FFCP PHASE1:Mm9::chr17:71096223..71096230,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=99 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:71096223..71096230,- | |||
|description=CAGE_peak_at_chr17:71096223..71096230,- | |description=CAGE_peak_at_chr17:71096223..71096230,- | ||
|id=chr17:71096223..71096230,- | |id=chr17:71096223..71096230,- | ||
|ontology_enrichment_celltype=CL:0000066!4.19e-20!25;CL:0000223!2.31e-19!20;CL:0002076!1.01e-18!15;CL:0002563!6.07e-17!9;CL:0002251!6.07e-17!9;CL:0000063!3.98e-12!66;CL:0000548!2.47e-10!115;CL:0000004!2.47e-10!115;CL:0000255!2.47e-10!115;CL:0000239!3.24e-10!6;CL:0000677!3.24e-10!6;CL:0000212!3.24e-10!6;CL:0000584!3.24e-10!6;CL:0002371!6.59e-10!118;CL:0000144!1.67e-09!121;CL:0000012!1.67e-09!121;CL:0000068!9.95e-09!3;CL:0002202!9.95e-09!3;CL:0000069!9.95e-09!3;CL:0002632!9.95e-09!3;CL:0002368!9.95e-09!3;CL:0000307!9.95e-09!3;CL:0000377!9.95e-09!3;CL:0000075!1.07e-08!7;CL:0002250!1.66e-08!3;CL:0000215!2.87e-07!3;CL:0002321!3.20e-07!70;CL:0000220!3.20e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,4.97e-39,20;CL:0002076,2.93e-31,15;CL:0000066,3.19e-31,25;CL:0000068,1.40e-29,3;CL:0002202,1.40e-29,3;CL:0000069,1.40e-29,3;CL:0002632,1.40e-29,3;CL:0002368,1.40e-29,3;CL:0000307,1.40e-29,3;CL:0000377,1.40e-29,3;CL:0002563,1.71e-17,9;CL:0002251,1.71e-17,9;CL:0002250,4.25e-14,3;CL:0000213,2.31e-11,1;CL:0002078,2.31e-11,1;CL:0000115,2.31e-11,1;CL:0002262,2.31e-11,1;CL:1000398,2.31e-11,1;CL:0002321,4.95e-11,70;CL:0000182,4.91e-09,5;CL:0000239,3.16e-07,6;CL:0000677,3.16e-07,6;CL:0000584,3.16e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!6.07e-17!9;UBERON:0004808!6.07e-17!9;UBERON:0001277!6.07e-17!9;UBERON:0000485!1.36e-13!11;UBERON:0000344!4.58e-12!15;UBERON:0001242!2.84e-11!13;UBERON:0000060!2.84e-11!13;UBERON:0001262!2.84e-11!13;UBERON:0004786!2.84e-11!13;UBERON:0003126!9.95e-09!3;UBERON:0001005!9.95e-09!3;UBERON:0007196!9.95e-09!3;UBERON:0001558!9.95e-09!3;UBERON:0004923!6.97e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.40e-29,3;UBERON:0001005,1.40e-29,3;UBERON:0007196,1.40e-29,3;UBERON:0001558,1.40e-29,3;UBERON:0003350,1.71e-17,9;UBERON:0004808,1.71e-17,9;UBERON:0001277,1.71e-17,9;UBERON:0000485,2.14e-14,11;UBERON:0001242,3.01e-12,13;UBERON:0001262,3.01e-12,13;UBERON:0004786,3.01e-12,13;UBERON:0002394,2.31e-11,1;UBERON:0001281,2.31e-11,1;UBERON:0000353,2.31e-11,1;UBERON:0003497,2.31e-11,1;UBERON:0003909,2.31e-11,1;UBERON:0003928,2.31e-11,1;UBERON:0003835,2.31e-11,1;UBERON:0003513,2.31e-11,1;UBERON:0001280,2.31e-11,1;UBERON:0004647,2.31e-11,1;UBERON:0002294,2.31e-11,1;UBERON:0001173,2.31e-11,1;UBERON:0004912,2.31e-11,1;UBERON:0005171,2.31e-11,1;UBERON:0000344,1.15e-10,15;UBERON:0004923,8.67e-07,24 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,1.00179145989269,0.839396359559449,1.16806320297763,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0,0.57423196411502,0.86152399231815,0,0,0,0,0,0,0,2.88851619751275,0.498703936075477,2.6542016314108,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,2.89864488701678,0.860423876981386,23.7989966797713,0,0,0,0,0,0,0,0,0,0,0,2.81438353314578,2.53359865475099,1.51657333504435,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0,0.30246421130683,1.00179145989269,0.839396359559449,1.16806320297763,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0,0.57423196411502,0.86152399231815,0,0,0,0,0,0,0,2.88851619751275,0.498703936075477,2.6542016314108,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,2.89864488701678,0.860423876981386,23.7989966797713,0,0,0,0,0,0,0,0,0,0,0,2.81438353314578,2.53359865475099,1.51657333504435,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:71096223..71096230,- | |short_description=p@chr17:71096223..71096230,- | ||
}} | }} |
Latest revision as of 06:46, 5 August 2015
Short description: | p@chr17:71096223..71096230, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:71096223..71096230, - |
Coexpression cluster: | MCL_coexpression_mm9:99 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.97e-39 | 20 |
endo-epithelial cell | 2.93e-31 | 15 |
epithelial cell | 3.19e-31 | 25 |
duct epithelial cell | 1.40e-29 | 3 |
epithelial cell of tracheobronchial tree | 1.40e-29 | 3 |
branched duct epithelial cell | 1.40e-29 | 3 |
epithelial cell of lower respiratory tract | 1.40e-29 | 3 |
respiratory epithelial cell | 1.40e-29 | 3 |
tracheal epithelial cell | 1.40e-29 | 3 |
tracheoblast | 1.40e-29 | 3 |
intestinal epithelial cell | 1.71e-17 | 9 |
epithelial cell of alimentary canal | 1.71e-17 | 9 |
intestinal crypt stem cell | 4.25e-14 | 3 |
lining cell | 2.31e-11 | 1 |
meso-epithelial cell | 2.31e-11 | 1 |
endothelial cell | 2.31e-11 | 1 |
endothelial cell of sinusoid | 2.31e-11 | 1 |
endothelial cell of hepatic sinusoid | 2.31e-11 | 1 |
embryonic cell | 4.95e-11 | 70 |
hepatocyte | 4.91e-09 | 5 |
brush border epithelial cell | 3.16e-07 | 6 |
gut absorptive cell | 3.16e-07 | 6 |
enterocyte | 3.16e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.40e-29 | 3 |
respiratory airway | 1.40e-29 | 3 |
tracheobronchial tree | 1.40e-29 | 3 |
lower respiratory tract | 1.40e-29 | 3 |
epithelium of mucosa | 1.71e-17 | 9 |
gastrointestinal system epithelium | 1.71e-17 | 9 |
intestinal epithelium | 1.71e-17 | 9 |
simple columnar epithelium | 2.14e-14 | 11 |
intestinal mucosa | 3.01e-12 | 13 |
wall of intestine | 3.01e-12 | 13 |
gastrointestinal system mucosa | 3.01e-12 | 13 |
bile duct | 2.31e-11 | 1 |
hepatic sinusoid | 2.31e-11 | 1 |
parenchyma | 2.31e-11 | 1 |
abdomen blood vessel | 2.31e-11 | 1 |
sinusoid | 2.31e-11 | 1 |
digestive system duct | 2.31e-11 | 1 |
abdominal segment blood vessel | 2.31e-11 | 1 |
trunk blood vessel | 2.31e-11 | 1 |
liver parenchyma | 2.31e-11 | 1 |
liver lobule | 2.31e-11 | 1 |
biliary system | 2.31e-11 | 1 |
biliary tree | 2.31e-11 | 1 |
biliary bud | 2.31e-11 | 1 |
hepatic duct | 2.31e-11 | 1 |
mucosa | 1.15e-10 | 15 |
organ component layer | 8.67e-07 | 24 |