FFCP PHASE1:Mm9::chr12:28025985..28025997,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:28025985..28025997,- | |||
|description=CAGE_peak_at_chr12:28025985..28025997,- | |description=CAGE_peak_at_chr12:28025985..28025997,- | ||
|id=chr12:28025985..28025997,- | |id=chr12:28025985..28025997,- | ||
|ontology_enrichment_celltype=CL:0000117!1.58e-20!23;CL:0000337!1.58e-20!23;CL:0000540!1.64e-17!33;CL:0000047!1.64e-17!33;CL:0000031!1.64e-17!33;CL:0000404!1.64e-17!33;CL:0000393!7.69e-14!39;CL:0000211!7.69e-14!39;CL:0000221!6.47e-13!44;CL:0000133!6.47e-13!44;CL:0002319!5.61e-12!43;CL:0002609!3.44e-11!6;CL:0000055!1.84e-09!50 | |ontology_enrichment_celltype=CL:0000117!1.58e-20!23;CL:0000337!1.58e-20!23;CL:0000540!1.64e-17!33;CL:0000047!1.64e-17!33;CL:0000031!1.64e-17!33;CL:0000404!1.64e-17!33;CL:0000393!7.69e-14!39;CL:0000211!7.69e-14!39;CL:0000221!6.47e-13!44;CL:0000133!6.47e-13!44;CL:0002319!5.61e-12!43;CL:0002609!3.44e-11!6;CL:0000055!1.84e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.73e-41,23;CL:0000337,1.73e-41,23;CL:0002609,1.79e-41,6;CL:0000540,1.22e-28,33;CL:0000047,1.22e-28,33;CL:0000031,1.22e-28,33;CL:0000404,1.22e-28,33;CL:0000393,4.41e-24,39;CL:0000211,4.41e-24,39;CL:0002319,9.53e-22,43;CL:0000221,3.14e-21,44;CL:0000133,3.14e-21,44;CL:0002608,3.34e-21,3;CL:0000120,7.30e-21,3;CL:0002613,2.15e-20,3;CL:0002321,6.19e-13,70;CL:0000723,1.14e-09,91;CL:0000048,1.14e-09,91;CL:0000034,5.40e-09,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.16e-11!49;UBERON:0002020!1.37e-10!34;UBERON:0001017!2.28e-10!73;UBERON:0005743!2.28e-10!73;UBERON:0000033!4.21e-10!63;UBERON:0000073!6.93e-10!75;UBERON:0001016!6.93e-10!75;UBERON:0002780!1.91e-09!39;UBERON:0001890!1.91e-09!39;UBERON:0006240!1.91e-09!39;UBERON:0002346!2.03e-09!71;UBERON:0003075!2.03e-09!71;UBERON:0007284!2.03e-09!71;UBERON:0004121!2.52e-09!102;UBERON:0000924!2.52e-09!102;UBERON:0006601!2.52e-09!102;UBERON:0003080!4.39e-09!40;UBERON:0001049!8.51e-09!52;UBERON:0005068!8.51e-09!52;UBERON:0006241!8.51e-09!52;UBERON:0007135!8.51e-09!52;UBERON:0002791!1.49e-08!29;UBERON:0003528!1.49e-08!29;UBERON:0001893!1.49e-08!29;UBERON:0002616!2.52e-07!49;UBERON:0000955!4.43e-07!50;UBERON:0006238!4.43e-07!50;UBERON:0002420!6.27e-07!8;UBERON:0007245!6.27e-07!8;UBERON:0010009!6.27e-07!8;UBERON:0010011!6.27e-07!8;UBERON:0000454!6.27e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.61e-18,29;UBERON:0002791,2.61e-18,29;UBERON:0001893,2.61e-18,29;UBERON:0002020,1.68e-15,34;UBERON:0002780,2.08e-13,39;UBERON:0001890,2.08e-13,39;UBERON:0006240,2.08e-13,39;UBERON:0003080,4.74e-13,40;UBERON:0000369,1.68e-12,5;UBERON:0002435,1.68e-12,5;UBERON:0000204,1.68e-12,5;UBERON:0010082,1.68e-12,5;UBERON:0001017,2.35e-12,73;UBERON:0001016,5.40e-12,75;UBERON:0000956,1.02e-11,21;UBERON:0001869,1.02e-11,21;UBERON:0000203,1.02e-11,21;UBERON:0002616,3.09e-11,46;UBERON:0000955,5.60e-11,47;UBERON:0006238,5.60e-11,47;UBERON:0003056,1.71e-10,49;UBERON:0001049,7.76e-10,52;UBERON:0005068,7.76e-10,52;UBERON:0006241,7.76e-10,52;UBERON:0007135,7.76e-10,52;UBERON:0000073,1.94e-09,54;UBERON:0001954,1.95e-09,7;UBERON:0003022,1.95e-09,7;UBERON:0002421,1.95e-09,7;UBERON:0000349,1.95e-09,7;UBERON:0002600,1.95e-09,7;UBERON:0004121,3.29e-09,95;UBERON:0000924,3.29e-09,95;UBERON:0006601,3.29e-09,95;UBERON:0002420,5.00e-08,8;UBERON:0007245,5.00e-08,8;UBERON:0010009,5.00e-08,8;UBERON:0010011,5.00e-08,8;UBERON:0000454,5.00e-08,8;UBERON:0002346,8.10e-08,64;UBERON:0003075,8.10e-08,64;UBERON:0007284,8.10e-08,64;UBERON:0010371,9.82e-07,73 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,4.23192783417626,1.26766280701236,0,0,0,0,0,0,0,5.39185984004084,5.53524347159932,3.99617426567626,0,0,2.20483438586917,4.2172007248024,3.67687514644008,0,0.127687338085188,0,1.31886287730194,1.09785172322892,3.12548022334056,0,0.56276261003168,0.15279824777681,0.294628585473668,0.427115042397309,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,1.14166082342594,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,4.23192783417626,1.26766280701236,0,0,0,0,0,0,0,5.39185984004084,5.53524347159932,3.99617426567626,0,0,2.20483438586917,4.2172007248024,3.67687514644008,0,0.127687338085188,0,1.31886287730194,1.09785172322892,3.12548022334056,0,0.56276261003168,0.15279824777681,0.294628585473668,0.427115042397309,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,1.14166082342594,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr12:28025985..28025997,- | |short_description=p@chr12:28025985..28025997,- | ||
}} | }} |
Latest revision as of 22:54, 4 August 2015
Short description: | p@chr12:28025985..28025997, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28025985..28025997, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.73e-41 | 23 |
neuroblast (sensu Vertebrata) | 1.73e-41 | 23 |
neuron of cerebral cortex | 1.79e-41 | 6 |
neuron | 1.22e-28 | 33 |
neuronal stem cell | 1.22e-28 | 33 |
neuroblast | 1.22e-28 | 33 |
electrically signaling cell | 1.22e-28 | 33 |
electrically responsive cell | 4.41e-24 | 39 |
electrically active cell | 4.41e-24 | 39 |
neural cell | 9.53e-22 | 43 |
ectodermal cell | 3.14e-21 | 44 |
neurectodermal cell | 3.14e-21 | 44 |
hippocampal neuron | 3.34e-21 | 3 |
granule cell | 7.30e-21 | 3 |
striatum neuron | 2.15e-20 | 3 |
embryonic cell | 6.19e-13 | 70 |
somatic stem cell | 1.14e-09 | 91 |
multi fate stem cell | 1.14e-09 | 91 |
stem cell | 5.40e-09 | 97 |