FFCP PHASE1:Mm9::chr12:109544394..109544413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=214305 | |EntrezGene=214305 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q14DK5 | |UniProt=Q14DK5 | ||
|association_with_transcript=-66bp_to_ENSMUST00000021685,NM_001044380,uc007ozn.1_5end | |association_with_transcript=-66bp_to_ENSMUST00000021685,NM_001044380,uc007ozn.1_5end | ||
|cluster_id=chr12:109544394..109544413,+ | |||
|description=CAGE_peak_1_at_Hhipl1_5end | |description=CAGE_peak_1_at_Hhipl1_5end | ||
|id=chr12:109544394..109544413,+ | |id=chr12:109544394..109544413,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.20e-11!23;CL:0000337!1.20e-11!23;CL:0002319!1.39e-07!43;CL:0000055!3.13e-07!50;CL:0000221!3.98e-07!44;CL:0000133!3.98e-07!44 | |ontology_enrichment_celltype=CL:0000117!1.20e-11!23;CL:0000337!1.20e-11!23;CL:0002319!1.39e-07!43;CL:0000055!3.13e-07!50;CL:0000221!3.98e-07!44;CL:0000133!3.98e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.66e-19,23;CL:0000337,2.66e-19,23;CL:0000540,1.33e-12,33;CL:0000047,1.33e-12,33;CL:0000031,1.33e-12,33;CL:0000404,1.33e-12,33;CL:0002319,3.33e-12,43;CL:0000393,5.07e-12,39;CL:0000211,5.07e-12,39;CL:0000221,7.48e-12,44;CL:0000133,7.48e-12,44;CL:0002612,9.95e-10,3;CL:0002610,3.24e-09,3;CL:0002611,2.39e-07,2;CL:0002321,2.56e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.24e-14!75;UBERON:0001016!1.24e-14!75;UBERON:0001017!1.73e-14!73;UBERON:0005743!1.73e-14!73;UBERON:0001049!5.57e-14!52;UBERON:0005068!5.57e-14!52;UBERON:0006241!5.57e-14!52;UBERON:0007135!5.57e-14!52;UBERON:0000033!1.13e-12!63;UBERON:0000955!1.13e-12!50;UBERON:0006238!1.13e-12!50;UBERON:0004121!3.10e-12!102;UBERON:0000924!3.10e-12!102;UBERON:0006601!3.10e-12!102;UBERON:0002346!3.36e-12!71;UBERON:0003075!3.36e-12!71;UBERON:0007284!3.36e-12!71;UBERON:0002020!4.46e-12!34;UBERON:0002616!4.96e-12!49;UBERON:0003056!6.84e-12!49;UBERON:0003080!1.50e-10!40;UBERON:0002780!6.25e-10!39;UBERON:0001890!6.25e-10!39;UBERON:0006240!6.25e-10!39;UBERON:0002791!9.28e-09!29;UBERON:0003528!9.28e-09!29;UBERON:0001893!9.28e-09!29;UBERON:0000025!8.44e-08!114;UBERON:0004111!4.53e-07!122;UBERON:0000153!6.71e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.88e-18,73;UBERON:0001016,2.02e-17,75;UBERON:0001948,1.93e-15,5;UBERON:0002315,1.93e-15,5;UBERON:0000073,2.73e-15,54;UBERON:0002240,8.25e-13,6;UBERON:0005174,8.25e-13,6;UBERON:0001137,8.25e-13,6;UBERON:0004121,1.12e-12,95;UBERON:0000924,1.12e-12,95;UBERON:0006601,1.12e-12,95;UBERON:0002020,5.99e-12,34;UBERON:0001049,7.61e-11,52;UBERON:0005068,7.61e-11,52;UBERON:0006241,7.61e-11,52;UBERON:0007135,7.61e-11,52;UBERON:0002257,9.95e-10,3;UBERON:0004684,3.24e-09,3;UBERON:0002275,3.24e-09,3;UBERON:0002346,3.58e-08,64;UBERON:0003075,3.58e-08,64;UBERON:0007284,3.58e-08,64;UBERON:0002256,2.39e-07,2;UBERON:0002950,2.80e-07,4;UBERON:0001891,2.80e-07,4;UBERON:0009616,2.80e-07,4;UBERON:0010286,2.80e-07,4;UBERON:0010371,9.38e-07,73 | |||
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| ||
|short_description=p1@Hhipl1 | |short_description=p1@Hhipl1 | ||
}} | }} |
Latest revision as of 06:52, 26 September 2015
Short description: | p1@Hhipl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hhipl1_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_ENSMUST00000021685, NM_001044380, uc007ozn.1_5end |
EntrezGene: | Hhipl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.66e-19 | 23 |
neuroblast (sensu Vertebrata) | 2.66e-19 | 23 |
neuron | 1.33e-12 | 33 |
neuronal stem cell | 1.33e-12 | 33 |
neuroblast | 1.33e-12 | 33 |
electrically signaling cell | 1.33e-12 | 33 |
neural cell | 3.33e-12 | 43 |
electrically responsive cell | 5.07e-12 | 39 |
electrically active cell | 5.07e-12 | 39 |
ectodermal cell | 7.48e-12 | 44 |
neurectodermal cell | 7.48e-12 | 44 |
neuron of the ventral spinal cord | 9.95e-10 | 3 |
raphe nuclei neuron | 3.24e-09 | 3 |
neuron of the dorsal spinal cord | 2.39e-07 | 2 |
embryonic cell | 2.56e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.88e-18 | 73 |
nervous system | 2.02e-17 | 75 |
regional part of spinal cord | 1.93e-15 | 5 |
gray matter of spinal cord | 1.93e-15 | 5 |
regional part of nervous system | 2.73e-15 | 54 |
spinal cord | 8.25e-13 | 6 |
dorsal region element | 8.25e-13 | 6 |
dorsum | 8.25e-13 | 6 |
ectoderm-derived structure | 1.12e-12 | 95 |
ectoderm | 1.12e-12 | 95 |
presumptive ectoderm | 1.12e-12 | 95 |
gray matter | 5.99e-12 | 34 |
neural tube | 7.61e-11 | 52 |
neural rod | 7.61e-11 | 52 |
future spinal cord | 7.61e-11 | 52 |
neural keel | 7.61e-11 | 52 |
ventral horn of spinal cord | 9.95e-10 | 3 |
raphe nuclei | 3.24e-09 | 3 |
reticular formation | 3.24e-09 | 3 |
neurectoderm | 3.58e-08 | 64 |
neural plate | 3.58e-08 | 64 |
presumptive neural plate | 3.58e-08 | 64 |
dorsal horn of spinal cord | 2.39e-07 | 2 |
regional part of midbrain | 2.80e-07 | 4 |
midbrain | 2.80e-07 | 4 |
presumptive midbrain | 2.80e-07 | 4 |
midbrain neural tube | 2.80e-07 | 4 |
ecto-epithelium | 9.38e-07 | 73 |