FFCP PHASE1:Mm9::chr10:89083964..89083982,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216227 | |EntrezGene=216227 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=92 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BFU8 | |UniProt=Q8BFU8 | ||
|association_with_transcript=11bp_to_NM_182959,uc007gsk.2_5end | |association_with_transcript=11bp_to_NM_182959,uc007gsk.2_5end | ||
|cluster_id=chr10:89083964..89083982,- | |||
|description=CAGE_peak_1_at_Slc17a8_5end | |description=CAGE_peak_1_at_Slc17a8_5end | ||
|id=chr10:89083964..89083982,- | |id=chr10:89083964..89083982,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.48e-08,44;CL:0000133,2.48e-08,44;CL:0002319,2.45e-07,43;CL:0000117,4.79e-07,23;CL:0000337,4.79e-07,23;CL:0000217,6.26e-07,2;CL:0000328,6.26e-07,2;CL:0002573,6.26e-07,2;CL:0002376,6.26e-07,2;CL:0000218,6.26e-07,2;CL:0000692,6.26e-07,2;CL:0002377,6.26e-07,2;CL:0002375,6.26e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!4.32e-14!49;UBERON:0000033!1.31e-13!63;UBERON:0000073!1.76e-13!75;UBERON:0001016!1.76e-13!75;UBERON:0004121!1.10e-12!102;UBERON:0000924!1.10e-12!102;UBERON:0006601!1.10e-12!102;UBERON:0001017!4.52e-12!73;UBERON:0005743!4.52e-12!73;UBERON:0002346!9.64e-12!71;UBERON:0003075!9.64e-12!71;UBERON:0007284!9.64e-12!71;UBERON:0001049!3.97e-11!52;UBERON:0005068!3.97e-11!52;UBERON:0006241!3.97e-11!52;UBERON:0007135!3.97e-11!52;UBERON:0007811!9.13e-10!86;UBERON:0003080!1.16e-09!40;UBERON:0002780!1.71e-09!39;UBERON:0001890!1.71e-09!39;UBERON:0006240!1.71e-09!39;UBERON:0002616!2.06e-09!49;UBERON:0000955!5.26e-09!50;UBERON:0006238!5.26e-09!50;UBERON:0001894!3.19e-08!10;UBERON:0006222!3.19e-08!10;UBERON:0000153!4.55e-08!94;UBERON:0000007!8.22e-07!8;UBERON:0003296!8.22e-07!8;UBERON:0010133!8.22e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.70e-16,75;UBERON:0004121,4.80e-14,95;UBERON:0000924,4.80e-14,95;UBERON:0006601,4.80e-14,95;UBERON:0001017,1.96e-13,73;UBERON:0000073,7.72e-13,54;UBERON:0001049,5.17e-12,52;UBERON:0005068,5.17e-12,52;UBERON:0006241,5.17e-12,52;UBERON:0007135,5.17e-12,52;UBERON:0010371,7.35e-11,73;UBERON:0002346,2.97e-10,64;UBERON:0003075,2.97e-10,64;UBERON:0007284,2.97e-10,64;UBERON:0002780,5.83e-10,39;UBERON:0001890,5.83e-10,39;UBERON:0006240,5.83e-10,39;UBERON:0003080,1.23e-09,40;UBERON:0002616,2.17e-09,46;UBERON:0000955,4.03e-09,47;UBERON:0006238,4.03e-09,47;UBERON:0003056,1.44e-08,49;UBERON:0002020,3.50e-08,34;UBERON:0010314,1.19e-07,92 | |||
|phase1_expression=3.68342348341026,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88652807281682,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37976916763116,0,0,0,0,0.257259436035947,0,0,1.01158230429799,1.5869729378161,0.633831403506179,2.71075625655306,0.889294796111139,0,0,0,0.299600110518405,0,0,0,0,0.856952953211411,2.20868540951614,0,0.0958454710182364,0,0,0.255374676170375,1.0752457327937,0,0.182975287204819,1.04182674111352,3.35019598801657,0,1.83357897332172,1.47314292736834,1.42371680799103,0,17.7199292399651,13.376166138901,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,1.37250180845588,0.376963056338593,0.695297280769106,1.27857728665165,2.90903262383384,0.648965052271031,0.203678727700633,0.248813941220186,0,0.420883711772948,0.910843100738926,0.229902104433473,0.540186389416048,0.60281927134286,0.680364991513279,0.384341160854549,0.655912071918102,2.06962696591213,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758671603812327,1.02823661348756,5.63538678365402,2.24016460629846,1.55161989734101,0.911765658574141,1.20149420536089,0.147610147979602,0,0,0,0.166845105716094,0,0.449724224769707,0,0,0,0,0,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,2.57865710502847,0,0,0,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0.534196811001766,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.540183282093931,0.258717367565509,0.857348140126369,5.14286677562593,3.38900753443934,4.44282355625727,0.913394847343798,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.405450430580328,1.1298205288131,0.51968329191118,0.179026695667481,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0,0,2.25900737046827,0.920650473014354,2.29158205375759,2.57779773515531,0,0.755393897389701,0,0,1.35942722695261,0.51776031175182,0.207574695168353,0.399024873401031,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.377252682772152,0.280924522409647,0.0640251524048693,0.402048282689293,0,0.115884325944855,0.38581844092741,0,0,0,0.70990322463735,0,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,0.789209134313529,0.135804113845862,0,0.593175090620871,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0.429742108096597,0,0.441182838239031,0 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|phase1_expression=3.68342348341026,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88652807281682,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37976916763116,0,0,0,0,0.257259436035947,0,0,1.01158230429799,1.5869729378161,0.633831403506179,2.71075625655306,0.889294796111139,0,0,0,0.299600110518405,0,0,0,0,0.856952953211411,2.20868540951614,0,0.0958454710182364,0,0,0.255374676170375,1.0752457327937,0,0.182975287204819,1.04182674111352,3.35019598801657,0,1.83357897332172,1.47314292736834,1.42371680799103,0,17.7199292399651,13.376166138901,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,1.37250180845588,0.376963056338593,0.695297280769106,1.27857728665165,2.90903262383384,0.648965052271031,0.203678727700633,0.248813941220186,0,0.420883711772948,0.910843100738926,0.229902104433473,0.540186389416048,0.60281927134286,0.680364991513279,0.384341160854549,0.655912071918102,2.06962696591213,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758671603812327,1.02823661348756,5.63538678365402,2.24016460629846,1.55161989734101,0.911765658574141,1.20149420536089,0.147610147979602,0,0,0,0.166845105716094,0,0.449724224769707,0,0,0,0,0,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,2.57865710502847,0,0,0,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0.534196811001766,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.540183282093931,0.258717367565509,0.857348140126369,5.14286677562593,3.38900753443934,4.44282355625727,0.913394847343798,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.405450430580328,1.1298205288131,0.51968329191118,0.179026695667481,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0,0,2.25900737046827,0.920650473014354,2.29158205375759,2.57779773515531,0,0.755393897389701,0,0,1.35942722695261,0.51776031175182,0.207574695168353,0.399024873401031,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.377252682772152,0.280924522409647,0.0640251524048693,0.402048282689293,0,0.115884325944855,0.38581844092741,0,0,0,0.70990322463735,0,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,0.789209134313529,0.135804113845862,0,0.593175090620871,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0.429742108096597,0,0.441182838239031,0 | ||
|short_description=p1@Slc17a8 | |short_description=p1@Slc17a8 | ||
}} | }} |
Latest revision as of 13:48, 26 September 2015
Short description: | p1@Slc17a8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc17a8_5end |
Coexpression cluster: | MCL_coexpression_mm9:92 |
Association with transcript: | 11bp_to_NM_182959, uc007gsk.2_5end |
EntrezGene: | Slc17a8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.48e-08 | 44 |
neurectodermal cell | 2.48e-08 | 44 |
neural cell | 2.45e-07 | 43 |
CNS neuron (sensu Vertebrata) | 4.79e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.79e-07 | 23 |
insulating cell | 6.26e-07 | 2 |
myelin accumulating cell | 6.26e-07 | 2 |
Schwann cell | 6.26e-07 | 2 |
non-myelinating Schwann cell | 6.26e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 6.26e-07 | 2 |
terminal Schwann cell | 6.26e-07 | 2 |
immature Schwann cell | 6.26e-07 | 2 |
Schwann cell precursor | 6.26e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.70e-16 | 75 |
ectoderm-derived structure | 4.80e-14 | 95 |
ectoderm | 4.80e-14 | 95 |
presumptive ectoderm | 4.80e-14 | 95 |
central nervous system | 1.96e-13 | 73 |
regional part of nervous system | 7.72e-13 | 54 |
neural tube | 5.17e-12 | 52 |
neural rod | 5.17e-12 | 52 |
future spinal cord | 5.17e-12 | 52 |
neural keel | 5.17e-12 | 52 |
ecto-epithelium | 7.35e-11 | 73 |
neurectoderm | 2.97e-10 | 64 |
neural plate | 2.97e-10 | 64 |
presumptive neural plate | 2.97e-10 | 64 |
regional part of forebrain | 5.83e-10 | 39 |
forebrain | 5.83e-10 | 39 |
future forebrain | 5.83e-10 | 39 |
anterior neural tube | 1.23e-09 | 40 |
regional part of brain | 2.17e-09 | 46 |
brain | 4.03e-09 | 47 |
future brain | 4.03e-09 | 47 |
pre-chordal neural plate | 1.44e-08 | 49 |
gray matter | 3.50e-08 | 34 |
structure with developmental contribution from neural crest | 1.19e-07 | 92 |