FFCP PHASE1:Hg19::chr11:46403305..46403316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4192 | |EntrezGene=4192 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6972 | |HGNC=6972 | ||
|TSSclassifier=strong | |||
|UniProt=P21741 | |UniProt=P21741 | ||
|association_with_transcript=2bp_to_ENST00000395565,ENST00000407067,NM_001012333,uc001ncq.2,uc001ncr.2,uc001ncs.2_5end | |association_with_transcript=2bp_to_ENST00000395565,ENST00000407067,NM_001012333,uc001ncq.2,uc001ncr.2,uc001ncs.2_5end | ||
|cluster_id=chr11:46403305..46403316,+ | |||
|description=CAGE_peak_7_at_MDK_5end | |description=CAGE_peak_7_at_MDK_5end | ||
|id=chr11:46403305..46403316,+ | |id=chr11:46403305..46403316,+ | ||
|ontology_enrichment_celltype=CL:0002321!2.88e-20!248;CL:0000220!2.77e-19!246;CL:0000066!7.28e-17!254;CL:0000222!3.96e-12!119;CL:0000393!1.14e-09!60;CL:0000211!1.14e-09!60;CL:0000183!2.68e-08!59;CL:0002319!1.17e-07!25;CL:0000187!3.38e-07!54;CL:0000213!5.71e-07!57;CL:0000215!5.71e-07!57;CL:0000133!7.82e-07!59 | |ontology_enrichment_celltype=CL:0002321!2.88e-20!248;CL:0000220!2.77e-19!246;CL:0000066!7.28e-17!254;CL:0000222!3.96e-12!119;CL:0000393!1.14e-09!60;CL:0000211!1.14e-09!60;CL:0000183!2.68e-08!59;CL:0002319!1.17e-07!25;CL:0000187!3.38e-07!54;CL:0000213!5.71e-07!57;CL:0000215!5.71e-07!57;CL:0000133!7.82e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;6.36e-14;25!CL:0000128;1.41e-09;7!CL:0000126;1.41e-09;7!CL:0000127;1.41e-09;7!CL:0002322;6.36e-08;5!CL:0000540;3.12e-07;6!CL:0000404;3.12e-07;6!CL:0000095;4.12e-07;17!CL:0002321;5.52e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.90e-15,250;CL:0000066,3.78e-14,253;CL:0002319,5.15e-14,25;CL:0000133,3.45e-12,59;CL:0000128,1.32e-09,7;CL:0000126,1.32e-09,7;CL:0000127,1.32e-09,7;CL:0002453,1.32e-09,7;CL:0000047,1.78e-09,8;CL:0000221,2.34e-08,72;CL:0002322,6.26e-08,5;CL:0000540,3.23e-07,6;CL:0000031,3.23e-07,6;CL:0000404,3.23e-07,6;CL:0000095,3.36e-07,17;CL:0000123,3.36e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000031;3.12e-07;6!CL:0000133;5.63e-07;59 | |||
|ontology_enrichment_disease=DOID:0050687!1.45e-10!143;DOID:305!1.90e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.74e-08;22!DOID:2994;9.74e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.15e-10,143;DOID:305,1.19e-08,106;DOID:3095,9.08e-08,22;DOID:2994,9.08e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000490!1.60e-14!138;UBERON:0000481!2.29e-11!347;UBERON:0000119!1.01e-10!312;UBERON:0000483!1.05e-10!309;UBERON:0005256!5.40e-09!143;UBERON:0003914!7.83e-09!118;UBERON:0000922!1.17e-08!612;UBERON:0000468!4.83e-08!659;UBERON:0003104!1.20e-07!238;UBERON:0009142!1.20e-07!238;UBERON:0002049!1.34e-07!79;UBERON:0007798!1.34e-07!79;UBERON:0007625!4.41e-07!11;UBERON:0002050!7.52e-07!605;UBERON:0005423!7.52e-07!605;UBERON:0000477!8.44e-07!286;UBERON:0004111!8.83e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.56e-09;11!UBERON:0001801;8.08e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.63e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,6.28021051175185,1.31064823278103,3.4289707169699,0.618831764800233,0,0.672325146451775,1.20538905604795,2.19093027116212,0.487932798790507,5.0479633811483,2.85600967741954,4.38836610069323,12.0219114595044,6.15934912827979,6.77930253811935,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,0.722878304769133,0.50133791063589,0.579386075843295,0,0,5.86115866417221,3.76939975686359,4.21606971327005,0.196468613246569,0,0,0,0,0,0,0,0,1.59009925893364,0.860234595106124,0,0.56530794192401,1.67799774483962,1.37559020970034,0.208994966536811,0.258416759169329,1.06729878806013,0,2.81980521976403,0.760272105718513,2.68468263302986,0.367663080345869,1.62028389576352,0.625098097988558,0.898117490504679,0.450445921933289,1.53316637465883,0,1.64881569537367,0,0,0.436094052142534,0,0.759783069987479,0,0,1.06400514659507,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0.937285727335186,0,0,0,0.23486899728753,0,0.280901613404497,0.408308342509787,0.368502951935304,0,1.18800285728205,1.23633464639278,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0.30648779579902,0.600952235626387,0.226864366320042,0.179389635688862,0.427114777637135,0.211931901159562,0,0.618315175430633,0,0.37223371266318,0,0.194874010322397,0,0.460249493211497,0.323292113637624,0,0.503760491138201,0.67824236924195,0,0.272746120590835,0.286804595389004,7.56236978003491,8.87949447753951,11.0384245726042,6.84162963101445,7.82194637714448,7.66452454059243,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,2.057870056657,2.94017422771084,0,0,0,0,1.22988438543114,1.3725424823882,0,0,0.100528972411631,0.185176890317059,1.3032332212413,0,1.44331342025273,13.2160661671588,1.05667824812239,1.44366447761074,1.38895653772983,1.33177906564219,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.571652865261156,0.672786506072164,0,0.2933531432838,0.517086863031111,0,0,1.06375246633948,2.08014873822732,1.28603687131071,0,0,0.285955987316295,2.71310802695722,1.64648067356154,0.325736184293735,0.355391948742546,0.791951872933429,0.602878754119172,4.35766729300147,0.099972991182057,0,0,0,0.479249710983165,0,1.42636905040718,0,0,0.537182889719687,0,0,0,0,3.30323011489202,7.8083912314573,3.09315525111078,1.00509759200609,1.91381625495949,0,0,0,1.2269149171914,3.00102312635806,0.271265023699736,0,0,0.157702415033935,0.117141414992713,0,4.5481500811197,0,1.99267679560631,0.921845842708516,0.868836144680828,0.391602314925481,1.02943027143257,0,0,0,0.303127571446259,3.32870879020994,3.62868351995616,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.232420756919918,3.98836183652353,0,0.368323955743585,0.574072240823034,1.27463817604702,1.18011973463482,2.25599806453706,0.231046011313244,7.84349769176855,0,0.73886140225013,0,0.170093705276516,0.863663664408557,1.54227252690289,3.52230368807009,2.50844886927427,0,0.831076008928724,2.23874754722178,0,0,3.33385162651306,1.64007322849853,0.976135183992909,0,0.183138929636687,0.330037999682352,0,0,1.6068392984416,1.25671933779759,0.154048617114644,0.15350367472613,0.689182862422653,0.751941714077915,0.870100163485371,0.596586391912706,2.58192903375538,0,0.384380134730212,0.127612712494584,0.30347334256665,1.39453664789186,0.31481234683064,0.6970372701606,1.54016790088044,0.532306030317022,1.73986598415015,0.37064843820784,0.286249773483982,0.372158369359667,0.316379424718726,0.571890581771475,2.04718233049067,0.855877976067841,0,0.78494864019923,0.539617372749944,0.823611089208164,0.471249609382746,0.808729926293264,0,0.421258456238981,2.92580243453754,1.46228093778771,0,0.682499557039929,0.565621727814851,0,0,1.32687795048244,1.75380354101505,0.578775534266688,3.27947376023316,0.202910376962704,1.239293992399,0.563391205064483,1.00387946542836,1.67023369722306,0,0,0.211107635297664,0.658589785919804,0.75894634753143,4.19921664293979,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,1.92283328029452,0,1.71528151186722,0,1.15415370381156,0.142283686696828,0,0,0,0,0.973865820823666,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,1.4098700508785,0.748562161632879,0,0,0,0,0,0.593929361665277,0,0,0.140669416410513,0.333926115068718,0,0.211125408127993,0,0,1.25966373927138,3.37486652257111,0,0,0.898683511473268,1.25314822272926,0,0,0,0,0,0.185536196323703,0,0,0,0,6.25863965570248,1.01701460117107,0.236387681767936,0,0,1.90987494426621,0,0.120596438625408,1.52581736317083,0,0.295547618953547,0,0,0.697118721393016,0.769502585037971,0,1.1528195219403,0,2.28159481036217,0,0.274792780205587,0,0,0,0,0.676786981851542,1.17637520590644,0.671286347903371,0.37950746544837,0,0,0.326465616318295,3.39247371441458,0,0,0.88457564503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| ||
|short_description=p7@MDK | |short_description=p7@MDK | ||
}} | }} |
Latest revision as of 02:58, 18 September 2015
Short description: | p7@MDK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MDK_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000395565, ENST00000407067, NM_001012333, uc001ncq.2, uc001ncr.2, uc001ncs.2_5end |
EntrezGene: | MDK |
HGNC: | 6972 |
UniProt: | P21741 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.90e-15 | 250 |
epithelial cell | 3.78e-14 | 253 |
neural cell | 5.15e-14 | 25 |
neurectodermal cell | 3.45e-12 | 59 |
oligodendrocyte | 1.32e-09 | 7 |
macroglial cell | 1.32e-09 | 7 |
astrocyte | 1.32e-09 | 7 |
oligodendrocyte precursor cell | 1.32e-09 | 7 |
neuronal stem cell | 1.78e-09 | 8 |
ectodermal cell | 2.34e-08 | 72 |
embryonic stem cell | 6.26e-08 | 5 |
neuron | 3.23e-07 | 6 |
neuroblast | 3.23e-07 | 6 |
electrically signaling cell | 3.23e-07 | 6 |
neuron associated cell | 3.36e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 3.36e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 2.63e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.15e-10 | 143 |
carcinoma | 1.19e-08 | 106 |
germ cell and embryonal cancer | 9.08e-08 | 22 |
germ cell cancer | 9.08e-08 | 22 |