FFCP PHASE1:Hg19::chr10:48416849..48416859,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2658 | |EntrezGene=2658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4217 | |HGNC=4217 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UK05 | |UniProt=Q9UK05 | ||
|association_with_transcript=0bp_to_ENST00000249598,NM_016204,uc001jfa.1_5end | |association_with_transcript=0bp_to_ENST00000249598,NM_016204,uc001jfa.1_5end | ||
|cluster_id=chr10:48416849..48416859,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_GDF2_5end | |description=CAGE_peak_3_at_GDF2_5end | ||
|id=chr10:48416849..48416859,- | |id=chr10:48416849..48416859,- | ||
|ontology_enrichment_celltype=CL:0002274!9.87e-45!5;CL:0000457!9.87e-45!5;CL:0002191!9.87e-45!5;CL:0000097!9.87e-45!5;CL:0000831!9.87e-45!5;CL:0002028!9.87e-45!5;CL:0000163!4.49e-25!9;CL:0002195!2.31e-08!2;CL:0002571!2.31e-08!2 | |ontology_enrichment_celltype=CL:0002274!9.87e-45!5;CL:0000457!9.87e-45!5;CL:0002191!9.87e-45!5;CL:0000097!9.87e-45!5;CL:0000831!9.87e-45!5;CL:0002028!9.87e-45!5;CL:0000163!4.49e-25!9;CL:0002195!2.31e-08!2;CL:0002571!2.31e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.76e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.94e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.55e-11;11!UBERON:0009497;9.94e-10;13 | |||
|ontology_enrichment_disease=DOID:8552!3.17e-15!1;DOID:1036!4.34e-08!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.02e-19!19;UBERON:0006925!7.02e-19!19;UBERON:0008836!7.02e-19!19;UBERON:0008835!2.58e-16!22;UBERON:0003894!2.58e-16!22;UBERON:0009854!1.32e-15!23;UBERON:0007499!2.32e-14!25;UBERON:0009497!2.32e-14!25;UBERON:0000015!2.32e-14!25;UBERON:0002423!2.32e-14!25;UBERON:0006235!2.32e-14!25;UBERON:0004161!2.32e-14!25;UBERON:0005057!8.25e-14!26;UBERON:0009856!8.25e-14!26;UBERON:0002365!1.39e-11!31;UBERON:0002330!1.39e-11!31;UBERON:0002368!2.95e-10!35;UBERON:0002405!5.19e-09!115;UBERON:0000949!5.77e-08!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.45e-24;19!UBERON:0006925;2.45e-24;19!UBERON:0002423;1.19e-18;25!UBERON:0002365;5.30e-15;31!UBERON:0002330;5.30e-15;31!UBERON:0002368;1.28e-12;33!UBERON:0000949;3.66e-09;43!UBERON:0005172;3.72e-07;52!UBERON:0005173;3.72e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.94e-24,19;UBERON:0006925,2.94e-24,19;UBERON:0008836,2.94e-24,19;UBERON:0008835,4.86e-21,22;UBERON:0003894,4.86e-21,22;UBERON:0009854,3.75e-20,23;UBERON:0007499,1.37e-18,25;UBERON:0009497,1.37e-18,25;UBERON:0000015,1.37e-18,25;UBERON:0002423,1.37e-18,25;UBERON:0006235,1.37e-18,25;UBERON:0004161,1.37e-18,25;UBERON:0009856,6.73e-18,26;UBERON:0002365,4.18e-15,31;UBERON:0002330,4.18e-15,31;UBERON:0002368,1.92e-13,35;UBERON:0000949,1.44e-10,45;UBERON:0003929,6.97e-09,54;UBERON:0005172,6.97e-09,54;UBERON:0005173,6.97e-09,54;UBERON:0002530,3.63e-08,59;UBERON:0002417,4.89e-08,60;UBERON:0000916,4.89e-08,60 | |||
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|short_description=p3@GDF2 | |short_description=p3@GDF2 | ||
}} | }} |
Latest revision as of 08:27, 18 September 2015
Short description: | p3@GDF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GDF2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000249598, NM_016204, uc001jfa.1_5end |
EntrezGene: | GDF2 |
HGNC: | 4217 |
UniProt: | Q9UK05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.94e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.94e-24 | 19 |
digestive gland | 2.94e-24 | 19 |
liver bud | 2.94e-24 | 19 |
hepatic diverticulum | 4.86e-21 | 22 |
liver primordium | 4.86e-21 | 22 |
digestive tract diverticulum | 3.75e-20 | 23 |
epithelial sac | 1.37e-18 | 25 |
epithelium of foregut-midgut junction | 1.37e-18 | 25 |
anatomical boundary | 1.37e-18 | 25 |
hepatobiliary system | 1.37e-18 | 25 |
foregut-midgut junction | 1.37e-18 | 25 |
septum transversum | 1.37e-18 | 25 |
sac | 6.73e-18 | 26 |
exocrine gland | 4.18e-15 | 31 |
exocrine system | 4.18e-15 | 31 |
endocrine gland | 1.92e-13 | 35 |
endocrine system | 1.44e-10 | 45 |
gut epithelium | 6.97e-09 | 54 |
abdomen element | 6.97e-09 | 54 |
abdominal segment element | 6.97e-09 | 54 |
gland | 3.63e-08 | 59 |
abdominal segment of trunk | 4.89e-08 | 60 |
abdomen | 4.89e-08 | 60 |