,161.516628663418,150.688762532707,164.663184897636,11.2257142999412,61.0639349885445,58.7699525562605,30.3985603307473,41.2936705920906,42.4931653445115,37.0455316696804,31.4587999721398,20.5225293012884,19.9103802510345,28.6032358745343,3.17515336729816,3.07532393792285,0,9.24325183204079,14.4624141461888,8.98345167554424,81.613667993697,64.8508335954754,83.2402752918339,97.0581955251174,90.1620040145148,95.1600291941061,15.7371022469472,19.4643707941468,16.702754446713,23.4717403304412,7.84890562969608,13.6205433295373,10.4992145500113,9.23910382727393,17.2503077237966,92.6159985438705,10.1550699881588,9.41062637598899,16.9791227783725,29.7994777536307,33.5186859980338,4.24864567805155,4.23192783417626,7.60597684207415,14.2314703469035,11.5608323494448,11.2487464660175,14.8329954385046,23.4458437932213,15.8788058574755,19.5951335713993,3.83651565541367,5.13022565660425,4.20649922702764,6.85562362569129,3.53389665522582,3.55223317723367,5.07980996396653,5.51531271966013,3.30347642998166,3.95830748064082,4.45458946443106,5.14356522147756,5.30628332893976,5.73004707612436,6.70039197603314,6.19038871034848,4.73674568108111,4.41942878210502,5.69486723196412,7.64237727883732,5.75519069332199,12.5448789777264,16.8121403446973,21.5105969245347,6.79971333707751,18.8896117073236,13.6453047664011,9.85659151614138,11.7973312910672,17.0430322578058,12.7295142255406,15.1936017039446,9.43650912503759,10.2661181931454,7.64415719119937,14.2213340630666,8.01016851741492,9.37431502257865,8.08839112023653,12.7885945285347,59.2967753552023,13.0629082377046,6.59244241711316,8.52503339273995,8.76338889573022,8.89263579260473,8.34879820663504,10.4303270803631,30.1577860635936,10.4111536982336,30.0767587662957,11.1619126463712,19.8757366614354,23.2740121504907,24.2309289583559,2.92780797011547,5.02672096352292,17.3710797541842,16.7741174308288,10.1983464268879,13.3423738426718,7.33974133083631,4.57500602818627,4.90051973240171,6.77914848749878,6.13717097592793,4.57133698031032,6.32740925964255,9.980257657331,27.8671614166608,6.57079171927554,7.99679052368601,3.90361328888111,6.66716102857071,2.88099407688559,6.63101198477146,7.48401490664606,7.30248205623644,7.02762934197966,8.79591460512653,5.6047678162539,5.67318240503458,5.10258260075452,5.69908904311695,7.50727572909114,7.66154766348766,7.40815691068596,5.7719937377363,8.42655824775882,8.23513302767089,14.2081749697796,4.14251545071004,5.39409937956521,5.22179978236943,6.15536312521547,6.68998387941173,7.40482141859416,6.0458825635106,7.24338183778972,7.58974725386602,5.26591519723137,8.53670813211295,9.24184428822755,10.2339991197733,7.68425403518677,10.7365135008297,7.78072809687271,4.83651678182637,23.1293148088659,9.25576983322405,4.05247676016945,3.71578674976702,4.76809606891745,5.64713868945359,8.45036566610507,15.0278244628922,11.3886974770683,12.5171205590248,18.3474702424197,18.7019083718682,17.1568396664826,11.6846523125049,18.1555961894743,15.5330193138406,4.1726938209678,4.45569199177942,4.50830942692322,6.31319116320474,7.5641469995374,5.54072977133517,11.6987593679876,9.00421902675573,13.815888050041,16.9054114572867,15.7119892356189,2.66952169145751,5.11053387294328,5.62155280962134,8.72298521970563,17.1235783424216,16.8053062175737,16.686375972147,15.7271169971784,17.8464918572253,21.5652309791032,21.9563159124417,30.8917296383415,25.0053089167641,13.0960111870996,19.7801843758981,38.9829231251536,3.7898282354097,6.02970412835496,4.75286240170527,7.27539769694356,10.7204004762762,14.7587057349329,16.5863600679129,22.0689201748667,21.2606102062824,29.4991322016351,39.4910588464929,42.3078205571444,50.9164686206921,19.6028669121054,12.5098307278303,8.85175691434265,14.9005843004556,8.0275294993896,5.86058432961016,7.37707254195039,7.57412781613119,5.99465616890888,3.90438744296638,5.60100834105277,6.93009514062401,7.79795359288379,6.79383673893198,3.64329631507405,5.55286130031493,4.34816555741176,3.85585579706168,11.4971469018698,10.5058706163681,8.47012188638596,9.56826713240706,9.2921596837974,4.61283208694465,6.65111825322452,6.78978287121233,7.97315110778086,5.22639751504677,6.71913562237375,6.18007340111759,8.55593708123331,12.3254335594968,10.5418608574999,5.15677716240934,6.12791290356818,7.38250485528372,5.43306471887569,7.07312215604255,4.78818630834139,8.20496560969525,6.58196082408484,7.61162372786498,23.7018425144347,38.1297727554876,8.38007912608855,6.26567761177624,8.07322133479528,9.04693873922338,8.59480876822583,9.02774948597837,18.6547735443104,5.93360966433631,40.3255278682932,11.3512777379772,14.2599786074678,29.9505846637459,44.6990124647752,52.3902016642937,13.5982743995084,16.2343684695443,17.4131966993574,13.3653886522116,3.00519193902079,5.69294507955176,6.80433647177348,5.22720740036172,7.20596460362386,9.03591120778299,11.7367907129977,14.9200886930897,13.9984171155136,11.8054469486516,0.56369293868419,4.63501292736334,4.79829622325583,5.25018208528929,5.42471258606471,9.12363077650202,6.45464812551647,7.81226309063701,6.60613869881978,4.1069300540421,8.06484017522023,19.9087005995752,9.32535990334755,11.4009162452958,13.6416864126685,13.7850555663961,11.9208812868759,15.264822089036,17.7227432609493,12.6208062435185,15.39377494431,16.5354943624418,17.2500448909362,15.5863183457334,22.3234883166797,6.34845074122592,5.10567692760349,5.56225910978749,6.71538465456314,10.4322380777383,13.5131382324851,12.0880072016395,12.6477343656649,14.5455910170255,3.3885110557024,1.38097570952153,5.72895513439397,6.70227411140382,2.74033007908257,3.0215755895588,3.37511250115903,5.40385443869065,3.17199686288943,6.21312374102184,2.49089634202024,2.79317411380722,4.60980735536162,6.80698807791223,4.82110274044359,4.22840069435032,8.44537565646138,5.15087643097235,5.77654577265267,8.08631077644152,5.0695859978048,6.22466926574051,7.77224512000024,7.61899313617944,7.69635284005218,2.38146845641537,9.73428337936786,7.90927803901191,7.00546031365621,7.06554816645107,6.85738504770831,7.27650805253284,7.15308569841963,9.1568242478367,8.37573485696442,8.03838774970927,7.86590283352922,7.62902163169744,6.51859746460137,7.2948495315506,6.4062909787054,9.1609168609274,4.91077251803627,8.98633678878603,7.9091710502268,7.24450676020043,10.5269223800434,8.80971321598023,4.20834330551455,12.3531194706929,10.8977882741598
|phase1_expression=8.16759120234449,26.8711063882308,34.5799421936047,16.6355316218757,24.0429950374247,24.342494427224,21.0251376535973,14.2035655785734,3.37892933164,2.80877431586392,3.25314139628459,2.6324812468461,12.6688540149092,12.1514359362406,22.3183540416494,29.7638643063044,9.09430441566591,161.516628663418,150.688762532707,164.663184897636,11.2257142999412,61.0639349885445,58.7699525562605,30.3985603307473,41.2936705920906,42.4931653445115,37.0455316696804,31.4587999721398,20.5225293012884,19.9103802510345,28.6032358745343,3.17515336729816,3.07532393792285,0,9.24325183204079,14.4624141461888,8.98345167554424,81.613667993697,64.8508335954754,83.2402752918339,97.0581955251174,90.1620040145148,95.1600291941061,15.7371022469472,19.4643707941468,16.702754446713,23.4717403304412,7.84890562969608,13.6205433295373,10.4992145500113,9.23910382727393,17.2503077237966,92.6159985438705,10.1550699881588,9.41062637598899,16.9791227783725,29.7994777536307,33.5186859980338,4.24864567805155,4.23192783417626,7.60597684207415,14.2314703469035,11.5608323494448,11.2487464660175,14.8329954385046,23.4458437932213,15.8788058574755,19.5951335713993,3.83651565541367,5.13022565660425,4.20649922702764,6.85562362569129,3.53389665522582,3.55223317723367,5.07980996396653,5.51531271966013,3.30347642998166,3.95830748064082,4.45458946443106,5.14356522147756,5.30628332893976,5.73004707612436,6.70039197603314,6.19038871034848,4.73674568108111,4.41942878210502,5.69486723196412,7.64237727883732,5.75519069332199,12.5448789777264,16.8121403446973,21.5105969245347,6.79971333707751,18.8896117073236,13.6453047664011,9.85659151614138,11.7973312910672,17.0430322578058,12.7295142255406,15.1936017039446,9.43650912503759,10.2661181931454,7.64415719119937,14.2213340630666,8.01016851741492,9.37431502257865,8.08839112023653,12.7885945285347,59.2967753552023,13.0629082377046,6.59244241711316,8.52503339273995,8.76338889573022,8.89263579260473,8.34879820663504,10.4303270803631,30.1577860635936,10.4111536982336,30.0767587662957,11.1619126463712,19.8757366614354,23.2740121504907,24.2309289583559,2.92780797011547,5.02672096352292,17.3710797541842,16.7741174308288,10.1983464268879,13.3423738426718,7.33974133083631,4.57500602818627,4.90051973240171,6.77914848749878,6.13717097592793,4.57133698031032,6.32740925964255,9.980257657331,27.8671614166608,6.57079171927554,7.99679052368601,3.90361328888111,6.66716102857071,2.88099407688559,6.63101198477146,7.48401490664606,7.30248205623644,7.02762934197966,8.79591460512653,5.6047678162539,5.67318240503458,5.10258260075452,5.69908904311695,7.50727572909114,7.66154766348766,7.40815691068596,5.7719937377363,8.42655824775882,8.23513302767089,14.2081749697796,4.14251545071004,5.39409937956521,5.22179978236943,6.15536312521547,6.68998387941173,7.40482141859416,6.0458825635106,7.24338183778972,7.58974725386602,5.26591519723137,8.53670813211295,9.24184428822755,10.2339991197733,7.68425403518677,10.7365135008297,7.78072809687271,4.83651678182637,23.1293148088659,9.25576983322405,4.05247676016945,3.71578674976702,4.76809606891745,5.64713868945359,8.45036566610507,15.0278244628922,11.3886974770683,12.5171205590248,18.3474702424197,18.7019083718682,17.1568396664826,11.6846523125049,18.1555961894743,15.5330193138406,4.1726938209678,4.45569199177942,4.50830942692322,6.31319116320474,7.5641469995374,5.54072977133517,11.6987593679876,9.00421902675573,13.815888050041,16.9054114572867,15.7119892356189,2.66952169145751,5.11053387294328,5.62155280962134,8.72298521970563,17.1235783424216,16.8053062175737,16.686375972147,15.7271169971784,17.8464918572253,21.5652309791032,21.9563159124417,30.8917296383415,25.0053089167641,13.0960111870996,19.7801843758981,38.9829231251536,3.7898282354097,6.02970412835496,4.75286240170527,7.27539769694356,10.7204004762762,14.7587057349329,16.5863600679129,22.0689201748667,21.2606102062824,29.4991322016351,39.4910588464929,42.3078205571444,50.9164686206921,19.6028669121054,12.5098307278303,8.85175691434265,14.9005843004556,8.0275294993896,5.86058432961016,7.37707254195039,7.57412781613119,5.99465616890888,3.90438744296638,5.60100834105277,6.93009514062401,7.79795359288379,6.79383673893198,3.64329631507405,5.55286130031493,4.34816555741176,3.85585579706168,11.4971469018698,10.5058706163681,8.47012188638596,9.56826713240706,9.2921596837974,4.61283208694465,6.65111825322452,6.78978287121233,7.97315110778086,5.22639751504677,6.71913562237375,6.18007340111759,8.55593708123331,12.3254335594968,10.5418608574999,5.15677716240934,6.12791290356818,7.38250485528372,5.43306471887569,7.07312215604255,4.78818630834139,8.20496560969525,6.58196082408484,7.61162372786498,23.7018425144347,38.1297727554876,8.38007912608855,6.26567761177624,8.07322133479528,9.04693873922338,8.59480876822583,9.02774948597837,18.6547735443104,5.93360966433631,40.3255278682932,11.3512777379772,14.2599786074678,29.9505846637459,44.6990124647752,52.3902016642937,13.5982743995084,16.2343684695443,17.4131966993574,13.3653886522116,3.00519193902079,5.69294507955176,6.80433647177348,5.22720740036172,7.20596460362386,9.03591120778299,11.7367907129977,14.9200886930897,13.9984171155136,11.8054469486516,0.56369293868419,4.63501292736334,4.79829622325583,5.25018208528929,5.42471258606471,9.12363077650202,6.45464812551647,7.81226309063701,6.60613869881978,4.1069300540421,8.06484017522023,19.9087005995752,9.32535990334755,11.4009162452958,13.6416864126685,13.7850555663961,11.9208812868759,15.264822089036,17.7227432609493,12.6208062435185,15.39377494431,16.5354943624418,17.2500448909362,15.5863183457334,22.3234883166797,6.34845074122592,5.10567692760349,5.56225910978749,6.71538465456314,10.4322380777383,13.5131382324851,12.0880072016395,12.6477343656649,14.5455910170255,3.3885110557024,1.38097570952153,5.72895513439397,6.70227411140382,2.74033007908257,3.0215755895588,3.37511250115903,5.40385443869065,3.17199686288943,6.21312374102184,2.49089634202024,2.79317411380722,4.60980735536162,6.80698807791223,4.82110274044359,4.22840069435032,8.44537565646138,5.15087643097235,5.77654577265267,8.08631077644152,5.0695859978048,6.22466926574051,7.77224512000024,7.61899313617944,7.69635284005218,2.38146845641537,9.73428337936786,7.90927803901191,7.00546031365621,7.06554816645107,6.85738504770831,7.27650805253284,7.15308569841963,9.1568242478367,8.37573485696442,8.03838774970927,7.86590283352922,7.62902163169744,6.51859746460137,7.2948495315506,6.4062909787054,9.1609168609274,4.91077251803627,8.98633678878603,7.9091710502268,7.24450676020043,10.5269223800434,8.80971321598023,4.20834330551455,12.3531194706929,10.8977882741598
|short_description=p1@Cybasc3
|short_description=p1@Cybasc3
}}
}}

Latest revision as of 20:40, 1 October 2015

Short description:p1@Cybasc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cybasc3_5end
Coexpression cluster:MCL_coexpression_mm9:165
Association with transcript: 0bp_to_ENSMUST00000099694, ENSMUST00000099695, ENSMUST00000168445, uc008gqg.1_5end
EntrezGene:Cybasc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cybasc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I526.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I634.58
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.64
CD326+ enterocyte, pool2.CNhs13197.11849-124I424.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I821.03
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.63
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E412.67
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A122.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A329.76
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2161.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4150.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6164.66
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H261.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I958.77
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D130.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D241.29
GP2+ M cell, pool1.CNhs13228.11845-124H942.49
GP2+ M cell, pool2.CNhs13231.11846-124I137.05
GP2+ M cell, pool3.CNhs13240.11847-124I231.46
Ileum epithelium, pool1.CNhs13199.10252-104B920.52
Ileum epithelium, pool2.CNhs13232.10253-104C119.91
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C828.60
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G881.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H164.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H383.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G997.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H290.16
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H495.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.46
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.70
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B723.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.62
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A292.62
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E129.80
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C533.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.23
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E714.83
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D223.45
Mouse Microglia, donor1.CNhs12629.11718-123C815.88
Mouse Microglia, donor2.CNhs12634.11736-123E819.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D95.76
Mouse Schwann, donor2.CNhs12573.11746-123F912.54
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.81
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.89
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.44
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.79
accessory axillary lymph node, adult.CNhs10475.1063-29H959.30
adrenal gland, adult.CNhs10508.49-24D713.06
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I18.76
adrenal gland, embryo E18.CNhs11026.1262-18F58.89
adrenal gland, neonate N00.CNhs11191.1311-23C18.35
adrenal gland, neonate N25.CNhs11223.1377-27I310.43
amnion, adult pregnant day17.5.CNhs10488.583-22A830.16
aorta, adult.CNhs10498.46-23H110.41
bone (os femoris), adult.CNhs10483.56-12G230.08
bone (os femoris), neonate N02.CNhs11227.1985-43F511.16
bone (os femoris), neonate N16.CNhs11225.1525-43A619.88
bone (os femoris), neonate N20.CNhs11195.1350-25C323.27
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H717.37
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.77
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.34
corpora quadrigemina, adult.CNhs10501.16-22A47.34
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.98
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.87
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G48.00
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D46.63
eyeball, neonate N00.CNhs11207.633-15C67.48
eyeball, neonate N01.CNhs11140.1532-43E77.30
eyeball, neonate N02.CNhs11205.1551-44G87.03
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E25.10
forelimb, embryo E14.CNhs10577.413-26A85.70
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B57.41
gonad, embryo E13.CNhs11044.1564-45I65.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.24
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D514.21
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I95.22
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C86.69
heart, embryo E16.CNhs11021.457-17C67.40
heart, embryo E17.CNhs11025.479-18E56.05
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E37.59
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G18.54
heart, neonate N16.CNhs11209.782-15G19.24
heart, neonate N20.CNhs11127.821-26I610.23
heart, neonate N25.CNhs11196.1351-25D37.68
heart, neonate N30.CNhs11202.1390-42D210.74
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G14.84
intestinal mucosa, adult.CNhs10506.860-29I323.13
intestine, adult.CNhs10496.178-9A39.26
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D84.77
intestine, embryo E16.CNhs10585.463-22H45.65
intestine, embryo E17.CNhs10582.482-18D38.45
intestine, embryo E18.CNhs10526.1289-20F715.03
intestine, neonate N00.CNhs11126.644-26D111.39
intestine, neonate N01.CNhs11192.1322-23E912.52
intestine, neonate N06.CNhs11102.688-20B818.35
intestine, neonate N07.CNhs11095.720-20F218.70
intestine, neonate N10.CNhs11098.755-23A517.16
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E318.16
intestine, neonate N30.CNhs11131.1384-42G115.53
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F84.46
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C77.56
kidney, neonate N00.CNhs11214.646-21G75.54
kidney, neonate N10.CNhs11206.758-6D511.70
kidney, neonate N20.CNhs11113.832-19I19.00
kidney, neonate N25.CNhs11122.1353-25F313.82
kidney, neonate N30.CNhs11203.1385-42H116.91
liver, adult pregnant day01.CNhs10466.508-5B215.71
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H65.11
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D78.72
liver, embryo E16.CNhs10523.462-17F517.12
liver, embryo E17.CNhs10510.481-18A316.81
liver, embryo E18.CNhs10579.499-43G416.69
liver, neonate N00.CNhs11117.641-24F415.73
liver, neonate N03.CNhs11123.1345-25G217.85
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H221.96
liver, neonate N10.CNhs11115.751-24B930.89
liver, neonate N20.CNhs11220.823-25A325.01
liver, neonate N25.CNhs11198.1368-26H113.10
liver, neonate N30.CNhs11106.1382-42D119.78
lung, adult.CNhs10474.28-22B138.98
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F86.03
lung, embryo E15.CNhs11020.432-17C54.75
lung, embryo E16.CNhs10998.458-17B67.28
lung, embryo E17.CNhs10605.480-44A610.72
lung, embryo E18.CNhs10583.1287-20I614.76
lung, neonate N00.CNhs11224.640-42C616.59
lung, neonate N06.CNhs11212.683-20E522.07
lung, neonate N07.CNhs11111.715-19A321.26
lung, neonate N10.CNhs11219.750-23E629.50
lung, neonate N20.CNhs11109.822-18A439.49
lung, neonate N25.CNhs11119.1359-25C742.31
lung, neonate N30.CNhs11133.1394-42H250.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A119.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A112.51
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H214.90
medulla oblongata, adult.CNhs10477.17-12C28.03
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.38
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I711.50
ovary, embryo E18.CNhs11040.505-44H710.51
ovary, neonate N00.CNhs11217.1299-22I48.47
oviduct, adult pregnant day01.CNhs10500.988-6G69.57
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E56.79
pancreas, embryo E17.CNhs10599.1558-45G37.97
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G96.72
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B612.33
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E67.38
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A57.07
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I723.70
placenta, adult pregnant day17.CNhs10464.577-18G338.13
prostate, adult.CNhs10470.859-1F88.38
skin, adult.CNhs10492.30-1C36.27
skin, neonate N00.CNhs11124.650-25G48.07
skin, neonate N03.CNhs11215.662-22H39.05
skin, neonate N06.CNhs11097.693-20I58.59
skin, neonate N10.CNhs11108.762-6C49.03
small intestine, neonate N16.CNhs11114.790-21I118.65
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G240.33
spleen, embryo E16.CNhs11035.461-43C111.35
spleen, embryo E18.CNhs11011.1271-21F214.26
spleen, neonate N10.CNhs11116.752-24D129.95
spleen, neonate N20.CNhs11112.824-19H144.70
spleen, neonate N25.CNhs11099.1354-25G352.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C916.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.41
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D46.80
stomach, embryo E17.CNhs11006.1035-18D55.23
stomach, embryo E18.CNhs10999.1286-20C67.21
stomach, neonate N03.CNhs11193.1340-24B89.04
stomach, neonate N07.CNhs11210.718-18A911.74
stomach, neonate N25.CNhs11104.1355-25E414.92
stomach, neonate N30.CNhs11134.1386-42I114.00
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C54.80
testis, embryo E16.CNhs11033.470-26G55.25
testis, embryo E17.CNhs11029.486-18I55.42
testis, embryo E18.CNhs11027.503-18G59.12
testis, neonate N00.CNhs11189.1300-22B76.45
testis, neonate N07.CNhs11222.726-26I47.81
testis, neonate N10.CNhs11204.763-44D96.61
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B519.91
thymus, embryo E14.CNhs11041.402-44I49.33
thymus, embryo E15.CNhs11005.430-45I211.40
thymus, embryo E16.CNhs11002.456-26C513.64
thymus, embryo E17.CNhs10581.478-18C113.79
thymus, embryo E18.CNhs10595.1273-19G411.92
thymus, neonate N02.CNhs11181.1541-43F815.26
thymus, neonate N03.CNhs11137.2104-43C717.72
thymus, neonate N06.CNhs11197.681-26C412.62
thymus, neonate N07.CNhs11211.713-19D315.39
thymus, neonate N10.CNhs11194.748-24E416.54
thymus, neonate N20.CNhs11186.820-7A217.25
thymus, neonate N25.CNhs11125.1362-25G715.59
thymus, neonate N30.CNhs11132.1393-42G222.32
tongue, adult.CNhs10499.32-1B46.35
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.56
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.72
urinary bladder, adult.CNhs10481.879-12E410.43
uterus, adult pregnant day19.CNhs10497.590-15F513.51
uterus, adult.CNhs10509.92-27E512.09
vagina, adult.CNhs10502.89-27D512.65
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H24.61
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.77
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.91
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.99
whole body, embryo E17.5.CNhs10513.490-9F97.91
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B310.53
whole body, neonate N00.CNhs10525.657-19C28.81
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D112.35
whole body, neonate N10.CNhs10518.761-6B410.90





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure3.39e-12118
endoderm3.39e-12118
presumptive endoderm3.39e-12118
digestive system2.41e-11116
digestive tract2.41e-11116
primitive gut2.41e-11116
subdivision of digestive tract1.80e-10114
organ component layer4.79e-1024
musculoskeletal system2.91e-0932
unilaminar epithelium7.50e-0966
hemolymphoid system4.73e-0848
immune system4.73e-0848
endo-epithelium2.16e-0769
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:10651929..10651951,%2B&oldid=4321272"