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FFCP PHASE1:Mm9::chr11:86400456..86400481,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=75909
|EntrezGene=75909
|HGNC=
|HGNC=
|MCL_coexpression_id=2732
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=14bp_to_ENSMUST00000145846_5end
|association_with_transcript=14bp_to_ENSMUST00000145846_5end
|cluster_id=chr11:86400456..86400481,-
|description=CAGE_peak_5_at_Vmp1_5end
|description=CAGE_peak_5_at_Vmp1_5end
|id=chr11:86400456..86400481,-
|id=chr11:86400456..86400481,-
|ontology_enrichment_celltype=CL:0000063!2.08e-14!66;CL:0000066!2.02e-11!25;CL:0000223!6.65e-11!20;CL:0000219!1.85e-10!54;CL:0000144!2.22e-09!121;CL:0000012!2.22e-09!121;CL:0002371!2.41e-08!118;CL:0000548!5.90e-08!115;CL:0000004!5.90e-08!115;CL:0000255!5.90e-08!115;CL:0002076!7.16e-08!15;CL:0002320!2.53e-07!46;CL:0000134!2.53e-07!46
|ontology_enrichment_celltype=CL:0000063!2.08e-14!66;CL:0000066!2.02e-11!25;CL:0000223!6.65e-11!20;CL:0000219!1.85e-10!54;CL:0000144!2.22e-09!121;CL:0000012!2.22e-09!121;CL:0002371!2.41e-08!118;CL:0000548!5.90e-08!115;CL:0000004!5.90e-08!115;CL:0000255!5.90e-08!115;CL:0002076!7.16e-08!15;CL:0002320!2.53e-07!46;CL:0000134!2.53e-07!46
|ontology_enrichment_celltype_v019_2=CL:0000066,6.08e-13,25;CL:0000223,2.63e-12,20;CL:0000219,2.93e-12,54;CL:0002076,8.03e-09,15;CL:0002320,1.35e-08,46;CL:0000134,1.35e-08,46;CL:0002321,3.02e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!8.17e-10!130;UBERON:0000925!8.17e-10!130;UBERON:0006595!8.17e-10!130;UBERON:0001007!2.70e-09!128;UBERON:0001555!2.70e-09!128;UBERON:0007026!2.70e-09!128;UBERON:0000490!2.75e-09!66;UBERON:0004923!5.00e-09!24;UBERON:0002405!1.07e-08!70;UBERON:0004921!1.60e-08!126;UBERON:0004185!1.60e-08!126;UBERON:0000344!9.84e-08!15;UBERON:0002384!2.53e-07!46;UBERON:0005256!4.43e-07!47;UBERON:0002204!6.36e-07!32
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.91e-11,118;UBERON:0000925,5.91e-11,118;UBERON:0006595,5.91e-11,118;UBERON:0001007,2.33e-10,116;UBERON:0001555,2.33e-10,116;UBERON:0007026,2.33e-10,116;UBERON:0004923,3.77e-10,24;UBERON:0004921,1.81e-09,114;UBERON:0000490,5.61e-09,66;UBERON:0000344,1.16e-08,15;UBERON:0002384,1.35e-08,46;UBERON:0001242,1.99e-07,13;UBERON:0001262,1.99e-07,13;UBERON:0004786,1.99e-07,13;UBERON:0002204,3.17e-07,32;UBERON:0005256,4.24e-07,45
|phase1_expression=0.320297694209588,8.02643437570531,13.1949779422965,7.25914107136392,7.01254021924886,7.89032577985882,6.77476657727024,2.32421982194837,6.335492496825,4.68129052643987,8.90333434772626,4.22792442675283,0.513602189793617,0.34968160967599,1.33243904726265,2.22722794128809,2.09868563438444,3.78554598429885,3.15363197293199,3.39511721438424,3.14660173558958,1.98581902401771,3.6567970479451,11.5194544411253,19.4997888907094,10.3361753540704,9.04600191934057,10.7735616342945,6.27077284206034,3.02436155711917,9.5344119581781,1.90509202037889,0.61506478758457,0,13.5760261283099,3.49092755252834,13.8835162258411,1.67412652294763,4.6880120671428,1.57057123192139,10.5881667845583,6.83045484958446,6.79714494243615,38.9021167544534,60.0151432819526,30.8358543631625,11.7358701652206,2.8343270329458,14.2796018777407,11.665793944457,5.17949760013841,8.62515386189829,1.17447824240415,0,0.336093799142464,12.6057123657614,13.1805382371828,7.21940929188419,0,0,0,15.5868484751801,8.00365316500025,39.1456377017409,41.5323872278129,26.2877642530057,17.6764065205859,10.373894243682,0.103689612308478,0,0,0,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.883885756421003,0.711858403995515,0,12.343369513309,14.434167980396,9.56552812715537,1.72084775396277,178.832460765138,21.0484244738749,20.7928453583254,65.411925516211,2.24711072210803,8.862376774059,6.75443611967459,6.71345191569646,2.39433813620357,8.98285341900225,2.54805239706646,7.11066703153331,25.9789249213457,26.6027858748854,24.7706978057244,10.6191008138726,27.7063535502474,1.7813056687779,0.867426633830679,2.13125834818499,2.30615497256059,1.65794904607885,0.587943535678524,1.25666591329675,2.47194967734374,1.44599356919912,4.42305275974937,0.485300549842228,2.42925670306433,0.969750506270444,5.59175283654366,0,0,7.15279754584056,7.6681679683789,1.79970819298022,2.92261522268049,0,0.915001205637253,0.125654352112864,0,0,0,0,0.611036183101898,5.22509276562391,3.79084137650512,0.210441855886474,0.260240885925407,0.229902104433473,0,0.150704817835715,0.680364991513279,0.768682321709099,0.374806898238915,0.258703370739016,0.215567992932842,0,0,0.43839146485515,1.11218899690239,1.39300866608867,0.411564272815887,0,0,0.772043721344145,1.13665399758237,0.414251545071004,1.17263029990548,0.540186184383045,0.710234206755631,0.393528463494808,1.23413690309903,0.930135779001631,0.268273401399619,1.40118410840603,0.493679549740441,1.64167464079095,0.729619285912702,0.730999937126662,1.75640092232841,0.939444931322602,0.420579897128254,0.102904612379284,23.7901523748335,5.02456076660734,0,0.232236671860439,0.515469845288373,0.201683524623343,0.22237804384487,0.380451252225118,1.89811624617805,0.494096864172033,1.00534083520108,1.79060824837036,1.75467678407208,3.59527763461689,2.37751854862164,3.58454291857861,0.569003702859245,0.456994050438915,0,0.814605311381257,0.193952487167626,0.420814919341911,0.758838445491087,0.590440591918409,0.31399745568275,0.987177311374404,3.26097889795864,0.333690211432188,0.982794975566015,0,0.608580364165509,1.4470629585145,1.01850340712568,0.575392274901621,2.59416362840057,2.47105271869273,2.87536413054709,1.86070473834252,1.87222603868736,2.52578877947112,2.69096120282868,6.27176577772377,3.14080423283228,0.37898282354097,0.325929952884052,0.339490171550376,0,0.502518772325447,0.952174563544055,2.34160377429359,1.7339865851681,1.55025282754142,1.75400245523236,3.11340297959902,4.83517949224508,2.60368305446721,27.142431109069,21.2123216689297,0.491764273019036,1.65562047782839,0,0,0.163934945376675,1.26235463602186,1.26203287766503,0.390438744296638,0.861693590931196,3.82350076724083,4.67877215573028,5.09537755419898,2.02405350837447,2.92255857911312,2.37172666767914,0,3.54850213020672,0.35613120733451,0.81443479676788,4.45419332025846,1.32745138339963,0,0.604647113929502,0.377210159511796,0.590603785761546,1.22974059177571,1.80899805217755,2.18120237686503,0.356497378384721,0.316036757935816,1.05418608574999,3.09406629744561,0.340439605753788,0,0.258717367565509,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,10.3255551548033,2.33015277950202,9.48272111636336,0.98931751764888,1.45317984026315,1.56813604813205,0.716234064018819,0.820704498725306,2.62332752966866,0.18542530201051,4.95525554313773,2.68302928352189,3.33350149265481,1.50694765603753,1.91371918809435,4.57556346413045,11.5585332395822,11.7559219951873,6.21899882119907,1.90934123603023,0,0.609958401380546,1.40406943068342,1.04544148007234,0.436725127492355,1.75323650300267,1.81837602595739,1.30877970992015,2.85152941241944,1.86401793926078,0,0,0,0,0.387479470433193,0.506868376472335,0.234714477291508,0.39061315453185,0.629156066554265,0,0.864090018773596,1.26404448251271,1.62180172232131,1.33524244314275,1.03936658382236,1.07416017400489,1.19208812868759,0.600977247599844,1.32920574457119,0.706765149637033,0.685861259894999,0.403304740547362,0.682205165178267,1.15454209968395,1.40252282617883,2.26730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|phase1_expression=0.320297694209588,8.02643437570531,13.1949779422965,7.25914107136392,7.01254021924886,7.89032577985882,6.77476657727024,2.32421982194837,6.335492496825,4.68129052643987,8.90333434772626,4.22792442675283,0.513602189793617,0.34968160967599,1.33243904726265,2.22722794128809,2.09868563438444,3.78554598429885,3.15363197293199,3.39511721438424,3.14660173558958,1.98581902401771,3.6567970479451,11.5194544411253,19.4997888907094,10.3361753540704,9.04600191934057,10.7735616342945,6.27077284206034,3.02436155711917,9.5344119581781,1.90509202037889,0.61506478758457,0,13.5760261283099,3.49092755252834,13.8835162258411,1.67412652294763,4.6880120671428,1.57057123192139,10.5881667845583,6.83045484958446,6.79714494243615,38.9021167544534,60.0151432819526,30.8358543631625,11.7358701652206,2.8343270329458,14.2796018777407,11.665793944457,5.17949760013841,8.62515386189829,1.17447824240415,0,0.336093799142464,12.6057123657614,13.1805382371828,7.21940929188419,0,0,0,15.5868484751801,8.00365316500025,39.1456377017409,41.5323872278129,26.2877642530057,17.6764065205859,10.373894243682,0.103689612308478,0,0,0,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.883885756421003,0.711858403995515,0,12.343369513309,14.434167980396,9.56552812715537,1.72084775396277,178.832460765138,21.0484244738749,20.7928453583254,65.411925516211,2.24711072210803,8.862376774059,6.75443611967459,6.71345191569646,2.39433813620357,8.98285341900225,2.54805239706646,7.11066703153331,25.9789249213457,26.6027858748854,24.7706978057244,10.6191008138726,27.7063535502474,1.7813056687779,0.867426633830679,2.13125834818499,2.30615497256059,1.65794904607885,0.587943535678524,1.25666591329675,2.47194967734374,1.44599356919912,4.42305275974937,0.485300549842228,2.42925670306433,0.969750506270444,5.59175283654366,0,0,7.15279754584056,7.6681679683789,1.79970819298022,2.92261522268049,0,0.915001205637253,0.125654352112864,0,0,0,0,0.611036183101898,5.22509276562391,3.79084137650512,0.210441855886474,0.260240885925407,0.229902104433473,0,0.150704817835715,0.680364991513279,0.768682321709099,0.374806898238915,0.258703370739016,0.215567992932842,0,0,0.43839146485515,1.11218899690239,1.39300866608867,0.411564272815887,0,0,0.772043721344145,1.13665399758237,0.414251545071004,1.17263029990548,0.540186184383045,0.710234206755631,0.393528463494808,1.23413690309903,0.930135779001631,0.268273401399619,1.40118410840603,0.493679549740441,1.64167464079095,0.729619285912702,0.730999937126662,1.75640092232841,0.939444931322602,0.420579897128254,0.102904612379284,23.7901523748335,5.02456076660734,0,0.232236671860439,0.515469845288373,0.201683524623343,0.22237804384487,0.380451252225118,1.89811624617805,0.494096864172033,1.00534083520108,1.79060824837036,1.75467678407208,3.59527763461689,2.37751854862164,3.58454291857861,0.569003702859245,0.456994050438915,0,0.814605311381257,0.193952487167626,0.420814919341911,0.758838445491087,0.590440591918409,0.31399745568275,0.987177311374404,3.26097889795864,0.333690211432188,0.982794975566015,0,0.608580364165509,1.4470629585145,1.01850340712568,0.575392274901621,2.59416362840057,2.47105271869273,2.87536413054709,1.86070473834252,1.87222603868736,2.52578877947112,2.69096120282868,6.27176577772377,3.14080423283228,0.37898282354097,0.325929952884052,0.339490171550376,0,0.502518772325447,0.952174563544055,2.34160377429359,1.7339865851681,1.55025282754142,1.75400245523236,3.11340297959902,4.83517949224508,2.60368305446721,27.142431109069,21.2123216689297,0.491764273019036,1.65562047782839,0,0,0.163934945376675,1.26235463602186,1.26203287766503,0.390438744296638,0.861693590931196,3.82350076724083,4.67877215573028,5.09537755419898,2.02405350837447,2.92255857911312,2.37172666767914,0,3.54850213020672,0.35613120733451,0.81443479676788,4.45419332025846,1.32745138339963,0,0.604647113929502,0.377210159511796,0.590603785761546,1.22974059177571,1.80899805217755,2.18120237686503,0.356497378384721,0.316036757935816,1.05418608574999,3.09406629744561,0.340439605753788,0,0.258717367565509,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,10.3255551548033,2.33015277950202,9.48272111636336,0.98931751764888,1.45317984026315,1.56813604813205,0.716234064018819,0.820704498725306,2.62332752966866,0.18542530201051,4.95525554313773,2.68302928352189,3.33350149265481,1.50694765603753,1.91371918809435,4.57556346413045,11.5585332395822,11.7559219951873,6.21899882119907,1.90934123603023,0,0.609958401380546,1.40406943068342,1.04544148007234,0.436725127492355,1.75323650300267,1.81837602595739,1.30877970992015,2.85152941241944,1.86401793926078,0,0,0,0,0.387479470433193,0.506868376472335,0.234714477291508,0.39061315453185,0.629156066554265,0,0.864090018773596,1.26404448251271,1.62180172232131,1.33524244314275,1.03936658382236,1.07416017400489,1.19208812868759,0.600977247599844,1.32920574457119,0.706765149637033,0.685861259894999,0.403304740547362,0.682205165178267,1.15454209968395,1.40252282617883,2.26730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|short_description=p5@Vmp1
|short_description=p5@Vmp1
}}
}}

Latest revision as of 21:37, 25 September 2015

Short description:p5@Vmp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Vmp1_5end
Coexpression cluster:MCL_coexpression_mm9:2732
Association with transcript: 14bp_to_ENSMUST00000145846_5end
EntrezGene:Vmp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Vmp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.89
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.50
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I210.77
Ileum epithelium, pool1.CNhs13199.10252-104B96.27
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D838.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D960.02
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B330.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.28
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.61
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.18
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.59
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C739.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E741.53
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D226.29
Mouse Microglia, donor1.CNhs12629.11718-123C817.68
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D912.34
Mouse Schwann, donor2.CNhs12573.11746-123F914.43
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C4178.83
Mouse hepatocyte, donor3.CNhs12615.11637-122C821.05
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F665.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G125.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G226.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G324.77
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.62
accessory axillary lymph node, adult.CNhs10475.1063-29H927.71
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.67
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.23
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I323.79
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C74.84
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A127.14
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.21
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I73.55
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I710.33
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F89.48
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G24.96
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.22
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F510.89
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell6.08e-1325
endodermal cell2.63e-1220
motile cell2.93e-1254
endo-epithelial cell8.03e-0915
connective tissue cell1.35e-0846
mesenchymal cell1.35e-0846
embryonic cell3.02e-0770

Uber anatomy
Ontology termp-valuen
endoderm-derived structure5.91e-11118
endoderm5.91e-11118
presumptive endoderm5.91e-11118
digestive system2.33e-10116
digestive tract2.33e-10116
primitive gut2.33e-10116
organ component layer3.77e-1024
subdivision of digestive tract1.81e-09114
unilaminar epithelium5.61e-0966
mucosa1.16e-0815
connective tissue1.35e-0846
intestinal mucosa1.99e-0713
wall of intestine1.99e-0713
gastrointestinal system mucosa1.99e-0713
musculoskeletal system3.17e-0732
trunk mesenchyme4.24e-0745
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