FFCP PHASE1:Hg19::chr11:19891271..19891309,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:19891271..19891309,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr11:19891271..19891309,+ | |description=CAGE_peak_at_chr11:19891271..19891309,+ | ||
|id=chr11:19891271..19891309,+ | |id=chr11:19891271..19891309,+ | ||
|ontology_enrichment_celltype=CL:0000242!5.88e-19!2;CL:0000312!4.01e-08!5;CL:0000240!6.65e-07!6;CL:0000311!6.65e-07!6;CL:0000079!6.65e-07!6;CL:0000237!6.65e-07!6;CL:0000036!6.65e-07!6;CL:0000357!6.65e-07!6;CL:0000114!6.65e-07!6 | |ontology_enrichment_celltype=CL:0000242!5.88e-19!2;CL:0000312!4.01e-08!5;CL:0000240!6.65e-07!6;CL:0000311!6.65e-07!6;CL:0000079!6.65e-07!6;CL:0000237!6.65e-07!6;CL:0000036!6.65e-07!6;CL:0000357!6.65e-07!6;CL:0000114!6.65e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.21e-21;2!CL:0000242;4.21e-21;2!CL:0000312;2.86e-09;5!CL:0000240;6.13e-08;6!CL:0000311;6.13e-08;6!CL:0000079;6.13e-08;6!CL:0000237;6.13e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.66e-21,2;CL:0000312,2.97e-09,5;CL:0000240,6.34e-08,6;CL:0000311,6.34e-08,6;CL:0000079,6.34e-08,6;CL:0000237,6.34e-08,6;CL:0000036,6.34e-08,6;CL:0000357,6.34e-08,6;CL:0000114,6.34e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.51e-53;3!CL:0000357;6.13e-08;6!CL:0000114;6.13e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!5.58e-18!12;UBERON:0002028!5.58e-18!12;UBERON:0007277!5.58e-18!12;UBERON:0004732!1.37e-16!13;UBERON:0003076!2.29e-14!15;UBERON:0003057!2.29e-14!15;UBERON:0001896!3.00e-12!3;UBERON:0005290!3.00e-12!3;UBERON:0010096!3.00e-12!3;UBERON:0007029!2.59e-10!1;UBERON:0001736!3.71e-10!1;UBERON:0006298!3.71e-10!1;UBERON:0002298!4.51e-10!8;UBERON:0002146!5.79e-10!1;UBERON:0005623!5.79e-10!1;UBERON:0002680!2.04e-09!9;UBERON:0001895!2.04e-09!9;UBERON:0010092!2.04e-09!9;UBERON:0004121!7.97e-09!169;UBERON:0000924!1.45e-08!173;UBERON:0006601!1.45e-08!173;UBERON:0003408!2.53e-08!10;UBERON:0002037!5.75e-07!6;UBERON:0006215!5.75e-07!6;UBERON:0001044!9.15e-07!6;UBERON:0003293!9.15e-07!6;UBERON:0003294!9.15e-07!6;UBERON:0010047!9.15e-07!6;UBERON:0000167!9.15e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.54e-27;6!UBERON:0000007;6.30e-21;2!UBERON:0002680;1.29e-18;9!UBERON:0001895;1.29e-18;9!UBERON:0004733;3.04e-14;12!UBERON:0002028;3.04e-14;12!UBERON:0004732;3.12e-13;13!UBERON:0003296;3.60e-11;4!UBERON:0010133;3.60e-11;4!UBERON:0001894;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.38e-27,6;UBERON:0006215,2.38e-27,6;UBERON:0000007,6.96e-21,2;UBERON:0002680,1.24e-18,9;UBERON:0001895,1.24e-18,9;UBERON:0010092,1.24e-18,9;UBERON:0004733,2.94e-14,12;UBERON:0002028,2.94e-14,12;UBERON:0007277,2.94e-14,12;UBERON:0004732,3.03e-13,13;UBERON:0003076,1.27e-11,15;UBERON:0003057,1.27e-11,15;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0000073,2.17e-07,53;UBERON:0002616,2.17e-07,53;UBERON:0001049,4.88e-07,56;UBERON:0005068,4.88e-07,56;UBERON:0006241,4.88e-07,56;UBERON:0007135,4.88e-07,56;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
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|short_description=p@chr11:19891271..19891309,+ | |short_description=p@chr11:19891271..19891309,+ | ||
}} | }} |
Latest revision as of 20:51, 23 July 2015
Short description: | p@chr11:19891271..19891309, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:19891271..19891309, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.66e-21 | 2 |
keratinocyte | 2.97e-09 | 5 |
stratified squamous epithelial cell | 6.34e-08 | 6 |
keratin accumulating cell | 6.34e-08 | 6 |
stratified epithelial cell | 6.34e-08 | 6 |
keratinizing barrier epithelial cell | 6.34e-08 | 6 |
epithelial fate stem cell | 6.34e-08 | 6 |
stratified epithelial stem cell | 6.34e-08 | 6 |
surface ectodermal cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.38e-27 | 6 |
rhombic lip | 2.38e-27 | 6 |
pituitary gland | 6.96e-21 | 2 |
regional part of metencephalon | 1.24e-18 | 9 |
metencephalon | 1.24e-18 | 9 |
future metencephalon | 1.24e-18 | 9 |
segmental subdivision of hindbrain | 2.94e-14 | 12 |
hindbrain | 2.94e-14 | 12 |
presumptive hindbrain | 2.94e-14 | 12 |
segmental subdivision of nervous system | 3.03e-13 | 13 |
posterior neural tube | 1.27e-11 | 15 |
chordal neural plate | 1.27e-11 | 15 |
gland of diencephalon | 3.79e-11 | 4 |
neuroendocrine gland | 3.79e-11 | 4 |
regional part of nervous system | 2.17e-07 | 53 |
regional part of brain | 2.17e-07 | 53 |
neural tube | 4.88e-07 | 56 |
neural rod | 4.88e-07 | 56 |
future spinal cord | 4.88e-07 | 56 |
neural keel | 4.88e-07 | 56 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |