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FFCP PHASE1:Mm9::chr14:31166654..31166721,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12289
|EntrezGene=12289
|HGNC=
|HGNC=
|MCL_coexpression_id=93
|TSSclassifier=NA
|UniProt=Q99246,E9QPU4,Q6PDD2
|UniProt=Q99246,E9QPU4,Q6PDD2
|association_with_transcript=0bp_to_ENSMUST00000057695,ENSMUST00000112249,NM_001083616,uc007suu.1,uc007suv.1,uc007suw.1_5end
|association_with_transcript=0bp_to_ENSMUST00000057695,ENSMUST00000112249,NM_001083616,uc007suu.1,uc007suv.1,uc007suw.1_5end
|cluster_id=chr14:31166654..31166721,-
|description=CAGE_peak_1_at_Cacna1d_5end
|description=CAGE_peak_1_at_Cacna1d_5end
|id=chr14:31166654..31166721,-
|id=chr14:31166654..31166721,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.07e-21!71;UBERON:0003075!1.07e-21!71;UBERON:0007284!1.07e-21!71;UBERON:0001049!2.48e-20!52;UBERON:0005068!2.48e-20!52;UBERON:0006241!2.48e-20!52;UBERON:0007135!2.48e-20!52;UBERON:0000955!5.80e-20!50;UBERON:0006238!5.80e-20!50;UBERON:0000033!8.49e-20!63;UBERON:0002616!3.18e-19!49;UBERON:0003056!2.98e-17!49;UBERON:0003080!9.18e-16!40;UBERON:0001017!1.63e-15!73;UBERON:0005743!1.63e-15!73;UBERON:0002780!3.72e-15!39;UBERON:0001890!3.72e-15!39;UBERON:0006240!3.72e-15!39;UBERON:0000073!1.30e-14!75;UBERON:0001016!1.30e-14!75;UBERON:0004121!1.99e-14!102;UBERON:0000924!1.99e-14!102;UBERON:0006601!1.99e-14!102;UBERON:0002020!1.32e-13!34;UBERON:0002791!8.71e-12!29;UBERON:0003528!8.71e-12!29;UBERON:0001893!8.71e-12!29;UBERON:0000468!1.26e-09!333;UBERON:0000956!9.77e-09!21;UBERON:0001869!9.77e-09!21;UBERON:0000203!9.77e-09!21;UBERON:0002619!1.60e-08!17;UBERON:0000025!2.00e-08!114;UBERON:0002021!7.41e-08!10;UBERON:0000411!7.41e-08!10;UBERON:0001950!7.41e-08!10;UBERON:0004111!9.14e-08!122;UBERON:0000922!1.15e-07!328;UBERON:0007811!1.27e-07!86;UBERON:0000153!7.50e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.36e-22,54;UBERON:0001049,2.69e-21,52;UBERON:0005068,2.69e-21,52;UBERON:0006241,2.69e-21,52;UBERON:0007135,2.69e-21,52;UBERON:0002346,1.22e-20,64;UBERON:0003075,1.22e-20,64;UBERON:0007284,1.22e-20,64;UBERON:0000955,3.85e-19,47;UBERON:0006238,3.85e-19,47;UBERON:0002616,2.56e-18,46;UBERON:0003056,6.51e-18,49;UBERON:0003080,1.71e-16,40;UBERON:0002780,8.44e-16,39;UBERON:0001890,8.44e-16,39;UBERON:0006240,8.44e-16,39;UBERON:0001017,2.89e-15,73;UBERON:0010371,3.78e-15,73;UBERON:0002020,4.07e-15,34;UBERON:0001016,2.99e-14,75;UBERON:0003528,5.48e-13,29;UBERON:0002791,5.48e-13,29;UBERON:0001893,5.48e-13,29;UBERON:0010314,1.30e-11,92;UBERON:0004121,1.86e-11,95;UBERON:0000924,1.86e-11,95;UBERON:0006601,1.86e-11,95;UBERON:0002619,1.01e-09,17;UBERON:0000956,1.99e-09,21;UBERON:0001869,1.99e-09,21;UBERON:0000203,1.99e-09,21;UBERON:0002021,6.04e-09,10;UBERON:0000411,6.04e-09,10;UBERON:0001950,6.04e-09,10;UBERON:0000025,3.60e-08,114;UBERON:0002048,5.86e-07,14;UBERON:0000117,5.86e-07,14;UBERON:0000171,5.86e-07,14;UBERON:0000170,5.86e-07,14;UBERON:0005597,5.86e-07,14;UBERON:0000118,5.86e-07,14
|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.157731082679119,0.411343300817216,0.42438965179803,5.27268398936633,0.0992909512008853,0,0.319984845586813,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,1.09843091367236,2.52758868796568,0.699932108126813,0,0.335565212115473,0,0,0,0.286533439938757,0,3.03474691289397,2.64495489636016,0.633831403506179,0,0,1.7997994345628,0,2.1314403448383,1.49800055259202,0,2.17748185847803,1.08004750665353,0.841299845405528,2.85650984403804,6.84692476950002,1.83736198822431,1.24599112323707,1.83843757322004,4.40463523997555,6.63974158042976,5.83704826373725,2.50583946687368,1.73826522844578,3.64639359389732,5.30447698102624,10.1297269805702,5.50073691996516,2.94628585473668,4.27115042397309,3.91438836233131,0.227178579999552,0.226714680320357,0.289864488701678,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,0.563373679106722,0,0,0,0,0,0,0.5709193985953,0.776813650941515,4.89859058913922,1.21439728736295,2.43572382649713,2.07553947530453,2.41156224884196,3.41007250693544,1.38233250462643,0,1.01219549843938,0,0.323533699894818,0.441683036920787,0,1.86391761218122,14.6390398505774,20.1068838540917,0,0,0,0,10.4853447583376,12.3525162761029,4.14659361972453,11.4724051326902,13.0414883238469,7.48036960414416,11.6813709408785,3.05518091550949,1.7416975885413,2.27450482590307,4.20883711772948,2.21204753036596,0.689706313300419,1.44049703844279,1.35634336052144,4.08218994907967,3.20284300712124,1.68663104207512,7.50239775143145,0,0.567318240503458,0.351902248327898,0.219195732427575,1.66828349535359,1.0447564995665,1.64625709126355,1.59227413454795,0,0,0,0.414251545071004,0.703578179943289,0.180062061461015,0.710234206755631,0.983821158737019,0.308534225774757,0.697601834251224,0.804820204198858,0.116765342367169,0.822799249567402,0.985004784474571,0.729619285912702,0.146199987425332,0.658650345873152,0.671032093801859,10.5144974282064,4.93942139420565,0,0.528901133327089,1.06644125267617,0.696710015581316,1.15980715189884,1.00841762311671,0.667134131534611,0.760902504450237,0,0.823494773620054,1.50801125280162,1.59165177632921,1.55971269695296,0.898819408654221,1.08069024937347,1.39398891278057,0.569003702859245,0.913988100877831,3.38123207019241,0.814605311381257,1.35766741017338,2.24434623649019,2.46622494784603,3.83786384746966,1.56998727841375,1.48076596706161,0,0,0.589676985339609,0,0,0,0.50925170356284,0.287696137450811,0,0,0,0.744281895337007,0,0,0.179397413521912,0.482443521363367,4.43407656399851,0.568474235311454,2.28150967018836,3.90413697282933,3.28566347603903,6.70025029767263,5.47500374037832,9.36641509717434,8.35466263762812,8.858587585951,5.10255259703959,5.40748938561935,5.87128938344045,9.25753974921674,1.50791283939272,0,0,0.551873492609465,7.38532713943843,7.2671245687166,0,0,0.631016438832513,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,39.2012006034605,3.40656204499845,0.712262414669021,1.79175655288934,3.13443233647817,7.96470830039777,1.69946445308487,1.51161778482376,4.14931175462976,4.13422650033082,5.53383266299069,4.13485269069154,11.2695456138027,5.34746067577082,6.0046984007805,7.37930260024991,4.12542172992747,25.5329704315341,0.900305470156551,1.16422815404479,0.857348140126369,6.20690817747958,8.02659679209317,11.0247843803421,8.82948352432338,0,0,0.661585194164886,0.49465875882444,0.645857706783622,0.422190474497091,0.358117032009409,0.164140899745061,2.04036585640896,8.34413859047294,0.512612642393558,0.619160603889667,0.740778109478847,0,0,0.228778173206523,0,0,0,1.90934123603023,1.58167996790568,2.23651413839534,1.94409613479242,0.836353184057875,1.09181281873089,3.64133735239016,2.14898984885873,0.785267825952089,1.29614973291793,0.621339313086926,0.56369293868419,0.897099276263873,0.66183396182839,0.972255941720238,1.29159823477731,1.520605129417,1.76035857968631,3.77592716047455,1.8874681996628,0.724752362478018,1.15212002503146,0.316011120628178,0.608175645870493,0.205421914329655,0,0,0.198681354781265,0,0.295379054349154,0.100966449948148,0.457240839929999,0.302478555410522,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.965947970160952,1.31377732815827,1.46521299413812,0.643105137237198,1.00314420807073,11.8597886949584,13.8097570952153,13.1765968091061,11.8578695817144,13.0165678756422,17.3740596399631,8.10027000278167,13.0593148935024,10.4222754066367,15.5328093525546,0,0.798049746802062,0.682934423016537,1.70174701947806,1.04806581313991,1.2869045591501,1.33348036680969,1.44224540067226,1.28367683836726,1.76888048234658,1.77435509923168,3.01802146217722,2.43467919421694,1.85672941974121,2.1825478203133,0.476293691283074,1.73826488917283,1.54327376370964,0.824171801606613,1.47198920134397,1.37147700954166,1.24233064311536,0.953744759789284,1.45346416632329,1.50575008664529,1.77690676572521,0.914639864363863,1.841487980064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|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.157731082679119,0.411343300817216,0.42438965179803,5.27268398936633,0.0992909512008853,0,0.319984845586813,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,1.09843091367236,2.52758868796568,0.699932108126813,0,0.335565212115473,0,0,0,0.286533439938757,0,3.03474691289397,2.64495489636016,0.633831403506179,0,0,1.7997994345628,0,2.1314403448383,1.49800055259202,0,2.17748185847803,1.08004750665353,0.841299845405528,2.85650984403804,6.84692476950002,1.83736198822431,1.24599112323707,1.83843757322004,4.40463523997555,6.63974158042976,5.83704826373725,2.50583946687368,1.73826522844578,3.64639359389732,5.30447698102624,10.1297269805702,5.50073691996516,2.94628585473668,4.27115042397309,3.91438836233131,0.227178579999552,0.226714680320357,0.289864488701678,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,0.563373679106722,0,0,0,0,0,0,0.5709193985953,0.776813650941515,4.89859058913922,1.21439728736295,2.43572382649713,2.07553947530453,2.41156224884196,3.41007250693544,1.38233250462643,0,1.01219549843938,0,0.323533699894818,0.441683036920787,0,1.86391761218122,14.6390398505774,20.1068838540917,0,0,0,0,10.4853447583376,12.3525162761029,4.14659361972453,11.4724051326902,13.0414883238469,7.48036960414416,11.6813709408785,3.05518091550949,1.7416975885413,2.27450482590307,4.20883711772948,2.21204753036596,0.689706313300419,1.44049703844279,1.35634336052144,4.08218994907967,3.20284300712124,1.68663104207512,7.50239775143145,0,0.567318240503458,0.351902248327898,0.219195732427575,1.66828349535359,1.0447564995665,1.64625709126355,1.59227413454795,0,0,0,0.414251545071004,0.703578179943289,0.180062061461015,0.710234206755631,0.983821158737019,0.308534225774757,0.697601834251224,0.804820204198858,0.116765342367169,0.822799249567402,0.985004784474571,0.729619285912702,0.146199987425332,0.658650345873152,0.671032093801859,10.5144974282064,4.93942139420565,0,0.528901133327089,1.06644125267617,0.696710015581316,1.15980715189884,1.00841762311671,0.667134131534611,0.760902504450237,0,0.823494773620054,1.50801125280162,1.59165177632921,1.55971269695296,0.898819408654221,1.08069024937347,1.39398891278057,0.569003702859245,0.913988100877831,3.38123207019241,0.814605311381257,1.35766741017338,2.24434623649019,2.46622494784603,3.83786384746966,1.56998727841375,1.48076596706161,0,0,0.589676985339609,0,0,0,0.50925170356284,0.287696137450811,0,0,0,0.744281895337007,0,0,0.179397413521912,0.482443521363367,4.43407656399851,0.568474235311454,2.28150967018836,3.90413697282933,3.28566347603903,6.70025029767263,5.47500374037832,9.36641509717434,8.35466263762812,8.858587585951,5.10255259703959,5.40748938561935,5.87128938344045,9.25753974921674,1.50791283939272,0,0,0.551873492609465,7.38532713943843,7.2671245687166,0,0,0.631016438832513,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,39.2012006034605,3.40656204499845,0.712262414669021,1.79175655288934,3.13443233647817,7.96470830039777,1.69946445308487,1.51161778482376,4.14931175462976,4.13422650033082,5.53383266299069,4.13485269069154,11.2695456138027,5.34746067577082,6.0046984007805,7.37930260024991,4.12542172992747,25.5329704315341,0.900305470156551,1.16422815404479,0.857348140126369,6.20690817747958,8.02659679209317,11.0247843803421,8.82948352432338,0,0,0.661585194164886,0.49465875882444,0.645857706783622,0.422190474497091,0.358117032009409,0.164140899745061,2.04036585640896,8.34413859047294,0.512612642393558,0.619160603889667,0.740778109478847,0,0,0.228778173206523,0,0,0,1.90934123603023,1.58167996790568,2.23651413839534,1.94409613479242,0.836353184057875,1.09181281873089,3.64133735239016,2.14898984885873,0.785267825952089,1.29614973291793,0.621339313086926,0.56369293868419,0.897099276263873,0.66183396182839,0.972255941720238,1.29159823477731,1.520605129417,1.76035857968631,3.77592716047455,1.8874681996628,0.724752362478018,1.15212002503146,0.316011120628178,0.608175645870493,0.205421914329655,0,0,0.198681354781265,0,0.295379054349154,0.100966449948148,0.457240839929999,0.302478555410522,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.965947970160952,1.31377732815827,1.46521299413812,0.643105137237198,1.00314420807073,11.8597886949584,13.8097570952153,13.1765968091061,11.8578695817144,13.0165678756422,17.3740596399631,8.10027000278167,13.0593148935024,10.4222754066367,15.5328093525546,0,0.798049746802062,0.682934423016537,1.70174701947806,1.04806581313991,1.2869045591501,1.33348036680969,1.44224540067226,1.28367683836726,1.76888048234658,1.77435509923168,3.01802146217722,2.43467919421694,1.85672941974121,2.1825478203133,0.476293691283074,1.73826488917283,1.54327376370964,0.824171801606613,1.47198920134397,1.37147700954166,1.24233064311536,0.953744759789284,1.45346416632329,1.50575008664529,1.77690676572521,0.914639864363863,1.841487980064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|short_description=p1@Cacna1d
|short_description=p1@Cacna1d
}}
}}

Latest revision as of 20:45, 25 September 2015

Short description:p1@Cacna1d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cacna1d_5end
Coexpression cluster:MCL_coexpression_mm9:93
Association with transcript: 0bp_to_ENSMUST00000057695, ENSMUST00000112249, NM_001083616, uc007suu.1, uc007suv.1, uc007suw.1_5end
EntrezGene:Cacna1d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cacna1d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B214.64
cerebellum, neonate N30.CNhs11135.1395-42I220.11
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.49
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F14.15
cortex, adult.CNhs10473.12-14D511.47
cortex, neonate N30.CNhs11107.1392-42F213.04
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B211.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C64.08
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A27.50
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G14.94
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D52.47
kidney, neonate N20.CNhs11113.832-19I13.84
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A66.70
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C69.37
lung, neonate N06.CNhs11212.683-20E58.35
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E65.10
lung, neonate N20.CNhs11109.822-18A45.41
lung, neonate N25.CNhs11119.1359-25C75.87
lung, neonate N30.CNhs11133.1394-42H29.26
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C27.39
medulla oblongata, neonate N30.CNhs11200.1396-42A37.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I939.20
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E54.15
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D711.27
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B66.00
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G825.53
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B96.21
pituitary gland, embryo E16.CNhs11036.449-43F68.03
pituitary gland, embryo E17.CNhs11039.1265-44F511.02
pituitary gland, neonate N00.CNhs11190.1308-22E98.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C98.34
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I43.78
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.36e-2254
neural tube2.69e-2152
neural rod2.69e-2152
future spinal cord2.69e-2152
neural keel2.69e-2152
neurectoderm1.22e-2064
neural plate1.22e-2064
presumptive neural plate1.22e-2064
brain3.85e-1947
future brain3.85e-1947
regional part of brain2.56e-1846
pre-chordal neural plate6.51e-1849
anterior neural tube1.71e-1640
regional part of forebrain8.44e-1639
forebrain8.44e-1639
future forebrain8.44e-1639
central nervous system2.89e-1573
ecto-epithelium3.78e-1573
gray matter4.07e-1534
nervous system2.99e-1475
brain grey matter5.48e-1329
regional part of telencephalon5.48e-1329
telencephalon5.48e-1329
structure with developmental contribution from neural crest1.30e-1192
ectoderm-derived structure1.86e-1195
ectoderm1.86e-1195
presumptive ectoderm1.86e-1195
regional part of cerebral cortex1.01e-0917
cerebral cortex1.99e-0921
cerebral hemisphere1.99e-0921
pallium1.99e-0921
occipital lobe6.04e-0910
visual cortex6.04e-0910
neocortex6.04e-0910
tube3.60e-08114
lung5.86e-0714
respiratory tube5.86e-0714
respiration organ5.86e-0714
pair of lungs5.86e-0714
lung primordium5.86e-0714
lung bud5.86e-0714
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