FFCP PHASE1:Mm9::chr12:77811064..77811075,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20741 | |EntrezGene=20741 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q397 | |UniProt=E9Q397 | ||
|association_with_transcript=-54bp_to_ENSMUST00000166101_5end | |association_with_transcript=-54bp_to_ENSMUST00000166101_5end | ||
|cluster_id=chr12:77811064..77811075,- | |||
|description=CAGE_peak_5_at_Spnb1_5end | |description=CAGE_peak_5_at_Spnb1_5end | ||
|id=chr12:77811064..77811075,- | |id=chr12:77811064..77811075,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.94e-08,6;UBERON:0004457,6.94e-08,6;UBERON:0000042,6.94e-08,6;UBERON:0004854,6.94e-08,6;UBERON:0009034,6.94e-08,6;UBERON:0002095,6.94e-08,6;UBERON:0004782,6.94e-08,6;UBERON:0003281,6.94e-08,6;UBERON:0009664,6.94e-08,6;UBERON:0002296,6.94e-08,6;UBERON:0005602,6.94e-08,6;UBERON:0001179,6.94e-08,6;UBERON:0006293,6.94e-08,6;UBERON:0000970,7.40e-08,9;UBERON:0000019,7.40e-08,9;UBERON:0000047,7.40e-08,9;UBERON:0010312,7.40e-08,9;UBERON:0004088,7.40e-08,9;UBERON:0002104,7.40e-08,9;UBERON:0001456,7.40e-08,9;UBERON:0003072,7.40e-08,9;UBERON:0004128,7.40e-08,9;UBERON:0003071,7.40e-08,9 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0,0,26.648780945253,27.5366363650163,30.0811607595103,0,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,6.98533740805594,4.30545351309199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.662605622854841,0,0,0.919218786610021,0,0.383062014255563,0.921639199537461,0,0.0914876436024097,0,1.67509799400829,0,0.61119299110724,1.17851434189467,0.284743361598206,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,2.25530924795977,2.43572382649713,1.15307748628029,0.753613202763113,0.587943535678524,0,0,0,4.42305275974937,3.558870698843,13.2504911076236,7.75800405016355,0,1.46390398505774,0.41889341362691,0,0,0,0.127070227073065,0,0,0.251308704225729,0.347648640384553,0,0.20778804455956,0.324482526135515,0,5.349499736234,0,1.26265113531884,1.17108398666433,2.06911893990126,2.88099407688559,2.26057226753573,2.72145996605311,2.17793324484245,2.52994656311268,2.84573707812917,1.07783996466421,0.378212160335639,0,0,0,0.348252166522167,0,0,0,0,0,4.97101854085205,1.87620847984877,0.180062061461015,0,0.393528463494808,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,1.09775057645525,0.268412837520744,0,0,0,0,0.213288250535234,0.696710015581316,0.515469845288373,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,1.02823661348756,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,24.0256952231175,24.9629923793768,32.3801441834189,32.254759300772,35.4530424836053,25.7172110299234,21.28951417136,6.48540907100142,4.66754402419738,1.43768206527355,2.60498663367952,0.624075346229121,0,0,0,0,0.947457058852424,0,0,0,0.167506257441816,0.238043640886014,0,0.472905432318573,0.664394068946325,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,1.12385412991454,0.703270119553219,0,1.26235463602186,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,0,0,1.06839362200353,0,0,0,0.485561272309963,0,0,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0.36012218806262,0,0,0,0,0.164549020602121,0.608929898229199,0.23467170806371,0,0,0,0,0,0.238744688006273,0,0,1.11255181206306,20.3336348149445,1.857481811669,8.51894825900674,27.3134262656802,28.7057878214153,24.7080427063044,0,0,0,0,0.474503990371703,0.609958401380546,0.108005340821801,0.209088296014469,0,0,0.330613822901344,0,0,0.621339313086926,0,0.299033092087958,0.66183396182839,0.388902376688095,0.129159823477731,0.337912250981556,0.58678619322877,0.39061315453185,0.104859344425711,0,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.207574695168353,0.798049746802062,2.39027048055788,7.05009479498053,3.14419743941973,1.47074806760011,1.11123363900808,2.06035057238894,1.28367683836726,3.28506375292937,2.78827229879264,2.07488975524684,2.80924522409647,2.4969809437899,2.5845961030026,0.952587382566147,3.47652977834566,2.70072908649187,1.64834360321323,2.35518272215036,4.11443102862498,3.90446773550542,2.38436189947321,1.88950341622027,3.3879376949519,2.96151127620868,2.37806364734604,1.31534855718921,2.30866993537965,1.12228454331548,1.66089025373844,3.15214343601803,1.63692417267876,1.54936841185966,2.3148793317737,0.499621155875892,1.16965804222704,1.07435527024149,0.191288332068843,1.98532277207564,2.78241402744506 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0,0,26.648780945253,27.5366363650163,30.0811607595103,0,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,6.98533740805594,4.30545351309199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.662605622854841,0,0,0.919218786610021,0,0.383062014255563,0.921639199537461,0,0.0914876436024097,0,1.67509799400829,0,0.61119299110724,1.17851434189467,0.284743361598206,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,2.25530924795977,2.43572382649713,1.15307748628029,0.753613202763113,0.587943535678524,0,0,0,4.42305275974937,3.558870698843,13.2504911076236,7.75800405016355,0,1.46390398505774,0.41889341362691,0,0,0,0.127070227073065,0,0,0.251308704225729,0.347648640384553,0,0.20778804455956,0.324482526135515,0,5.349499736234,0,1.26265113531884,1.17108398666433,2.06911893990126,2.88099407688559,2.26057226753573,2.72145996605311,2.17793324484245,2.52994656311268,2.84573707812917,1.07783996466421,0.378212160335639,0,0,0,0.348252166522167,0,0,0,0,0,4.97101854085205,1.87620847984877,0.180062061461015,0,0.393528463494808,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,1.09775057645525,0.268412837520744,0,0,0,0,0.213288250535234,0.696710015581316,0.515469845288373,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,1.02823661348756,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,24.0256952231175,24.9629923793768,32.3801441834189,32.254759300772,35.4530424836053,25.7172110299234,21.28951417136,6.48540907100142,4.66754402419738,1.43768206527355,2.60498663367952,0.624075346229121,0,0,0,0,0.947457058852424,0,0,0,0.167506257441816,0.238043640886014,0,0.472905432318573,0.664394068946325,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,1.12385412991454,0.703270119553219,0,1.26235463602186,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,0,0,1.06839362200353,0,0,0,0.485561272309963,0,0,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0.36012218806262,0,0,0,0,0.164549020602121,0.608929898229199,0.23467170806371,0,0,0,0,0,0.238744688006273,0,0,1.11255181206306,20.3336348149445,1.857481811669,8.51894825900674,27.3134262656802,28.7057878214153,24.7080427063044,0,0,0,0,0.474503990371703,0.609958401380546,0.108005340821801,0.209088296014469,0,0,0.330613822901344,0,0,0.621339313086926,0,0.299033092087958,0.66183396182839,0.388902376688095,0.129159823477731,0.337912250981556,0.58678619322877,0.39061315453185,0.104859344425711,0,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.207574695168353,0.798049746802062,2.39027048055788,7.05009479498053,3.14419743941973,1.47074806760011,1.11123363900808,2.06035057238894,1.28367683836726,3.28506375292937,2.78827229879264,2.07488975524684,2.80924522409647,2.4969809437899,2.5845961030026,0.952587382566147,3.47652977834566,2.70072908649187,1.64834360321323,2.35518272215036,4.11443102862498,3.90446773550542,2.38436189947321,1.88950341622027,3.3879376949519,2.96151127620868,2.37806364734604,1.31534855718921,2.30866993537965,1.12228454331548,1.66089025373844,3.15214343601803,1.63692417267876,1.54936841185966,2.3148793317737,0.499621155875892,1.16965804222704,1.07435527024149,0.191288332068843,1.98532277207564,2.78241402744506 | ||
|short_description=p5@Spnb1 | |short_description=p5@Spnb1 | ||
}} | }} |
Latest revision as of 19:37, 26 September 2015
Short description: | p5@Spnb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Spnb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | -54bp_to_ENSMUST00000166101_5end |
EntrezGene: | Spnb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 6.94e-08 | 6 |
cavity lining | 6.94e-08 | 6 |
serous membrane | 6.94e-08 | 6 |
gastrointestinal system mesentery | 6.94e-08 | 6 |
stomach region | 6.94e-08 | 6 |
mesentery | 6.94e-08 | 6 |
gastrointestinal system serosa | 6.94e-08 | 6 |
mesentery of stomach | 6.94e-08 | 6 |
gut mesentery | 6.94e-08 | 6 |
dorsal mesentery | 6.94e-08 | 6 |
dorsal mesogastrium | 6.94e-08 | 6 |
peritoneal cavity | 6.94e-08 | 6 |
spleen primordium | 6.94e-08 | 6 |
eye | 7.40e-08 | 9 |
camera-type eye | 7.40e-08 | 9 |
simple eye | 7.40e-08 | 9 |
immature eye | 7.40e-08 | 9 |
ocular region | 7.40e-08 | 9 |
visual system | 7.40e-08 | 9 |
face | 7.40e-08 | 9 |
optic cup | 7.40e-08 | 9 |
optic vesicle | 7.40e-08 | 9 |
eye primordium | 7.40e-08 | 9 |