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FFCP PHASE1:Mm9::chr15:98465161..98465166,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12297
|EntrezGene=12297
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=G5E821
|UniProt=G5E821
|association_with_transcript=-28bp_to_ENSMUST00000003442,NM_007581,uc007xnc.1,uc011zza.1_5end
|association_with_transcript=-28bp_to_ENSMUST00000003442,NM_007581,uc007xnc.1,uc011zza.1_5end
|cluster_id=chr15:98465161..98465166,+
|description=CAGE_peak_7_at_Cacnb3_5end
|description=CAGE_peak_7_at_Cacnb3_5end
|id=chr15:98465161..98465166,+
|id=chr15:98465161..98465166,+
|ontology_enrichment_celltype=CL:0000055!1.30e-09!50;CL:0000221!1.65e-09!44;CL:0000133!1.65e-09!44;CL:0002319!2.29e-09!43;CL:0000393!1.13e-08!39;CL:0000211!1.13e-08!39;CL:0000540!6.93e-08!33;CL:0000047!6.93e-08!33;CL:0000031!6.93e-08!33;CL:0000404!6.93e-08!33;CL:0000117!1.41e-07!23;CL:0000337!1.41e-07!23
|ontology_enrichment_celltype_v019_2=CL:0002609,1.26e-17,6;CL:0000117,1.56e-15,23;CL:0000337,1.56e-15,23;CL:0000540,4.33e-10,33;CL:0000047,4.33e-10,33;CL:0000031,4.33e-10,33;CL:0000404,4.33e-10,33;CL:0002608,7.62e-10,3;CL:0000120,4.76e-09,3;CL:0002319,1.60e-08,43;CL:0002613,2.01e-08,3;CL:0000221,2.86e-08,44;CL:0000133,2.86e-08,44;CL:0000393,3.59e-08,39;CL:0000211,3.59e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.30e-20!75;UBERON:0001016!1.30e-20!75;UBERON:0001017!5.86e-20!73;UBERON:0005743!5.86e-20!73;UBERON:0004121!7.54e-20!102;UBERON:0000924!7.54e-20!102;UBERON:0006601!7.54e-20!102;UBERON:0000033!2.03e-18!63;UBERON:0001049!2.09e-17!52;UBERON:0005068!2.09e-17!52;UBERON:0006241!2.09e-17!52;UBERON:0007135!2.09e-17!52;UBERON:0000955!7.05e-17!50;UBERON:0006238!7.05e-17!50;UBERON:0002346!7.80e-17!71;UBERON:0003075!7.80e-17!71;UBERON:0007284!7.80e-17!71;UBERON:0002616!3.30e-16!49;UBERON:0003056!7.24e-16!49;UBERON:0003080!2.63e-14!40;UBERON:0002780!8.45e-14!39;UBERON:0001890!8.45e-14!39;UBERON:0006240!8.45e-14!39;UBERON:0002020!4.36e-12!34;UBERON:0002791!4.36e-12!29;UBERON:0003528!4.36e-12!29;UBERON:0001893!4.36e-12!29;UBERON:0007811!1.41e-11!86;UBERON:0000153!1.56e-10!94;UBERON:0000956!2.52e-09!21;UBERON:0001869!2.52e-09!21;UBERON:0000203!2.52e-09!21;UBERON:0002619!8.00e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0003528,3.21e-32,29;UBERON:0002791,3.21e-32,29;UBERON:0001893,3.21e-32,29;UBERON:0002020,7.24e-27,34;UBERON:0002780,2.18e-25,39;UBERON:0001890,2.18e-25,39;UBERON:0006240,2.18e-25,39;UBERON:0000955,3.40e-25,47;UBERON:0006238,3.40e-25,47;UBERON:0000956,9.19e-25,21;UBERON:0001869,9.19e-25,21;UBERON:0000203,9.19e-25,21;UBERON:0003080,1.21e-24,40;UBERON:0002616,3.18e-23,46;UBERON:0001017,1.71e-21,73;UBERON:0003056,2.27e-21,49;UBERON:0001016,8.86e-21,75;UBERON:0001049,5.11e-20,52;UBERON:0005068,5.11e-20,52;UBERON:0006241,5.11e-20,52;UBERON:0007135,5.11e-20,52;UBERON:0000073,4.16e-19,54;UBERON:0002346,4.90e-17,64;UBERON:0003075,4.90e-17,64;UBERON:0007284,4.90e-17,64;UBERON:0004121,1.14e-16,95;UBERON:0000924,1.14e-16,95;UBERON:0006601,1.14e-16,95;UBERON:0002619,1.62e-15,17;UBERON:0010371,2.36e-14,73;UBERON:0000369,1.08e-13,5;UBERON:0002435,1.08e-13,5;UBERON:0000204,1.08e-13,5;UBERON:0010082,1.08e-13,5;UBERON:0001954,9.14e-11,7;UBERON:0003022,9.14e-11,7;UBERON:0002421,9.14e-11,7;UBERON:0000349,9.14e-11,7;UBERON:0002600,9.14e-11,7;UBERON:0010314,2.05e-10,92;UBERON:0002420,1.85e-08,8;UBERON:0007245,1.85e-08,8;UBERON:0010009,1.85e-08,8;UBERON:0010011,1.85e-08,8;UBERON:0000454,1.85e-08,8;UBERON:0002021,7.08e-07,10;UBERON:0000411,7.08e-07,10;UBERON:0001950,7.08e-07,10
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.0992909512008853,0.261199789138935,0.639969691173627,0.68822784320151,1.14846392823004,0.430761996159075,0.215471232685889,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.367093504323363,0.782391344348039,0.65407546914134,0.439372365468944,0.388859798148567,0.419959264876088,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,1.21389876515759,1.05798195854407,1.90149421051854,0.677689064138264,0,0,0,0,0.299600110518405,1.15265491596466,1.34796496001021,1.4850653216486,1.47227472945967,0.285650984403804,0.441737081903227,1.46988959057945,1.91690942036473,1.83843757322004,0,0.255374676170375,0.768032666281217,1.05509030184155,1.28082701043374,1.04182674111352,0.837548997004143,0,0.61119299110724,0,0.711858403995515,0.931997229126503,0.37863096666592,0.906858721281426,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.422530259330042,0,2.54805239706646,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.452167921657868,0,0.125666591329675,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0.510914110417183,0,0,0,0.898743836428936,1.37250180845588,1.7591609295801,2.25971616249959,2.55715457330331,0.83115217823824,0.648965052271031,0.509196819251581,0.124406970610093,0,0,0.520481771850815,0.919608417733892,0.180062129805349,0.452114453507145,0.680364991513279,1.0249097622788,0.937017245597288,0.517406741478031,0.431135985865684,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.823128545631774,0.199034266818493,0,0,0,0,0,0.540186184383045,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,1.89260953707715,1.44066457330998,0,0,0.639864751605702,0.232236671860439,0.38660238396628,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,1.13800740571849,0.228497025219458,0,0.407302655690628,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.162964976442026,0,0.469380496577004,0,0.238043640886014,0.390267295715598,0.788175720530955,0.221464689648775,0.159454768657487,0,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,1.28440471990234,0.468846746368813,0.327869890753351,0,0,0.390438744296638,0.861693590931196,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,0.876767573733936,0,1.60660658210904,0.425820255624806,0.178065603667255,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,1.03486947026204,0.643011105094777,0.709360934569094,0.535106452806212,0.658196082408484,0.304464949114599,0.704015124191131,0.21183207086382,0.220528398054962,0,0.484393280087717,0.482503399425247,0.238744688006273,0.164140899745061,0.582961673259701,0.741701208042039,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,0.756037385752609,0.209088296014469,0.218362563746178,0.674321731924103,0,0.26175594198403,0.648074866458964,0,0,0.448549638131936,0.330916980914195,0.388902376688095,0.774958940866387,0.337912250981556,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.295379054349154,0.302899349844443,0.15241361331,0,0.194915761479505,0.384847366561318,0.116876902181569,0.453460767230423,0,0.269141569828427,0.167884616364078,0.579568782096571,0.93841237725591,0,0.428736758158132,0.501572104035363,0,0,0.572895513439397,1.20297227640581,1.37016503954128,2.2661816921691,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0.31136204275253,1.19707462020309,0.341467211508268,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0.64183841918363,0.252697211763798,0,0,0.37456602987953,0.192075457214608,0.114870937911227,0,0.695305955669133,0.964546102318525,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.830445126869219,0.492522411877817,0.818462086339379,0.309873682371932,0.385813221962283,0.749431733813838,0,0.429742108096597,0.191288332068843,0.441182838239031,0
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.0992909512008853,0.261199789138935,0.639969691173627,0.68822784320151,1.14846392823004,0.430761996159075,0.215471232685889,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.367093504323363,0.782391344348039,0.65407546914134,0.439372365468944,0.388859798148567,0.419959264876088,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,1.21389876515759,1.05798195854407,1.90149421051854,0.677689064138264,0,0,0,0,0.299600110518405,1.15265491596466,1.34796496001021,1.4850653216486,1.47227472945967,0.285650984403804,0.441737081903227,1.46988959057945,1.91690942036473,1.83843757322004,0,0.255374676170375,0.768032666281217,1.05509030184155,1.28082701043374,1.04182674111352,0.837548997004143,0,0.61119299110724,0,0.711858403995515,0.931997229126503,0.37863096666592,0.906858721281426,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.422530259330042,0,2.54805239706646,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.452167921657868,0,0.125666591329675,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0.510914110417183,0,0,0,0.898743836428936,1.37250180845588,1.7591609295801,2.25971616249959,2.55715457330331,0.83115217823824,0.648965052271031,0.509196819251581,0.124406970610093,0,0,0.520481771850815,0.919608417733892,0.180062129805349,0.452114453507145,0.680364991513279,1.0249097622788,0.937017245597288,0.517406741478031,0.431135985865684,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.823128545631774,0.199034266818493,0,0,0,0,0,0.540186184383045,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,1.89260953707715,1.44066457330998,0,0,0.639864751605702,0.232236671860439,0.38660238396628,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,1.13800740571849,0.228497025219458,0,0.407302655690628,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.162964976442026,0,0.469380496577004,0,0.238043640886014,0.390267295715598,0.788175720530955,0.221464689648775,0.159454768657487,0,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,1.28440471990234,0.468846746368813,0.327869890753351,0,0,0.390438744296638,0.861693590931196,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,0.876767573733936,0,1.60660658210904,0.425820255624806,0.178065603667255,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,1.03486947026204,0.643011105094777,0.709360934569094,0.535106452806212,0.658196082408484,0.304464949114599,0.704015124191131,0.21183207086382,0.220528398054962,0,0.484393280087717,0.482503399425247,0.238744688006273,0.164140899745061,0.582961673259701,0.741701208042039,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,0.756037385752609,0.209088296014469,0.218362563746178,0.674321731924103,0,0.26175594198403,0.648074866458964,0,0,0.448549638131936,0.330916980914195,0.388902376688095,0.774958940866387,0.337912250981556,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.295379054349154,0.302899349844443,0.15241361331,0,0.194915761479505,0.384847366561318,0.116876902181569,0.453460767230423,0,0.269141569828427,0.167884616364078,0.579568782096571,0.93841237725591,0,0.428736758158132,0.501572104035363,0,0,0.572895513439397,1.20297227640581,1.37016503954128,2.2661816921691,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0.31136204275253,1.19707462020309,0.341467211508268,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0.64183841918363,0.252697211763798,0,0,0.37456602987953,0.192075457214608,0.114870937911227,0,0.695305955669133,0.964546102318525,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.830445126869219,0.492522411877817,0.818462086339379,0.309873682371932,0.385813221962283,0.749431733813838,0,0.429742108096597,0.191288332068843,0.441182838239031,0
|short_description=p7@Cacnb3
|short_description=p7@Cacnb3
}}
}}

Latest revision as of 13:10, 1 October 2015

Short description:p7@Cacnb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Cacnb3_5end
Coexpression cluster:NA
Association with transcript: -28bp_to_ENSMUST00000003442, NM_007581, uc007xnc.1, uc011zza.1_5end
EntrezGene:Cacnb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Cacnb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain grey matter3.21e-3229
regional part of telencephalon3.21e-3229
telencephalon3.21e-3229
gray matter7.24e-2734
regional part of forebrain2.18e-2539
forebrain2.18e-2539
future forebrain2.18e-2539
brain3.40e-2547
future brain3.40e-2547
cerebral cortex9.19e-2521
cerebral hemisphere9.19e-2521
pallium9.19e-2521
anterior neural tube1.21e-2440
regional part of brain3.18e-2346
central nervous system1.71e-2173
pre-chordal neural plate2.27e-2149
nervous system8.86e-2175
neural tube5.11e-2052
neural rod5.11e-2052
future spinal cord5.11e-2052
neural keel5.11e-2052
regional part of nervous system4.16e-1954
neurectoderm4.90e-1764
neural plate4.90e-1764
presumptive neural plate4.90e-1764
ectoderm-derived structure1.14e-1695
ectoderm1.14e-1695
presumptive ectoderm1.14e-1695
regional part of cerebral cortex1.62e-1517
ecto-epithelium2.36e-1473
corpus striatum1.08e-135
striatum1.08e-135
ventral part of telencephalon1.08e-135
future corpus striatum1.08e-135
Ammon's horn9.14e-117
lobe parts of cerebral cortex9.14e-117
hippocampal formation9.14e-117
limbic system9.14e-117
limbic lobe9.14e-117
structure with developmental contribution from neural crest2.05e-1092
basal ganglion1.85e-088
nuclear complex of neuraxis1.85e-088
aggregate regional part of brain1.85e-088
collection of basal ganglia1.85e-088
cerebral subcortex1.85e-088
occipital lobe7.08e-0710
visual cortex7.08e-0710
neocortex7.08e-0710
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