Personal tools

FFCP PHASE1:Mm9::chr14:58691117..58691142,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14180
|EntrezGene=14180
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=Q499I9,P54130
|UniProt=Q499I9,P54130
|association_with_transcript=-380bp_to_ENSMUST00000022545,NM_013518,uc007udx.2_5end
|association_with_transcript=-380bp_to_ENSMUST00000022545,NM_013518,uc007udx.2_5end
|cluster_id=chr14:58691117..58691142,+
|description=CAGE_peak_2_at_Fgf9_5end
|description=CAGE_peak_2_at_Fgf9_5end
|id=chr14:58691117..58691142,+
|id=chr14:58691117..58691142,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,2.69e-07,23;CL:0000337,2.69e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.55e-16!71;UBERON:0003075!1.55e-16!71;UBERON:0007284!1.55e-16!71;UBERON:0000033!8.16e-16!63;UBERON:0001049!1.69e-12!52;UBERON:0005068!1.69e-12!52;UBERON:0006241!1.69e-12!52;UBERON:0007135!1.69e-12!52;UBERON:0004121!6.95e-12!102;UBERON:0000924!6.95e-12!102;UBERON:0006601!6.95e-12!102;UBERON:0000955!1.76e-11!50;UBERON:0006238!1.76e-11!50;UBERON:0003056!2.08e-11!49;UBERON:0002616!7.36e-11!49;UBERON:0001017!3.57e-09!73;UBERON:0005743!3.57e-09!73;UBERON:0000073!2.32e-08!75;UBERON:0001016!2.32e-08!75;UBERON:0003080!4.00e-08!40;UBERON:0002021!7.28e-08!10;UBERON:0000411!7.28e-08!10;UBERON:0001950!7.28e-08!10;UBERON:0002780!1.39e-07!39;UBERON:0001890!1.39e-07!39;UBERON:0006240!1.39e-07!39;UBERON:0000153!2.62e-07!94;UBERON:0000489!2.80e-07!21;UBERON:0007811!3.51e-07!86;UBERON:0002020!3.92e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.50e-24,54;UBERON:0002346,3.63e-24,64;UBERON:0003075,3.63e-24,64;UBERON:0007284,3.63e-24,64;UBERON:0010314,3.93e-24,92;UBERON:0004121,9.16e-23,95;UBERON:0000924,9.16e-23,95;UBERON:0006601,9.16e-23,95;UBERON:0010371,2.65e-22,73;UBERON:0001049,4.88e-22,52;UBERON:0005068,4.88e-22,52;UBERON:0006241,4.88e-22,52;UBERON:0007135,4.88e-22,52;UBERON:0001017,1.80e-21,73;UBERON:0001016,1.38e-20,75;UBERON:0000955,8.03e-17,47;UBERON:0006238,8.03e-17,47;UBERON:0003056,9.33e-16,49;UBERON:0002616,1.16e-15,46;UBERON:0002021,1.83e-14,10;UBERON:0000411,1.83e-14,10;UBERON:0001950,1.83e-14,10;UBERON:0002020,4.09e-14,34;UBERON:0003080,2.77e-12,40;UBERON:0003076,7.56e-12,12;UBERON:0003057,7.56e-12,12;UBERON:0002780,2.85e-11,39;UBERON:0001890,2.85e-11,39;UBERON:0006240,2.85e-11,39;UBERON:0003528,2.53e-09,29;UBERON:0002791,2.53e-09,29;UBERON:0001893,2.53e-09,29;UBERON:0002619,4.06e-09,17;UBERON:0002240,6.32e-09,6;UBERON:0005174,6.32e-09,6;UBERON:0001137,6.32e-09,6;UBERON:0000956,3.80e-08,21;UBERON:0001869,3.80e-08,21;UBERON:0000203,3.80e-08,21;UBERON:0004111,1.78e-07,122;UBERON:0001948,1.80e-07,5;UBERON:0002315,1.80e-07,5;UBERON:0000489,4.05e-07,21;UBERON:0000025,8.87e-07,114
|phase1_expression=1.12104192973356,0.348975407639361,0,0.60492842261366,0.500895729946347,0.503637815735669,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,3.42781181284564,3.53389665522582,0,0.0958454710182364,0,2.20231761998777,5.2351808614927,3.5329502648936,0.659431438650969,0.640413505216868,0,6.14202597803038,1.12552522006336,1.06958773443767,5.00868595305235,2.84743361598206,1.4911955666024,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0,0,0,0.22836775943812,0,1.48442139064825,0.346970653532272,1.21786191324856,1.15307748628029,0.60289056221049,1.17588707135705,1.25666591329675,0,0.144599356919912,0,0.970601099684455,0.220841518460394,0.484875253135222,0,14.0534782565543,12.9856958224342,0.255457055208591,0,0,0,4.94309110035915,1.83000241127451,0.502617408451458,1.91206752211504,4.60287823194595,3.53239675751252,3.40706652442291,0.305518091550949,0.124406970610093,0.505445516867349,1.47309299120532,0.780722657776222,0.689706313300419,0.540186389416048,1.20563854268572,2.38127747029647,1.2811372028485,1.59292931751539,3.10444044886819,0.431135985865684,0.378212160335639,0.175951124163949,0.43839146485515,0.556094498451196,0.696504333044333,0.205782136407943,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0.540186184383045,0.473489471170421,1.57411385397923,0.771335564436891,0.465067889500816,1.60964040839772,0.817357396570186,0.987359099480883,0.820837320395476,0.810688095458557,0.584799949701329,0.219550115291051,1.07365135008297,3.99550902271842,0.514523061896422,0.991256348951394,0.528901133327089,1.49301775374664,0.232236671860439,1.15980715189884,0.605050573870028,0.444756087689741,0.570676878337677,0.474529061544512,0,0.502670417600539,0.596869416123452,0.38992817423824,0,0.432276099749388,0.199141273254367,0.758671603812327,0.685491075658373,2.25415471346161,0.610953983535943,0.969762435838129,1.75339549725796,1.70738650235495,2.21415221969403,1.09899109488962,2.22114895059241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0.670025029767263,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,5.77982123956051,4.21962071731931,0,0,0,0,0,0,0,0,0,0,0,6.74774764485795,0.141940085208269,0.35613120733451,0.81443479676788,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0,0.632073515871632,0,0,2.7235168460303,0.720244376125241,0.129358683782755,0.643011105094777,0.532020700926821,0.713475270408282,1.15184314421485,3.04464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,5.37733375830478,0,0,0.555583582109135,0,0,0,0,0,0,0,0.474503990371703,0.609958401380546,0.756037385752609,0.209088296014469,0.87345025498471,0.809186078308924,0.495920734352016,0,0.388844919875379,2.4853572523477,0,1.04661582230785,0.330916980914195,0.194451188344048,0,0.337912250981556,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0,0,3.3885110557024,4.60325236507177,4.58316410751517,5.32744865265431,3.42541259885321,3.0215755895588,4.72515750162264,3.60256962579376,4.53142408984205,3.10656187051092,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0.222246727801615,0.412070114477788,0,1.01078884705519,0.25347929989024,0.377252682772152,0.37456602987953,0.448176066834085,0.631790158511746,0,0.463537303779422,0.192909220463705,0.824171801606613,1.03039244094078,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.658765662907314,0.846146078916765,0.365855945745545,0.526139422875686,0.679020569229309,0.561142271657738,0.711810108745045,0.394017929502254,0,0.154936841185966,0.771626443924566,0.499621155875892,0.935726433781634,0.644613162144895,0.765153328275374,1.32354851471709,0.231867835620421
|phase1_expression=1.12104192973356,0.348975407639361,0,0.60492842261366,0.500895729946347,0.503637815735669,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,3.42781181284564,3.53389665522582,0,0.0958454710182364,0,2.20231761998777,5.2351808614927,3.5329502648936,0.659431438650969,0.640413505216868,0,6.14202597803038,1.12552522006336,1.06958773443767,5.00868595305235,2.84743361598206,1.4911955666024,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0,0,0,0.22836775943812,0,1.48442139064825,0.346970653532272,1.21786191324856,1.15307748628029,0.60289056221049,1.17588707135705,1.25666591329675,0,0.144599356919912,0,0.970601099684455,0.220841518460394,0.484875253135222,0,14.0534782565543,12.9856958224342,0.255457055208591,0,0,0,4.94309110035915,1.83000241127451,0.502617408451458,1.91206752211504,4.60287823194595,3.53239675751252,3.40706652442291,0.305518091550949,0.124406970610093,0.505445516867349,1.47309299120532,0.780722657776222,0.689706313300419,0.540186389416048,1.20563854268572,2.38127747029647,1.2811372028485,1.59292931751539,3.10444044886819,0.431135985865684,0.378212160335639,0.175951124163949,0.43839146485515,0.556094498451196,0.696504333044333,0.205782136407943,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0.540186184383045,0.473489471170421,1.57411385397923,0.771335564436891,0.465067889500816,1.60964040839772,0.817357396570186,0.987359099480883,0.820837320395476,0.810688095458557,0.584799949701329,0.219550115291051,1.07365135008297,3.99550902271842,0.514523061896422,0.991256348951394,0.528901133327089,1.49301775374664,0.232236671860439,1.15980715189884,0.605050573870028,0.444756087689741,0.570676878337677,0.474529061544512,0,0.502670417600539,0.596869416123452,0.38992817423824,0,0.432276099749388,0.199141273254367,0.758671603812327,0.685491075658373,2.25415471346161,0.610953983535943,0.969762435838129,1.75339549725796,1.70738650235495,2.21415221969403,1.09899109488962,2.22114895059241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0.670025029767263,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,5.77982123956051,4.21962071731931,0,0,0,0,0,0,0,0,0,0,0,6.74774764485795,0.141940085208269,0.35613120733451,0.81443479676788,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0,0.632073515871632,0,0,2.7235168460303,0.720244376125241,0.129358683782755,0.643011105094777,0.532020700926821,0.713475270408282,1.15184314421485,3.04464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,5.37733375830478,0,0,0.555583582109135,0,0,0,0,0,0,0,0.474503990371703,0.609958401380546,0.756037385752609,0.209088296014469,0.87345025498471,0.809186078308924,0.495920734352016,0,0.388844919875379,2.4853572523477,0,1.04661582230785,0.330916980914195,0.194451188344048,0,0.337912250981556,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0,0,3.3885110557024,4.60325236507177,4.58316410751517,5.32744865265431,3.42541259885321,3.0215755895588,4.72515750162264,3.60256962579376,4.53142408984205,3.10656187051092,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0.222246727801615,0.412070114477788,0,1.01078884705519,0.25347929989024,0.377252682772152,0.37456602987953,0.448176066834085,0.631790158511746,0,0.463537303779422,0.192909220463705,0.824171801606613,1.03039244094078,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.658765662907314,0.846146078916765,0.365855945745545,0.526139422875686,0.679020569229309,0.561142271657738,0.711810108745045,0.394017929502254,0,0.154936841185966,0.771626443924566,0.499621155875892,0.935726433781634,0.644613162144895,0.765153328275374,1.32354851471709,0.231867835620421
|short_description=p2@Fgf9
|short_description=p2@Fgf9
}}
}}

Latest revision as of 04:39, 26 September 2015

Short description:p2@Fgf9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Fgf9_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: -380bp_to_ENSMUST00000022545, NM_013518, uc007udx.2_5end
EntrezGene:Fgf9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Fgf9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I212.99
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.94
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.69e-0723
neuroblast (sensu Vertebrata)2.69e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.50e-2454
neurectoderm3.63e-2464
neural plate3.63e-2464
presumptive neural plate3.63e-2464
structure with developmental contribution from neural crest3.93e-2492
ectoderm-derived structure9.16e-2395
ectoderm9.16e-2395
presumptive ectoderm9.16e-2395
ecto-epithelium2.65e-2273
neural tube4.88e-2252
neural rod4.88e-2252
future spinal cord4.88e-2252
neural keel4.88e-2252
central nervous system1.80e-2173
nervous system1.38e-2075
brain8.03e-1747
future brain8.03e-1747
pre-chordal neural plate9.33e-1649
regional part of brain1.16e-1546
occipital lobe1.83e-1410
visual cortex1.83e-1410
neocortex1.83e-1410
gray matter4.09e-1434
anterior neural tube2.77e-1240
posterior neural tube7.56e-1212
chordal neural plate7.56e-1212
regional part of forebrain2.85e-1139
forebrain2.85e-1139
future forebrain2.85e-1139
brain grey matter2.53e-0929
regional part of telencephalon2.53e-0929
telencephalon2.53e-0929
regional part of cerebral cortex4.06e-0917
spinal cord6.32e-096
dorsal region element6.32e-096
dorsum6.32e-096
cerebral cortex3.80e-0821
cerebral hemisphere3.80e-0821
pallium3.80e-0821
anatomical conduit1.78e-07122
regional part of spinal cord1.80e-075
gray matter of spinal cord1.80e-075
cavitated compound organ4.05e-0721
tube8.87e-07114
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr14:58691117..58691142,%2B&oldid=4233635"