Personal tools

FFCP PHASE1:Mm9::chr17:37199615..37199652,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54393
|EntrezGene=54393
|HGNC=
|HGNC=
|MCL_coexpression_id=313
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-276bp_to_ENSMUST00000174181_5end
|association_with_transcript=-276bp_to_ENSMUST00000174181_5end
|cluster_id=chr17:37199615..37199652,+
|description=CAGE_peak_9_at_Gabbr1_5end
|description=CAGE_peak_9_at_Gabbr1_5end
|id=chr17:37199615..37199652,+
|id=chr17:37199615..37199652,+
|ontology_enrichment_celltype=CL:0000117!1.05e-16!23;CL:0000337!1.05e-16!23;CL:0000540!8.49e-12!33;CL:0000047!8.49e-12!33;CL:0000031!8.49e-12!33;CL:0000404!8.49e-12!33;CL:0000393!3.23e-11!39;CL:0000211!3.23e-11!39;CL:0002319!4.42e-09!43;CL:0000221!1.37e-08!44;CL:0000133!1.37e-08!44;CL:0000055!1.70e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.23e-33,23;CL:0000337,2.23e-33,23;CL:0000540,5.75e-22,33;CL:0000047,5.75e-22,33;CL:0000031,5.75e-22,33;CL:0000404,5.75e-22,33;CL:0000393,6.22e-18,39;CL:0000211,6.22e-18,39;CL:0002319,9.70e-18,43;CL:0000221,3.10e-17,44;CL:0000133,3.10e-17,44;CL:0002610,1.81e-09,3;CL:0002321,3.29e-09,70;CL:0002614,5.78e-09,3;CL:0002612,2.38e-08,3;CL:0002613,9.77e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.57e-22!73;UBERON:0005743!3.57e-22!73;UBERON:0000073!2.06e-21!75;UBERON:0001016!2.06e-21!75;UBERON:0002020!4.71e-21!34;UBERON:0001049!1.02e-20!52;UBERON:0005068!1.02e-20!52;UBERON:0006241!1.02e-20!52;UBERON:0007135!1.02e-20!52;UBERON:0000955!1.82e-19!50;UBERON:0006238!1.82e-19!50;UBERON:0002616!8.54e-19!49;UBERON:0000033!2.57e-18!63;UBERON:0002791!3.33e-17!29;UBERON:0003528!3.33e-17!29;UBERON:0001893!3.33e-17!29;UBERON:0002346!5.96e-17!71;UBERON:0003075!5.96e-17!71;UBERON:0007284!5.96e-17!71;UBERON:0003056!1.66e-16!49;UBERON:0003080!1.01e-15!40;UBERON:0002780!3.77e-15!39;UBERON:0001890!3.77e-15!39;UBERON:0006240!3.77e-15!39;UBERON:0004121!4.70e-15!102;UBERON:0000924!4.70e-15!102;UBERON:0006601!4.70e-15!102;UBERON:0000153!1.96e-12!94;UBERON:0007811!1.97e-12!86;UBERON:0000956!1.02e-11!21;UBERON:0001869!1.02e-11!21;UBERON:0000203!1.02e-11!21;UBERON:0002619!7.36e-10!17;UBERON:0002021!1.17e-08!10;UBERON:0000411!1.17e-08!10;UBERON:0001950!1.17e-08!10;UBERON:0000025!1.87e-08!114;UBERON:0004111!7.87e-07!122;UBERON:0002420!8.62e-07!8;UBERON:0007245!8.62e-07!8;UBERON:0010009!8.62e-07!8;UBERON:0010011!8.62e-07!8;UBERON:0000454!8.62e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.57e-39,34;UBERON:0000073,1.57e-37,54;UBERON:0001017,4.97e-37,73;UBERON:0001016,7.23e-36,75;UBERON:0001049,9.58e-33,52;UBERON:0005068,9.58e-33,52;UBERON:0006241,9.58e-33,52;UBERON:0007135,9.58e-33,52;UBERON:0003528,8.20e-28,29;UBERON:0002791,8.20e-28,29;UBERON:0001893,8.20e-28,29;UBERON:0004121,6.45e-27,95;UBERON:0000924,6.45e-27,95;UBERON:0006601,6.45e-27,95;UBERON:0002346,1.82e-25,64;UBERON:0003075,1.82e-25,64;UBERON:0007284,1.82e-25,64;UBERON:0002021,1.79e-24,10;UBERON:0000411,1.79e-24,10;UBERON:0001950,1.79e-24,10;UBERON:0002780,3.36e-24,39;UBERON:0001890,3.36e-24,39;UBERON:0006240,3.36e-24,39;UBERON:0000955,1.61e-23,47;UBERON:0006238,1.61e-23,47;UBERON:0003080,1.79e-23,40;UBERON:0002616,6.40e-22,46;UBERON:0010371,1.42e-21,73;UBERON:0002619,1.73e-19,17;UBERON:0003056,2.85e-18,49;UBERON:0000956,6.29e-18,21;UBERON:0001869,6.29e-18,21;UBERON:0000203,6.29e-18,21;UBERON:0010314,7.44e-16,92;UBERON:0002240,5.86e-15,6;UBERON:0005174,5.86e-15,6;UBERON:0001137,5.86e-15,6;UBERON:0001948,3.96e-13,5;UBERON:0002315,3.96e-13,5;UBERON:0000025,1.30e-11,114;UBERON:0002420,4.01e-11,8;UBERON:0007245,4.01e-11,8;UBERON:0010009,4.01e-11,8;UBERON:0010011,4.01e-11,8;UBERON:0000454,4.01e-11,8;UBERON:0004111,1.89e-10,122;UBERON:0011216,1.13e-09,194;UBERON:0003076,1.59e-09,12;UBERON:0003057,1.59e-09,12;UBERON:0004684,1.81e-09,3;UBERON:0002275,1.81e-09,3;UBERON:0002038,5.78e-09,3;UBERON:0009663,5.78e-09,3;UBERON:0009661,5.78e-09,3;UBERON:0000125,5.78e-09,3;UBERON:0002308,5.78e-09,3;UBERON:0002257,2.38e-08,3;UBERON:0002950,8.42e-07,4;UBERON:0001891,8.42e-07,4;UBERON:0009616,8.42e-07,4;UBERON:0010286,8.42e-07,4
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0.159544317990673,0.684802919724823,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.251793635951155,0.101376931219515,0.367093504323363,0,0,0.219686182734472,0,0.279972843250725,0,0.167782606057736,0,0,0.257259436035947,0,0,0.809265843438391,4.23192783417626,2.53532561402472,0,0,0,0,0,0,1.15265491596466,0.311068836925433,1.75507719831198,0.420649922702764,3.14216082844184,4.63823935998388,0.489963196859816,0.766763768145891,2.75765635983006,6.60695285996332,5.49055553766307,8.29475279583715,1.05509030184155,2.74462930807229,2.6045668527838,9.21303896704557,4.50210088025344,2.90316670775939,2.94628585473668,5.12538050876771,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0.484875253135222,0,2.34224637609238,0.628340120440365,0,0,0,0,0.898743836428936,0.915001205637253,0.879580464790051,0.869121600961382,1.02286182932132,2.70124457927428,1.29793010454206,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0.476255494059295,0.12811372028485,0.281105173679186,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.462801338662135,0.465067889500816,0,0,0.16455984991348,0,0,0,0,0,1.47202963994889,0.205809224758569,0,0,0.426576501070468,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0.809621403349789,0,0,1.92792789853084,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,0,1.11255181206306,0,0,0,0,0.27338845544205,0,0,0.139951452323658,0.138199973804424,0.954670618015114,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0,0,0,0,0.56369293868419,0,0.165458490457098,0.388902376688095,0.258319646955462,0.168956125490778,0.352071715937262,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0,0,0,0,0,3.3885110557024,3.68260189205742,5.15605962095457,2.92150409984269,1.37016503954128,5.2877572817279,2.02506750069542,3.15224842256954,2.26571204492102,3.62432218226274,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.187283014939765,0.192075457214608,0,0,0.231768651889711,0,0.824171801606613,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0.159544317990673,0.684802919724823,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.251793635951155,0.101376931219515,0.367093504323363,0,0,0.219686182734472,0,0.279972843250725,0,0.167782606057736,0,0,0.257259436035947,0,0,0.809265843438391,4.23192783417626,2.53532561402472,0,0,0,0,0,0,1.15265491596466,0.311068836925433,1.75507719831198,0.420649922702764,3.14216082844184,4.63823935998388,0.489963196859816,0.766763768145891,2.75765635983006,6.60695285996332,5.49055553766307,8.29475279583715,1.05509030184155,2.74462930807229,2.6045668527838,9.21303896704557,4.50210088025344,2.90316670775939,2.94628585473668,5.12538050876771,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0.484875253135222,0,2.34224637609238,0.628340120440365,0,0,0,0,0.898743836428936,0.915001205637253,0.879580464790051,0.869121600961382,1.02286182932132,2.70124457927428,1.29793010454206,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0.476255494059295,0.12811372028485,0.281105173679186,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.462801338662135,0.465067889500816,0,0,0.16455984991348,0,0,0,0,0,1.47202963994889,0.205809224758569,0,0,0.426576501070468,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0.809621403349789,0,0,1.92792789853084,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,0,1.11255181206306,0,0,0,0,0.27338845544205,0,0,0.139951452323658,0.138199973804424,0.954670618015114,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0,0,0,0,0.56369293868419,0,0.165458490457098,0.388902376688095,0.258319646955462,0.168956125490778,0.352071715937262,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0,0,0,0,0,3.3885110557024,3.68260189205742,5.15605962095457,2.92150409984269,1.37016503954128,5.2877572817279,2.02506750069542,3.15224842256954,2.26571204492102,3.62432218226274,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.187283014939765,0.192075457214608,0,0,0.231768651889711,0,0.824171801606613,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0.231867835620421
|short_description=p9@Gabbr1
|short_description=p9@Gabbr1
}}
}}

Latest revision as of 11:32, 26 September 2015

Short description:p9@Gabbr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Gabbr1_5end
Coexpression cluster:MCL_coexpression_mm9:313
Association with transcript: -276bp_to_ENSMUST00000174181_5end
EntrezGene:Gabbr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Gabbr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter9.57e-3934
regional part of nervous system1.57e-3754
central nervous system4.97e-3773
nervous system7.23e-3675
neural tube9.58e-3352
neural rod9.58e-3352
future spinal cord9.58e-3352
neural keel9.58e-3352
brain grey matter8.20e-2829
regional part of telencephalon8.20e-2829
telencephalon8.20e-2829
ectoderm-derived structure6.45e-2795
ectoderm6.45e-2795
presumptive ectoderm6.45e-2795
neurectoderm1.82e-2564
neural plate1.82e-2564
presumptive neural plate1.82e-2564
occipital lobe1.79e-2410
visual cortex1.79e-2410
neocortex1.79e-2410
regional part of forebrain3.36e-2439
forebrain3.36e-2439
future forebrain3.36e-2439
brain1.61e-2347
future brain1.61e-2347
anterior neural tube1.79e-2340
regional part of brain6.40e-2246
ecto-epithelium1.42e-2173
regional part of cerebral cortex1.73e-1917
pre-chordal neural plate2.85e-1849
cerebral cortex6.29e-1821
cerebral hemisphere6.29e-1821
pallium6.29e-1821
structure with developmental contribution from neural crest7.44e-1692
spinal cord5.86e-156
dorsal region element5.86e-156
dorsum5.86e-156
regional part of spinal cord3.96e-135
gray matter of spinal cord3.96e-135
tube1.30e-11114
basal ganglion4.01e-118
nuclear complex of neuraxis4.01e-118
aggregate regional part of brain4.01e-118
collection of basal ganglia4.01e-118
cerebral subcortex4.01e-118
anatomical conduit1.89e-10122
organ system subdivision1.13e-09194
posterior neural tube1.59e-0912
chordal neural plate1.59e-0912
raphe nuclei1.81e-093
reticular formation1.81e-093
substantia nigra5.78e-093
telencephalic nucleus5.78e-093
midbrain nucleus5.78e-093
neural nucleus5.78e-093
nucleus of brain5.78e-093
ventral horn of spinal cord2.38e-083
regional part of midbrain8.42e-074
midbrain8.42e-074
presumptive midbrain8.42e-074
midbrain neural tube8.42e-074
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:37199615..37199652,%2B&oldid=4251249"