FFCP PHASE1:Mm9::chr15:78797762..78797765,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:78797762..78797765,+ | |||
|description=CAGE_peak_at_chr15:78797762..78797765,+ | |description=CAGE_peak_at_chr15:78797762..78797765,+ | ||
|id=chr15:78797762..78797765,+ | |id=chr15:78797762..78797765,+ | ||
|ontology_enrichment_celltype=CL:0000117!9.44e-10!23;CL:0000337!9.44e-10!23;CL:0002609!2.73e-08!6;CL:0000540!5.39e-07!33;CL:0000047!5.39e-07!33;CL:0000031!5.39e-07!33;CL:0000404!5.39e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,7.14e-30,3;CL:0000117,1.08e-20,23;CL:0000337,1.08e-20,23;CL:0002609,2.80e-15,6;CL:0000540,2.11e-14,33;CL:0000047,2.11e-14,33;CL:0000031,2.11e-14,33;CL:0000404,2.11e-14,33;CL:0000393,3.64e-12,39;CL:0000211,3.64e-12,39;CL:0002319,5.10e-11,43;CL:0000221,9.17e-11,44;CL:0000133,9.17e-11,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.36e-13!63;UBERON:0003056!1.01e-12!49;UBERON:0002346!1.77e-12!71;UBERON:0003075!1.77e-12!71;UBERON:0007284!1.77e-12!71;UBERON:0004121!1.31e-10!102;UBERON:0000924!1.31e-10!102;UBERON:0006601!1.31e-10!102;UBERON:0001049!3.08e-10!52;UBERON:0005068!3.08e-10!52;UBERON:0006241!3.08e-10!52;UBERON:0007135!3.08e-10!52;UBERON:0001017!5.90e-10!73;UBERON:0005743!5.90e-10!73;UBERON:0000073!2.04e-09!75;UBERON:0001016!2.04e-09!75;UBERON:0000955!5.82e-09!50;UBERON:0006238!5.82e-09!50;UBERON:0003080!1.14e-08!40;UBERON:0002616!2.31e-08!49;UBERON:0000153!2.56e-08!94;UBERON:0002780!4.46e-08!39;UBERON:0001890!4.46e-08!39;UBERON:0006240!4.46e-08!39;UBERON:0007811!5.39e-08!86;UBERON:0002020!7.69e-08!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,3.02e-18,5;UBERON:0002435,3.02e-18,5;UBERON:0000204,3.02e-18,5;UBERON:0010082,3.02e-18,5;UBERON:0003528,2.63e-16,29;UBERON:0002791,2.63e-16,29;UBERON:0001893,2.63e-16,29;UBERON:0002020,6.80e-14,34;UBERON:0002780,4.27e-12,39;UBERON:0001890,4.27e-12,39;UBERON:0006240,4.27e-12,39;UBERON:0003080,8.65e-12,40;UBERON:0002420,1.15e-11,8;UBERON:0007245,1.15e-11,8;UBERON:0010009,1.15e-11,8;UBERON:0010011,1.15e-11,8;UBERON:0000454,1.15e-11,8;UBERON:0002616,3.15e-10,46;UBERON:0000955,5.24e-10,47;UBERON:0006238,5.24e-10,47;UBERON:0003056,1.37e-09,49;UBERON:0001049,5.04e-09,52;UBERON:0005068,5.04e-09,52;UBERON:0006241,5.04e-09,52;UBERON:0007135,5.04e-09,52;UBERON:0000073,1.11e-08,54;UBERON:0001017,2.57e-08,73;UBERON:0001016,4.38e-08,75;UBERON:0000956,9.04e-08,21;UBERON:0001869,9.04e-08,21;UBERON:0000203,9.04e-08,21;UBERON:0002346,2.77e-07,64;UBERON:0003075,2.77e-07,64;UBERON:0007284,2.77e-07,64 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,1.14058573539325,1.4850653216486,0.420649922702764,0,0,0.61245399607477,0.862609239164127,2.75765635983006,0,0,0,1.18697658957174,1.64677758484337,1.56274011167028,0,0,0,0.294628585473668,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0,0,0.203678727700633,0,0,0,0.520481771850815,0.229902104433473,0.180062129805349,0.60281927134286,0.408218994907967,0.768682321709099,0.468508622798644,0,0.646703978798527,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0,0,0,0.337912250981556,0.117357238645754,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0,0,0.415149390336707,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.347652977834566,0,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.394017929502254,0,0.309873682371932,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,1.14058573539325,1.4850653216486,0.420649922702764,0,0,0.61245399607477,0.862609239164127,2.75765635983006,0,0,0,1.18697658957174,1.64677758484337,1.56274011167028,0,0,0,0.294628585473668,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0,0,0.203678727700633,0,0,0,0.520481771850815,0.229902104433473,0.180062129805349,0.60281927134286,0.408218994907967,0.768682321709099,0.468508622798644,0,0.646703978798527,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0,0,0,0.337912250981556,0.117357238645754,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0,0,0.415149390336707,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.347652977834566,0,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.394017929502254,0,0.309873682371932,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:78797762..78797765,+ | |short_description=p@chr15:78797762..78797765,+ | ||
}} | }} |
Latest revision as of 14:57, 5 August 2015
Short description: | p@chr15:78797762..78797765, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78797762..78797765, + |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 7.14e-30 | 3 |
CNS neuron (sensu Vertebrata) | 1.08e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-20 | 23 |
neuron of cerebral cortex | 2.80e-15 | 6 |
neuron | 2.11e-14 | 33 |
neuronal stem cell | 2.11e-14 | 33 |
neuroblast | 2.11e-14 | 33 |
electrically signaling cell | 2.11e-14 | 33 |
electrically responsive cell | 3.64e-12 | 39 |
electrically active cell | 3.64e-12 | 39 |
neural cell | 5.10e-11 | 43 |
ectodermal cell | 9.17e-11 | 44 |
neurectodermal cell | 9.17e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 3.02e-18 | 5 |
striatum | 3.02e-18 | 5 |
ventral part of telencephalon | 3.02e-18 | 5 |
future corpus striatum | 3.02e-18 | 5 |
brain grey matter | 2.63e-16 | 29 |
regional part of telencephalon | 2.63e-16 | 29 |
telencephalon | 2.63e-16 | 29 |
gray matter | 6.80e-14 | 34 |
regional part of forebrain | 4.27e-12 | 39 |
forebrain | 4.27e-12 | 39 |
future forebrain | 4.27e-12 | 39 |
anterior neural tube | 8.65e-12 | 40 |
basal ganglion | 1.15e-11 | 8 |
nuclear complex of neuraxis | 1.15e-11 | 8 |
aggregate regional part of brain | 1.15e-11 | 8 |
collection of basal ganglia | 1.15e-11 | 8 |
cerebral subcortex | 1.15e-11 | 8 |
regional part of brain | 3.15e-10 | 46 |
brain | 5.24e-10 | 47 |
future brain | 5.24e-10 | 47 |
pre-chordal neural plate | 1.37e-09 | 49 |
neural tube | 5.04e-09 | 52 |
neural rod | 5.04e-09 | 52 |
future spinal cord | 5.04e-09 | 52 |
neural keel | 5.04e-09 | 52 |
regional part of nervous system | 1.11e-08 | 54 |
central nervous system | 2.57e-08 | 73 |
nervous system | 4.38e-08 | 75 |
cerebral cortex | 9.04e-08 | 21 |
cerebral hemisphere | 9.04e-08 | 21 |
pallium | 9.04e-08 | 21 |
neurectoderm | 2.77e-07 | 64 |
neural plate | 2.77e-07 | 64 |
presumptive neural plate | 2.77e-07 | 64 |