FFCP PHASE1:Hg19::chr10:99446965..99447007,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60370 | |EntrezGene=60370 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30898 | |HGNC=30898 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T686 | |UniProt=Q5T686 | ||
|association_with_transcript=7bp_to_NM_021732,uc001koi.2_5end | |association_with_transcript=7bp_to_NM_021732,uc001koi.2_5end | ||
|cluster_id=chr10:99446965..99447007,- | |||
|description=CAGE_peak_1_at_AVPI1_5end | |description=CAGE_peak_1_at_AVPI1_5end | ||
|id=chr10:99446965..99447007,- | |id=chr10:99446965..99447007,- | ||
|ontology_enrichment_celltype=CL:0000066!4.15e-09!254;CL:0002076!8.29e-07!43 | |ontology_enrichment_celltype=CL:0000066!4.15e-09!254;CL:0002076!8.29e-07!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.24e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.92e-17!169;UBERON:0000925!6.92e-17!169;UBERON:0006595!6.92e-17!169;UBERON:0000062!4.98e-15!511;UBERON:0001007!1.03e-12!155;UBERON:0001555!1.03e-12!155;UBERON:0007026!1.03e-12!155;UBERON:0000077!6.19e-11!130;UBERON:0004921!4.17e-10!129;UBERON:0004185!4.17e-10!129;UBERON:0000468!3.17e-09!659;UBERON:0001004!4.43e-09!72;UBERON:0003102!6.68e-09!95;UBERON:0000161!3.79e-08!35;UBERON:0000926!4.31e-08!448;UBERON:0004120!4.31e-08!448;UBERON:0006603!4.31e-08!448;UBERON:0001737!1.49e-07!9;UBERON:0000923!2.00e-07!604;UBERON:0005291!2.00e-07!604;UBERON:0006598!2.00e-07!604;UBERON:0002532!2.00e-07!604;UBERON:0002050!2.11e-07!605;UBERON:0005423!2.11e-07!605;UBERON:0000467!2.83e-07!625;UBERON:0000922!3.66e-07!612;UBERON:0000480!4.14e-07!626;UBERON:0001041!5.12e-07!98;UBERON:0003104!8.56e-07!238;UBERON:0009142!8.56e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.41e-07;9!UBERON:0001557;1.41e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.83e-17,160;UBERON:0000925,5.83e-17,160;UBERON:0006595,5.83e-17,160;UBERON:0001007,1.98e-12,145;UBERON:0001555,1.98e-12,145;UBERON:0007026,1.98e-12,145;UBERON:0001004,9.20e-10,74;UBERON:0004921,1.65e-09,118;UBERON:0003102,4.65e-09,99;UBERON:0000161,1.31e-08,36;UBERON:0001737,1.45e-07,9;UBERON:0004923,5.55e-07,66 | |||
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| ||
|short_description=p1@AVPI1 | |short_description=p1@AVPI1 | ||
}} | }} |
Latest revision as of 06:58, 20 September 2015
Short description: | p1@AVPI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AVPI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_NM_021732, uc001koi.2_5end |
EntrezGene: | AVPI1 |
HGNC: | 30898 |
UniProt: | Q5T686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.24e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.83e-17 | 160 |
endoderm | 5.83e-17 | 160 |
presumptive endoderm | 5.83e-17 | 160 |
digestive system | 1.98e-12 | 145 |
digestive tract | 1.98e-12 | 145 |
primitive gut | 1.98e-12 | 145 |
respiratory system | 9.20e-10 | 74 |
subdivision of digestive tract | 1.65e-09 | 118 |
surface structure | 4.65e-09 | 99 |
orifice | 1.31e-08 | 36 |
larynx | 1.45e-07 | 9 |
organ component layer | 5.55e-07 | 66 |