FFCP PHASE1:Hg19::chr11:112034803..112034824,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3606 | |EntrezGene=3606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5986 | |HGNC=5986 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000528832,ENST00000533858,ENST00000534225_5end | |association_with_transcript=0bp_to_ENST00000528832,ENST00000533858,ENST00000534225_5end | ||
|cluster_id=chr11:112034803..112034824,- | |||
|coexpression_cluster_id=C2095 | |||
|description=CAGE_peak_1_at_IL18_5end | |description=CAGE_peak_1_at_IL18_5end | ||
|id=chr11:112034803..112034824,- | |id=chr11:112034803..112034824,- | ||
|ontology_enrichment_celltype=CL:0000763!5.08e-23!112;CL:0000049!5.08e-23!112;CL:0000557!6.56e-23!71;CL:0000839!1.17e-21!70;CL:0000766!4.66e-21!76;CL:0002009!1.03e-20!65;CL:0002194!1.14e-19!63;CL:0000576!1.14e-19!63;CL:0000040!1.14e-19!63;CL:0000559!1.14e-19!63;CL:0000860!8.10e-15!45;CL:0000066!2.04e-14!254;CL:0002057!1.70e-13!42;CL:0002076!7.75e-13!43;CL:0000223!4.31e-09!59;CL:0000077!8.06e-08!19;CL:0000037!8.70e-07!172;CL:0000566!8.70e-07!172 | |ontology_enrichment_celltype=CL:0000763!5.08e-23!112;CL:0000049!5.08e-23!112;CL:0000557!6.56e-23!71;CL:0000839!1.17e-21!70;CL:0000766!4.66e-21!76;CL:0002009!1.03e-20!65;CL:0002194!1.14e-19!63;CL:0000576!1.14e-19!63;CL:0000040!1.14e-19!63;CL:0000559!1.14e-19!63;CL:0000860!8.10e-15!45;CL:0000066!2.04e-14!254;CL:0002057!1.70e-13!42;CL:0002076!7.75e-13!43;CL:0000223!4.31e-09!59;CL:0000077!8.06e-08!19;CL:0000037!8.70e-07!172;CL:0000566!8.70e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.12e-12;39!CL:0000234;1.12e-12;39!CL:0000860;9.46e-12;33!CL:0002057;9.46e-12;33!CL:0002076;6.39e-11;42!CL:0000576;1.59e-10;48!CL:0000766;6.50e-10;69!CL:0000077;4.51e-08;19!CL:0000763;2.88e-07;100!CL:0002251;7.63e-07;20!CL:0002368;8.53e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.79e-23,108;CL:0000049,4.79e-23,108;CL:0000557,5.82e-23,67;CL:0000839,1.17e-21,66;CL:0000766,4.05e-21,72;CL:0002009,1.06e-20,61;CL:0002194,1.29e-19,59;CL:0000576,1.29e-19,59;CL:0000040,1.29e-19,59;CL:0000559,1.29e-19,59;CL:0000473,3.68e-17,48;CL:0000234,3.68e-17,48;CL:0000066,1.23e-15,253;CL:0002076,2.60e-14,42;CL:0000860,6.51e-14,42;CL:0002057,6.51e-14,42;CL:0000223,3.45e-10,58;CL:0000077,4.86e-08,19;CL:0000037,6.86e-07,168;CL:0002251,7.27e-07,20;CL:0002368,8.42e-07,13 | |||
|ontology_enrichment_development_v019=CL:0002057;3.40e-10;42!CL:0000049;5.17e-07;108 | |||
|ontology_enrichment_disease=DOID:305!2.70e-11!106;DOID:1749!3.10e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.98e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.46e-12,106;DOID:1749,1.96e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.25e-18!80;UBERON:0000062!1.13e-17!511;UBERON:0002390!2.11e-15!102;UBERON:0003061!2.11e-15!102;UBERON:0001474!2.54e-14!86;UBERON:0002193!8.47e-13!112;UBERON:0004765!2.21e-11!101;UBERON:0001434!2.21e-11!101;UBERON:0004119!2.06e-10!169;UBERON:0000925!2.06e-10!169;UBERON:0006595!2.06e-10!169;UBERON:0002405!2.61e-10!115;UBERON:0001007!7.82e-09!155;UBERON:0001555!7.82e-09!155;UBERON:0007026!7.82e-09!155;UBERON:0004921!9.47e-09!129;UBERON:0004185!9.47e-09!129;UBERON:0000065!5.05e-08!53;UBERON:0001004!9.74e-08!72;UBERON:0008947!1.60e-07!38;UBERON:0003258!1.60e-07!38;UBERON:0001737!8.79e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.70e-07;9!UBERON:0001557;5.70e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.58e-18,76;UBERON:0002390,7.48e-16,98;UBERON:0003061,7.48e-16,98;UBERON:0004765,5.81e-15,90;UBERON:0001474,1.78e-14,82;UBERON:0002405,5.20e-14,93;UBERON:0002193,1.83e-13,108;UBERON:0001434,1.39e-10,100;UBERON:0004119,5.20e-10,160;UBERON:0000925,5.20e-10,160;UBERON:0006595,5.20e-10,160;UBERON:0004921,3.05e-09,118;UBERON:0001007,7.50e-09,145;UBERON:0001555,7.50e-09,145;UBERON:0007026,7.50e-09,145;UBERON:0000065,6.45e-08,54;UBERON:0008947,9.60e-08,38;UBERON:0003258,9.60e-08,38;UBERON:0001004,2.08e-07,74;UBERON:0001737,5.76e-07,9;UBERON:0001041,7.10e-07,87 | |||
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|phase1_expression=1.09007027562334,2.14100523890983,3.80576891059122,2.00146596706261,0.893922188854576,21.8084631025092,5.06599756336621,0,0,82.566602664507,37.6812630705111,1.09220686065086,0.527533956456907,3.58922423584135,10.2733186475654,8.0679017574213,0,0.730310090387373,0,0.61560529038394,0.204000691244253,0,2.86235987131057,6.56997240349844,2.25976751270645,0,0,0,27.9288636562722,23.41359328393,29.7246956766866,104.814019590598,120.4823675113,121.649069344873,0,0,81.9145225744224,45.9816189081458,44.9219562333117,26.6923370980498,179.132379391939,129.233572741573,252.681631849137,23.5545146822895,37.0318424815033,20.1344770785887,48.1128106394767,54.274161218881,105.60987247523,17.8369283239733,27.6653563051429,40.9114257707252,198.573512104292,123.287574564511,138.135016326229,26.7304122150499,40.663016358619,63.1472991290688,157.021036786273,154.687791050677,157.916270072363,14.5134572082155,26.3292028060554,19.1801137739712,172.964706222636,122.555208533286,166.293540481819,20.3511418857962,26.5956288394303,45.6096573880745,141.663483616208,180.824319269894,266.461330225225,24.9281237848091,26.5755374956304,21.5948404873627,33.6985893439485,39.9470534958407,47.4140480756386,15.3906881620274,16.9079175619227,15.5264530699939,0,2.18455444504853,1.77901850772711,2.56038133539904,0.400395987036012,0.574752439954483,1.98313461835459,1.90810750907073,1.1384259382189,3.52342313622563,1.14681968437569,118.954195721123,112.101712596307,54.5205055484409,0.196709770113833,0,0.822405995998037,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0.164437904603676,0,0.579606171470105,0,0.267540828089713,0,0,0,0,0,0,0,0.950452044448374,3.76437797694432,3.58362511232371,2.49861453104692,3.55165878066025,0.821127996921047,0,0.267440195783507,0,0,2.01210257911091,0.767175371061182,0.722878304769133,0,0.289693037921647,0,0,7.27918092163323,6.65188192387692,4.47957407034943,9.23402482258874,84.5165068838698,102.707290651287,27.5865284606481,30.8209635019703,41.3499257213671,18.6022686958167,18.8758320557442,17.08704506116,0.39752481473341,0,0.347140501607594,0,0,0,2.50793959844173,0,1.77883131343355,0,0,0,0.24406205754817,0,0,4.55428614248807,2.2452937262617,3.26573293401634,0,0,0.366403487860815,7.9068250461638,7.75560528296651,136.497438320613,0,0.25326102332916,0.794455084879313,0,7.09336764396714,2.24271040056923,0,0,1.55605517699883,0.67355336034844,0,10.4436625075003,3.45705554687999,0.468642863667593,0.312160076830321,3.99330275081114,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,0,0,0,3.64064544775211,5.03032699271367,0.336672227908132,0.375355559615893,0,0.438977620880838,0,0.150238058906597,2.1552114800404,6.09924761342131,0.85422955527427,2.7551147150743,2.40072876867522,4.43125875725287,2.57640540045629,5.95573940261087,0.843881661206331,0.584622030967192,0,0,3.23292113637624,2.84007674013291,3.12331504505685,10.5127567232502,218.771285780852,170.193579248681,224.854802784979,1.21973706129595,1.06023814657188,1.85910308591229,1.34759371519982,2.77552935963191,0.36497735907583,0,0,0,0,0,159.24095285363,128.79870321967,132.556066435915,165.220371153126,144.01831254508,150.666843135546,143.190849266095,161.294044333034,148.897149738253,0,0,32.5143468951806,0,0,1.96565443335525,5.31710916013264,0,102.203392429327,6.86271241194102,73.9716923654136,160.734507158396,136.719402479818,99.6251669905778,0,0,1.44331342025273,16.2302566965108,9.04046945615827,0,0,0,4.74122638775565,1.71697232418975,141.574778500253,159.356904559821,138.078349766229,93.733833986777,75.7599398176856,87.1916848040677,93.6782147471793,4.35950907770943,0.766765358330422,548.826847016081,130.047537037535,72.772168554811,86.3278520967599,83.8249757951163,0.507983154337352,1.14596527667483,0,0,0.205654985406647,37.2425391726458,0,3.25180144601546,3.05172048183296,2.6401782895542,0.129271715757778,0,0,0,1.04007436911366,3.60090323966999,1.41849132023278,2.39779961114489,6.0050757336422,1.62786481617433,0.823240336780769,0,3.55391948742546,0,133.236204660337,114.170883076639,217.141336847428,125.272494060426,136.613928869538,111.741987926007,1.91699884393266,0,0,2.75084482668401,7.19167128926342,3.58121926479791,0,9.06341496928865,2.15627574859517,4.87703537863044,0,0,0,1.84267891867784,0,5.24304916763028,0,4.97298616123243,2.33113834266366,4.50153468953709,3.7977103317963,0,0.178428988797162,0.157702415033935,0,1.20378439891088,6.82222512167955,0,0,0.184369168541703,7.29822361531896,9.59425671567429,1.71571711905428,18.1955862988141,16.8257076638521,17.8235021531752,0.303127571446259,0,0.604780586659361,0.496215615637554,0.767309866440312,1.12264037773229,3.71603532841533,2.04682899626681,0.482561763430822,22.2627099667486,0.462629081407967,0.177561725313127,0.246381468041427,0,0.116210378459959,36.2578348774867,97.6466510376997,38.1215294194611,8.72589806051011,0.728364672026868,13.3746903258613,35.1935698067781,27.4174600091717,17.2556949218908,43.8417673959782,71.7751076471555,0,0.340187410553031,6.47747748306418,0,30.07505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| ||
|short_description=p1@IL18 | |short_description=p1@IL18 | ||
}} | }} |
Latest revision as of 05:08, 25 September 2015
Short description: | p1@IL18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL18_5end |
Coexpression cluster: | C2095_Mast_Retinal_CD14_bile_lung_cervical_Gingival |
Association with transcript: | 0bp_to_ENST00000528832, ENST00000533858, ENST00000534225_5end |
EntrezGene: | IL18 |
HGNC: | 5986 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.79e-23 | 108 |
common myeloid progenitor | 4.79e-23 | 108 |
granulocyte monocyte progenitor cell | 5.82e-23 | 67 |
myeloid lineage restricted progenitor cell | 1.17e-21 | 66 |
myeloid leukocyte | 4.05e-21 | 72 |
macrophage dendritic cell progenitor | 1.06e-20 | 61 |
monopoietic cell | 1.29e-19 | 59 |
monocyte | 1.29e-19 | 59 |
monoblast | 1.29e-19 | 59 |
promonocyte | 1.29e-19 | 59 |
defensive cell | 3.68e-17 | 48 |
phagocyte | 3.68e-17 | 48 |
epithelial cell | 1.23e-15 | 253 |
endo-epithelial cell | 2.60e-14 | 42 |
classical monocyte | 6.51e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.51e-14 | 42 |
endodermal cell | 3.45e-10 | 58 |
mesothelial cell | 4.86e-08 | 19 |
hematopoietic stem cell | 6.86e-07 | 168 |
epithelial cell of alimentary canal | 7.27e-07 | 20 |
respiratory epithelial cell | 8.42e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.58e-18 | 76 |
hematopoietic system | 7.48e-16 | 98 |
blood island | 7.48e-16 | 98 |
skeletal element | 5.81e-15 | 90 |
bone element | 1.78e-14 | 82 |
immune system | 5.20e-14 | 93 |
hemolymphoid system | 1.83e-13 | 108 |
skeletal system | 1.39e-10 | 100 |
endoderm-derived structure | 5.20e-10 | 160 |
endoderm | 5.20e-10 | 160 |
presumptive endoderm | 5.20e-10 | 160 |
subdivision of digestive tract | 3.05e-09 | 118 |
digestive system | 7.50e-09 | 145 |
digestive tract | 7.50e-09 | 145 |
primitive gut | 7.50e-09 | 145 |
respiratory tract | 6.45e-08 | 54 |
respiratory primordium | 9.60e-08 | 38 |
endoderm of foregut | 9.60e-08 | 38 |
respiratory system | 2.08e-07 | 74 |
larynx | 5.76e-07 | 9 |
foregut | 7.10e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.46e-12 | 106 |
squamous cell carcinoma | 1.96e-07 | 14 |