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FFCP PHASE1:Mm9::chr15:58720824..58720866,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=75841
|EntrezGene=75841
|HGNC=
|HGNC=
|MCL_coexpression_id=2784
|TSSclassifier=NA
|UniProt=Q7TMV1
|UniProt=Q7TMV1
|association_with_transcript=40bp_to_ENSMUST00000036904,NM_175226,uc007vtq.2_5end
|association_with_transcript=40bp_to_ENSMUST00000036904,NM_175226,uc007vtq.2_5end
|cluster_id=chr15:58720824..58720866,+
|description=CAGE_peak_2_at_Rnf139_5end
|description=CAGE_peak_2_at_Rnf139_5end
|id=chr15:58720824..58720866,+
|id=chr15:58720824..58720866,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!4.28e-13!22;UBERON:0007499!4.28e-13!22;UBERON:0006925!4.28e-13!22;UBERON:0009497!4.28e-13!22;UBERON:0000015!4.28e-13!22;UBERON:0002423!4.28e-13!22;UBERON:0006235!4.28e-13!22;UBERON:0008835!4.28e-13!22;UBERON:0003894!4.28e-13!22;UBERON:0004161!4.28e-13!22;UBERON:0008836!4.28e-13!22;UBERON:0002365!8.65e-13!25;UBERON:0002330!8.65e-13!25;UBERON:0005172!3.32e-12!49;UBERON:0005173!3.32e-12!49;UBERON:0002417!3.32e-12!49;UBERON:0000916!3.32e-12!49;UBERON:0005256!4.50e-12!47;UBERON:0003914!5.10e-12!47;UBERON:0009854!1.61e-11!23;UBERON:0009856!1.61e-11!23;UBERON:0004119!2.95e-11!130;UBERON:0000925!2.95e-11!130;UBERON:0006595!2.95e-11!130;UBERON:0001007!9.19e-11!128;UBERON:0001555!9.19e-11!128;UBERON:0007026!9.19e-11!128;UBERON:0004921!3.74e-10!126;UBERON:0004185!3.74e-10!126;UBERON:0002100!2.90e-09!98;UBERON:0009569!3.47e-09!66;UBERON:0003104!4.99e-09!131;UBERON:0009142!4.99e-09!131;UBERON:0004923!1.02e-07!24;UBERON:0005409!2.46e-07!59;UBERON:0005177!2.84e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.94e-13,61;UBERON:0009142,1.94e-13,61;UBERON:0002107,4.27e-13,22;UBERON:0007499,4.27e-13,22;UBERON:0006925,4.27e-13,22;UBERON:0009497,4.27e-13,22;UBERON:0000015,4.27e-13,22;UBERON:0002423,4.27e-13,22;UBERON:0006235,4.27e-13,22;UBERON:0008835,4.27e-13,22;UBERON:0003894,4.27e-13,22;UBERON:0004161,4.27e-13,22;UBERON:0008836,4.27e-13,22;UBERON:0002365,8.63e-13,25;UBERON:0002330,8.63e-13,25;UBERON:0005256,1.11e-12,45;UBERON:0005172,3.32e-12,49;UBERON:0005173,3.32e-12,49;UBERON:0002417,3.32e-12,49;UBERON:0000916,3.32e-12,49;UBERON:0002100,4.49e-12,90;UBERON:0003914,5.09e-12,47;UBERON:0009854,1.46e-11,23;UBERON:0009856,1.46e-11,23;UBERON:0004119,2.25e-10,118;UBERON:0000925,2.25e-10,118;UBERON:0006595,2.25e-10,118;UBERON:0001007,6.68e-10,116;UBERON:0001555,6.68e-10,116;UBERON:0007026,6.68e-10,116;UBERON:0005177,1.33e-09,79;UBERON:0004921,2.58e-09,114;UBERON:0009569,3.46e-09,66;UBERON:0004923,1.02e-07,24;UBERON:0005409,5.99e-07,47
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7090629764,5.85447228840512,4.80397640241591,7.8221320903196,7.60411792673091,13.0877970992015,8.16574331738295,7.45607175704311,2.81846469342095,2.39226473670366,1.98550188548517,3.50012139019286,2.84151611651008,2.53434188236167,3.99014611395563,3.77592716047455,2.83120229949419,2.89900944991207,4.32045009386798,3.47612232690996,2.02725215290164,2.2596410576262,1.68897069871134,4.11761400035207,2.98022032171897,1.56254084375959,2.21534290761866,2.52416124870369,2.51482461961499,1.61321896218945,3.02119430293232,2.98256709085021,3.15567635890236,8.84248496099324,5.54964883435162,3.58855426437903,10.744615447301,5.02292944483695,12.7624083306804,7.3260649706906,7.71726164684637,9.5298699766719,0,2.76195141904306,2.29158205375759,3.09335728218638,4.11049511862385,3.7769694869485,0.675022500231806,2.2516060161211,3.17199686288943,0.51776031175182,0.830298780673413,3.99024873401031,3.07320490357441,7.05009479498053,2.93458427679175,2.38996560985018,4.4449345560323,5.15087643097235,4.49286893428541,5.30664144703975,5.0695859978048,5.65879024158229,6.83583004530142,5.76226371643823,5.85841783347255,8.57328644309533,7.41659686047075,6.75182271622968,8.24171801606613,4.56316652416632,4.11443102862498,8.16388708332953,5.96090474868302,6.54058874845478,6.02300034658116,6.76916863133412,4.39027134894654,5.78753365163254,5.56796866768033,7.2948495315506,6.64356101495375,6.10727790728493,6.13846564754534,4.95797891795091,5.01557188550968,2.24829520144151,8.88940112092552,8.59484216193193,5.35607329792761,8.16188250742207,11.3615239454007
|phase1_expression=4.32401887182944,10.8182376368202,13.6499771816861,15.1232105653415,16.0286633582831,8.39396359559449,5.37309073369709,10.8463591690924,24.7788150986933,28.7899367376052,4.45166717386313,5.2649624936922,8.38883576662908,9.09172185157573,32.9778664197506,36.4455481301687,51.7675789814828,7.72882305127682,7.40417941470989,14.8536378129311,3.99703463710028,2.08510997521859,2.61199789138935,11.6794468639187,11.0116454912242,10.9104073181854,9.90752591165872,10.3426191689227,18.2422482678119,20.6664706403143,15.0776747245607,6.98533740805594,3.69038872550742,0,2.88851619751275,9.64160943079256,5.9209113316087,8.78916424547506,8.5946887897618,5.75876118371178,5.88231488031014,4.78131839470912,3.88408282424923,15.9888958828983,16.2203089951223,16.702754446713,5.47673941043627,1.74420125104357,4.17403747195497,5.8328969722285,3.49966054063406,4.31257693094915,12.5836954543302,8.70434570413613,8.06625117941913,5.91696702882678,8.30946975822394,12.3761302146586,1.82084814773638,0,0.633831403506179,3.38844532069132,2.66788438833342,1.7997994345628,3.9554654502679,2.8419204597844,2.69640099466564,1.53687322128622,1.03689612308478,0.675029691658453,0.210324961351382,2.57085885963423,1.32521124570968,0.734944795289724,0.575072826109418,0.919218786610021,2.20231761998777,3.19218345212969,2.91852413186863,0.659431438650969,0.548925861614458,0.52091337055676,5.02529398202486,5.06486349028512,4.12555268997387,2.65165726926301,2.98980529678116,0.931997229126503,6.96680978665293,7.25486977025141,10.7249860819621,25.8127163094416,33.9985666853875,26.9851595818909,49.3830077260229,56.8994146613616,13.6231087527799,4.60161870960756,6.49465011507172,4.59341446863442,4.78867627240714,2.56652954828636,2.54805239706646,7.11066703153331,4.32982082022428,5.82727690592727,7.07734223020697,15.7573754012303,4.66088190564909,8.31275978763019,4.16364784238726,2.43572382649713,5.5347719341454,5.12456977878917,6.58496759959947,9.04799457573663,11.8653584512499,14.4599356919912,16.8076004870476,10.3530783966342,18.9923705875938,20.3647606316793,0,5.5628351432194,3.35114730901528,13.0283098156382,4.19352935770721,1.19980546198682,2.66847476853436,3.59497534571574,0.915001205637253,2.26177833803156,3.30266208365325,3.3243009452943,2.28566849015516,4.05603157669394,6.21220119486929,11.1966273549084,4.0435641349388,9.25944165900485,1.43132487258974,2.29902104433473,1.80062129805349,2.56198190320716,2.17716797284249,1.66547836370305,3.09215691047105,6.72628763921441,0.215567992932842,1.89106080167819,2.63926686245923,2.41115305670332,1.94633074457919,5.57203466435466,5.76189981942242,2.7864797354589,2.1066395619397,2.05878325691772,2.84163499395593,2.69263504296152,3.04883877975425,3.78130329068131,2.84093682702252,4.52557733019029,3.23960937063494,5.58081467400979,7.24338183778972,7.12268588439734,5.9241545968853,9.19337798842933,10.9442892886905,10.0877991323479,12.7339066868809,13.4206418760372,2.94405927989778,2.26390147234426,31.7202031664446,17.4537373997939,1.70630600428187,3.0190767341857,3.99489130098489,4.03367049246685,7.33847544688072,13.5060194539917,17.0830462156024,10.0466362381647,9.0480675168097,7.95825888164603,9.55324026883689,9.88701349519644,14.0489732418551,14.7364542208232,2.84501851429623,3.77020091612105,11.270773567308,3.86937522906097,3.68509725618489,5.82127305089644,7.27220176928959,10.775540802511,14.4438829614065,12.5865107200237,35.870767877545,17.1850458887577,19.4593405162071,25.8591429242582,27.1832562660594,26.2883104130134,27.2449661406119,23.8787794084173,15.0785760900783,14.2771934857802,10.0637744569148,13.0249331683976,10.9213185590096,21.7217835034516,20.8100999685418,32.3237159313456,12.0089573608293,3.03186258832776,2.60743962307241,2.37643120085263,1.64283173801951,4.02015017860358,5.47500374037832,6.82967767502296,4.09851374676097,2.43611158613652,6.05928120898451,8.35702905050264,8.46156411142888,8.67894351489069,7.53956419696361,9.24639662491806,8.85175691434265,5.79467167239938,3.37156238974363,5.04010252346474,4.09837363441689,20.4501451035542,3.78609863299508,2.34263246577983,2.58508077279359,3.34556317133573,1.11399337041197,4.24614796183249,2.02405350837447,5.26060544240361,2.37172666767914,1.60660658210904,6.24536374916382,2.67098405500883,5.21238269931443,6.26886467295635,6.63725691699814,3.39892890616974,5.13950046840077,5.65815239267694,2.36241514304618,6.7635732547664,9.8202751403924,10.5424781548477,7.48644494607915,12.3254335594968,9.48767477174989,9.28219889233682,3.06395645178409,1.62054984628179,1.94038025674132,3.42939256050548,4.96552654198366,6.42127743367454,4.44282355625727,3.95804433848979,7.50949465803873,13.3454204644207,9.48272111636336,3.46261131177108,4.19807509409354,4.52346936961169,4.17803204010978,4.59594519286172,13.699599321603,4.07935664423121,24.0927941924972,4.74689796315412,10.7412825874433,29.9505846637459,24.3315725343425,31.5713879025001,8.66889992968662,6.85762116385924,8.01559848065658,10.5013767981662,2.37251995185852,5.48962561242491,3.45617090629764,5.85447228840512,4.80397640241591,7.8221320903196,7.60411792673091,13.0877970992015,8.16574331738295,7.45607175704311,2.81846469342095,2.39226473670366,1.98550188548517,3.50012139019286,2.84151611651008,2.53434188236167,3.99014611395563,3.77592716047455,2.83120229949419,2.89900944991207,4.32045009386798,3.47612232690996,2.02725215290164,2.2596410576262,1.68897069871134,4.11761400035207,2.98022032171897,1.56254084375959,2.21534290761866,2.52416124870369,2.51482461961499,1.61321896218945,3.02119430293232,2.98256709085021,3.15567635890236,8.84248496099324,5.54964883435162,3.58855426437903,10.744615447301,5.02292944483695,12.7624083306804,7.3260649706906,7.71726164684637,9.5298699766719,0,2.76195141904306,2.29158205375759,3.09335728218638,4.11049511862385,3.7769694869485,0.675022500231806,2.2516060161211,3.17199686288943,0.51776031175182,0.830298780673413,3.99024873401031,3.07320490357441,7.05009479498053,2.93458427679175,2.38996560985018,4.4449345560323,5.15087643097235,4.49286893428541,5.30664144703975,5.0695859978048,5.65879024158229,6.83583004530142,5.76226371643823,5.85841783347255,8.57328644309533,7.41659686047075,6.75182271622968,8.24171801606613,4.56316652416632,4.11443102862498,8.16388708332953,5.96090474868302,6.54058874845478,6.02300034658116,6.76916863133412,4.39027134894654,5.78753365163254,5.56796866768033,7.2948495315506,6.64356101495375,6.10727790728493,6.13846564754534,4.95797891795091,5.01557188550968,2.24829520144151,8.88940112092552,8.59484216193193,5.35607329792761,8.16188250742207,11.3615239454007
|short_description=p2@Rnf139
|short_description=p2@Rnf139
}}
}}

Latest revision as of 20:41, 26 September 2015

Short description:p2@Rnf139
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rnf139_5end
Coexpression cluster:MCL_coexpression_mm9:2784
Association with transcript: 40bp_to_ENSMUST00000036904, NM_175226, uc007vtq.2_5end
EntrezGene:Rnf139
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rnf139

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I315.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.39
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E724.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F228.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.26
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.39
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A132.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A336.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A551.77
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.40
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.01
GP2+ M cell, pool1.CNhs13228.11845-124H910.91
GP2+ M cell, pool2.CNhs13231.11846-124I19.91
GP2+ M cell, pool3.CNhs13240.11847-124I210.34
Ileum epithelium, pool1.CNhs13199.10252-104B918.24
Ileum epithelium, pool2.CNhs13232.10253-104C120.67
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.64
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.70
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.58
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.31
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.38
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D96.97
Mouse Schwann, donor2.CNhs12573.11746-123F97.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.72
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F725.81
Mouse hepatocyte, donor1.CNhs13078.11714-123C434.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C826.99
Mouse hepatocyte, donor6.CNhs13090.11822-124F449.38
Mouse hepatocyte, donor8.CNhs13091.11824-124F656.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.76
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D78.31
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F55.12
adrenal gland, neonate N00.CNhs11191.1311-23C16.58
adrenal gland, neonate N25.CNhs11223.1377-27I39.05
amnion, adult pregnant day17.5.CNhs10488.583-22A811.87
aorta, adult.CNhs10498.46-23H114.46
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F510.35
bone (os femoris), neonate N16.CNhs11225.1525-43A618.99
bone (os femoris), neonate N20.CNhs11195.1350-25C320.36
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H713.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.67
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.20
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G49.26
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C63.24
heart, embryo E17.CNhs11025.479-18E55.58
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E37.12
heart, neonate N03.CNhs11221.1349-25I25.92
heart, neonate N10.CNhs11118.749-24G19.19
heart, neonate N16.CNhs11209.782-15G110.94
heart, neonate N20.CNhs11127.821-26I610.09
heart, neonate N25.CNhs11196.1351-25D312.73
heart, neonate N30.CNhs11202.1390-42D213.42
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I331.72
intestine, adult.CNhs10496.178-9A317.45
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D83.99
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F713.51
intestine, neonate N00.CNhs11126.644-26D117.08
intestine, neonate N01.CNhs11192.1322-23E910.05
intestine, neonate N06.CNhs11102.688-20B89.05
intestine, neonate N07.CNhs11095.720-20F27.96
intestine, neonate N10.CNhs11098.755-23A59.55
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E314.05
intestine, neonate N30.CNhs11131.1384-42G114.74
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F83.77
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G75.82
kidney, neonate N10.CNhs11206.758-6D57.27
kidney, neonate N20.CNhs11113.832-19I110.78
kidney, neonate N25.CNhs11122.1353-25F314.44
kidney, neonate N30.CNhs11203.1385-42H112.59
liver, adult pregnant day01.CNhs10466.508-5B235.87
liver, embryo E12.CNhs10601.355-15F817.19
liver, embryo E13.CNhs10524.378-3H619.46
liver, embryo E14.CNhs10594.409-16E125.86
liver, embryo E15.CNhs10520.433-16D727.18
liver, embryo E16.CNhs10523.462-17F526.29
liver, embryo E17.CNhs10510.481-18A327.24
liver, embryo E18.CNhs10579.499-43G423.88
liver, neonate N00.CNhs11117.641-24F415.08
liver, neonate N03.CNhs11123.1345-25G214.28
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H213.02
liver, neonate N10.CNhs11115.751-24B910.92
liver, neonate N20.CNhs11220.823-25A321.72
liver, neonate N25.CNhs11198.1368-26H120.81
liver, neonate N30.CNhs11106.1382-42D132.32
lung, adult.CNhs10474.28-22B112.01
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A64.02
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E54.10
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E66.06
lung, neonate N20.CNhs11109.822-18A48.36
lung, neonate N25.CNhs11119.1359-25C78.46
lung, neonate N30.CNhs11133.1394-42H28.68
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.25
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A35.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.10
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C220.45
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I76.25
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I45.21
oviduct, adult pregnant day01.CNhs10500.988-6G66.27
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D87.49
pancreas, neonate N16.CNhs11136.787-43B612.33
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F66.42
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I77.51
placenta, adult pregnant day17.CNhs10464.577-18G313.35
prostate, adult.CNhs10470.859-1F89.48
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G44.20
skin, neonate N03.CNhs11215.662-22H34.52
skin, neonate N06.CNhs11097.693-20I54.18
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I113.70
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G224.09
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F210.74
spleen, neonate N10.CNhs11116.752-24D129.95
spleen, neonate N20.CNhs11112.824-19H124.33
spleen, neonate N25.CNhs11099.1354-25G331.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.02
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G85.49
stomach, embryo E16.CNhs11022.459-17D43.46
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B87.82
stomach, neonate N07.CNhs11210.718-18A97.60
stomach, neonate N25.CNhs11104.1355-25E413.09
stomach, neonate N30.CNhs11134.1386-42I18.17
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I43.78
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I22.26
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A23.02
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G23.16
tongue, adult.CNhs10499.32-1B48.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.59
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.74
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F512.76
uterus, adult.CNhs10509.92-27E57.33
vagina, adult.CNhs10502.89-27D57.72
vesicular gland, adult.CNhs10491.51-27F89.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.54
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.02
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B38.89
whole body, neonate N00.CNhs10525.657-19C28.59
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D18.16
whole body, neonate N10.CNhs10518.761-6B411.36





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mesenchyme1.94e-1361
entire embryonic mesenchyme1.94e-1361
liver4.27e-1322
epithelial sac4.27e-1322
digestive gland4.27e-1322
epithelium of foregut-midgut junction4.27e-1322
anatomical boundary4.27e-1322
hepatobiliary system4.27e-1322
foregut-midgut junction4.27e-1322
hepatic diverticulum4.27e-1322
liver primordium4.27e-1322
septum transversum4.27e-1322
liver bud4.27e-1322
exocrine gland8.63e-1325
exocrine system8.63e-1325
trunk mesenchyme1.11e-1245
abdomen element3.32e-1249
abdominal segment element3.32e-1249
abdominal segment of trunk3.32e-1249
abdomen3.32e-1249
trunk4.49e-1290
epithelial tube5.09e-1247
digestive tract diverticulum1.46e-1123
sac1.46e-1123
endoderm-derived structure2.25e-10118
endoderm2.25e-10118
presumptive endoderm2.25e-10118
digestive system6.68e-10116
digestive tract6.68e-10116
primitive gut6.68e-10116
trunk region element1.33e-0979
subdivision of digestive tract2.58e-09114
subdivision of trunk3.46e-0966
organ component layer1.02e-0724
gastrointestinal system5.99e-0747
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