FFCP PHASE1:Hg19::chr10:3305882..3305893,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3305882..3305893,+ | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_at_chr10:3305882..3305893,+ | |description=CAGE_peak_at_chr10:3305882..3305893,+ | ||
|id=chr10:3305882..3305893,+ | |id=chr10:3305882..3305893,+ | ||
|ontology_enrichment_celltype=CL:1000507!9.05e-15!12;CL:1000494!9.05e-15!12;CL:0002537!1.71e-13!5;CL:0005020!3.17e-11!6;CL:0002138!3.17e-11!6;CL:0005022!3.17e-11!6;CL:1000449!4.90e-11!16;CL:0002541!1.87e-10!3;CL:0002144!2.06e-10!3;CL:1000497!8.65e-10!18;CL:0002518!8.65e-10!18;CL:0000313!5.59e-09!1;CL:0002581!8.78e-09!1;CL:0002139!3.19e-07!24 | |ontology_enrichment_celltype=CL:1000507!9.05e-15!12;CL:1000494!9.05e-15!12;CL:0002537!1.71e-13!5;CL:0005020!3.17e-11!6;CL:0002138!3.17e-11!6;CL:0005022!3.17e-11!6;CL:1000449!4.90e-11!16;CL:0002541!1.87e-10!3;CL:0002144!2.06e-10!3;CL:1000497!8.65e-10!18;CL:0002518!8.65e-10!18;CL:0000313!5.59e-09!1;CL:0002581!8.78e-09!1;CL:0002139!3.19e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.07e-23;1!CL:0002581;4.59e-23;1!CL:0000159;1.48e-12;2!CL:0002541;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.07e-23,1;CL:0002581,4.10e-23,1;CL:0000159,1.48e-12,2;CL:0002541,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;7.91e-10;10!UBERON:0007687;7.91e-10;10 | |||
|ontology_enrichment_disease=DOID:2152!5.59e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.07e-23;1!DOID:4468;1.65e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.07e-23,1;DOID:4468,1.65e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.59e-18!14;UBERON:0000158!6.59e-18!14;UBERON:0002113!5.03e-16!27;UBERON:0003918!5.03e-16!27;UBERON:0005095!5.03e-16!27;UBERON:0007687!5.03e-16!27;UBERON:0003887!9.38e-16!21;UBERON:0009773!9.05e-15!12;UBERON:0001231!9.05e-15!12;UBERON:0004810!9.05e-15!12;UBERON:0000080!7.97e-14!18;UBERON:0002120!7.97e-14!18;UBERON:0004875!7.97e-14!18;UBERON:0005721!7.97e-14!18;UBERON:0005754!7.97e-14!18;UBERON:0007297!7.97e-14!18;UBERON:0000489!2.38e-13!32;UBERON:0004876!2.15e-12!20;UBERON:0004211!4.90e-11!16;UBERON:0001285!4.90e-11!16;UBERON:0007684!4.90e-11!16;UBERON:0003220!4.90e-11!16;UBERON:0004208!4.90e-11!16;UBERON:0000476!1.87e-10!3;UBERON:0000920!1.87e-10!3;UBERON:0001915!2.06e-10!3;UBERON:0001982!2.06e-10!3;UBERON:0006555!2.24e-10!17;UBERON:0005103!2.24e-10!17;UBERON:0000083!2.24e-10!17;UBERON:0009201!2.24e-10!17;UBERON:0004819!2.24e-10!17;UBERON:0006553!2.24e-10!17;UBERON:0003074!2.24e-10!17;UBERON:0003060!2.24e-10!17;UBERON:0000478!3.03e-10!24;UBERON:0000305!8.73e-10!7;UBERON:0003124!9.27e-10!7;UBERON:0000058!2.04e-09!26;UBERON:0006554!2.10e-09!44;UBERON:0005172!3.58e-09!55;UBERON:0005173!3.58e-09!55;UBERON:0001008!3.59e-09!45;UBERON:0004911!5.59e-09!1;UBERON:0004871!1.27e-08!8;UBERON:0001473!1.53e-08!8;UBERON:0004536!1.53e-08!8;UBERON:0006558!1.53e-08!8;UBERON:0000998!1.71e-08!1;UBERON:0006868!1.71e-08!1;UBERON:0006834!1.84e-08!1;UBERON:0002417!3.91e-08!61;UBERON:0000916!3.91e-08!61;UBERON:0004175!5.47e-07!25;UBERON:0002465!6.34e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.07e-23;1!UBERON:0004909;1.48e-12;2!UBERON:0005406;3.06e-12;2!UBERON:0005631;8.84e-10;10!UBERON:0000158;8.84e-10;10!UBERON:0002113;6.39e-09;24!UBERON:0011143;6.39e-09;24!UBERON:0003124;1.35e-08;3!UBERON:0000920;1.35e-08;3!UBERON:0000489;1.74e-07;29!UBERON:0006554;2.96e-07;30!UBERON:0001008;2.96e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.07e-23,1;UBERON:0004909,1.48e-12,2;UBERON:0005406,2.90e-12,2;UBERON:0000920,1.40e-08,3;UBERON:0002113,2.72e-08,26;UBERON:0003918,2.72e-08,26;UBERON:0011143,2.72e-08,26;UBERON:0005095,2.72e-08,26;UBERON:0007687,2.72e-08,26;UBERON:0005631,3.04e-07,14;UBERON:0000158,3.04e-07,14;UBERON:0000489,4.77e-07,31 | |||
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|short_description=p@chr10:3305882..3305893,+ | |short_description=p@chr10:3305882..3305893,+ | ||
}} | }} |
Latest revision as of 13:18, 23 July 2015
Short description: | p@chr10:3305882..3305893, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3305882..3305893, + |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.07e-23 | 1 |
perirenal preadipocyte | 4.10e-23 | 1 |
seromucus secreting cell | 1.48e-12 | 2 |
chorionic membrane mesenchymal stem cell | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.07e-23 | 1 |
epithelium of gonad | 1.48e-12 | 2 |
perirenal fat | 2.90e-12 | 2 |
egg chorion | 1.40e-08 | 3 |
kidney | 2.72e-08 | 26 |
kidney mesenchyme | 2.72e-08 | 26 |
upper urinary tract | 2.72e-08 | 26 |
kidney rudiment | 2.72e-08 | 26 |
kidney field | 2.72e-08 | 26 |
extraembryonic membrane | 3.04e-07 | 14 |
membranous layer | 3.04e-07 | 14 |
cavitated compound organ | 4.77e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.07e-23 | 1 |
clear cell adenocarcinoma | 1.65e-12 | 2 |