EntrezGene:12289

Symbol:	Cacna1d
Description:	calcium channel, voltage-dependent, L type, alpha 1D subunit
Synonyms:	8430418G19Rik, C79217, Cacnl1a2, Cchl1a, Cchl1a2, D-LTCC
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:12289 MGI:88293 Ensembl:ENSMUSG00000015968
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr14:31166654..31166721,-	p1@Cacna1d
Mm9::chr14:31166760..31166789,-	p3@Cacna1d
Mm9::chr14:31304637..31304644,-	p4@Cacna1d
Mm9::chr14:31304674..31304692,-	p6@Cacna1d
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Cacna1d	p3@Cacna1d	p4@Cacna1d

Sample	p1@Cacna1d	p3@Cacna1d	p4@Cacna1d
olfactory brain, adult.CNhs10489.18-22I9	39.20	9.64	0.00
pituitary gland, adult.CNhs10493.21-1G8	25.53	2.04	0.00
cerebellum, neonate N30.CNhs11135.1395-42I2	20.11	4.61	0.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	17.37	3.02	0.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	15.53	4.14	0.00
cerebellum, adult.CNhs10494.15-8B2	14.64	2.93	0.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	13.81	3.68	0.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	13.18	3.44	0.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	13.06	2.70	0.00
cortex, neonate N30.CNhs11107.1392-42F2	13.04	4.35	0.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	13.02	2.06	0.00
corpus striatum, adult.CNhs10487.19-21D8	12.35	3.66	0.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	11.86	4.52	0.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	11.86	2.23	0.00
diencephalon, neonate N30.CNhs11201.1388-42B2	11.68	3.41	0.00
cortex, adult.CNhs10473.12-14D5	11.47	2.96	0.00
pancreas, neonate N01.CNhs11138.1531-43D7	11.27	0.36	0.00
pituitary gland, embryo E17.CNhs11039.1265-44F5	11.02	1.81	0.00
hippocampus, adult.CNhs10478.13-16E8	10.51	4.21	0.00
corpora quadrigemina, adult.CNhs10501.16-22A4	10.49	1.80	0.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	10.42	2.27	0.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	10.13	0.00	0.00
lung, neonate N00.CNhs11224.640-42C6	9.37	5.46	0.39
lung, neonate N30.CNhs11133.1394-42H2	9.26	4.77	0.00
lung, neonate N07.CNhs11111.715-19A3	8.86	8.64	0.00
pituitary gland, neonate N00.CNhs11190.1308-22E9	8.83	2.44	0.00
lung, neonate N06.CNhs11212.683-20E5	8.35	7.57	0.16
spinal cord, adult.CNhs10505.24-13C9	8.34	0.74	0.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	8.10	5.40	0.00
pituitary gland, embryo E16.CNhs11036.449-43F6	8.03	1.07	0.00
pancreas, adult.CNhs10486.34-16E4	7.96	1.33	0.00
eyeball, neonate N16.CNhs11188.777-19A2	7.50	1.03	0.00
diencephalon, adult.CNhs10482.20-12F2	7.48	2.08	0.00
medulla oblongata, adult.CNhs10477.17-12C2	7.39	1.44	0.00
pancreas, neonate N25.CNhs11094.1555-45E2	7.38	2.11	0.00
medulla oblongata, neonate N30.CNhs11200.1396-42A3	7.27	0.94	0.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	6.85	0.66	0.00
lung, embryo E17.CNhs10605.480-44A6	6.70	5.86	0.67
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	6.64	0.77	0.00
pituitary gland, embryo E15.CNhs10592.427-16B9	6.21	2.13	0.00
pancreas, neonate N16.CNhs11136.787-43B6	6.00	2.53	0.00
lung, neonate N25.CNhs11119.1359-25C7	5.87	4.49	0.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	5.84	0.61	0.00
pancreas, embryo E18.CNhs10580.1535-43I7	5.53	0.92	0.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	5.50	0.61	0.00
lung, embryo E18.CNhs10583.1287-20I6	5.48	7.14	0.48
lung, neonate N20.CNhs11109.822-18A4	5.41	3.93	0.00
pancreas, neonate N02.CNhs11139.1539-43D8	5.35	1.07	0.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	5.30	1.95	0.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	5.27	0.77	0.00
lung, neonate N10.CNhs11219.750-23E6	5.10	6.70	0.00
hippocampus, neonate N00.CNhs11228.627-43G1	4.94	1.96	0.00
adrenal gland, adult.CNhs10508.49-24D7	4.90	1.78	0.00
lung, adult.CNhs10474.28-22B1	4.43	1.48	0.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	4.40	0.00	0.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	4.27	2.28	0.00
eyeball, adult.CNhs10484.31-12G4	4.21	0.84	0.00
corpus striatum, neonate N00.CNhs11226.630-43F1	4.15	2.51	0.00
pancreas, embryo E16.CNhs11003.460-26E5	4.15	0.75	0.00
pancreas, embryo E17.CNhs10599.1558-45G3	4.13	0.59	0.00
pancreas, neonate N00.CNhs11105.645-26G9	4.13	1.55	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	4.13	1.03	0.00
eyeball, neonate N00.CNhs11207.633-15C6	4.08	2.18	0.00
whole body, embryo E17.CNhs10517.475-3I5	4.00	2.50	0.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	3.91	2.42	0.00
lung, embryo E15.CNhs11020.432-17C5	3.90	1.36	1.70
kidney, neonate N20.CNhs11113.832-19I1	3.84	0.44	0.00
testis, neonate N07.CNhs11222.726-26I4	3.78	1.43	0.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	3.65	1.04	0.00
stomach, neonate N03.CNhs11193.1340-24B8	3.64	1.21	0.00
adrenal gland, neonate N00.CNhs11191.1311-23C1	3.41	1.41	0.00
ovary, adult.CNhs10507.91-2I7	3.41	1.56	0.28
kidney, embryo E16.CNhs10584.464-22A5	3.38	1.13	0.00
lung, embryo E16.CNhs10998.458-17B6	3.29	2.11	0.70
eyeball, neonate N01.CNhs11140.1532-43E7	3.20	1.41	0.00
oviduct, adult pregnant day01.CNhs10500.988-6G6	3.13	2.31	0.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	3.06	2.04	0.31
Mouse Granule cells, donor1.CNhs12131.11713-123C3	3.03	2.23	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	3.02	1.89	0.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	2.95	0.88	0.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	2.86	1.71	0.00
Mouse Granule cells, donor2.CNhs12357.11731-123E3	2.64	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	2.63	1.70	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	2.58	1.36	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	2.56	1.48	0.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	2.53	0.58	0.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	2.51	1.32	0.00
whole body, embryo E17.5.CNhs10513.490-9F9	2.51	1.35	0.00
kidney, neonate N10.CNhs11206.758-6D5	2.47	1.26	0.00
adrenal gland, embryo E16.CNhs11004.1254-43D6	2.44	0.30	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	2.43	1.69	0.19
adrenal gland, embryo E18.CNhs11026.1262-18F5	2.41	1.21	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	2.37	0.95	0.24
lung, embryo E14.CNhs10604.404-26F8	2.28	1.96	1.14
epididymis, adult.CNhs10490.58-23B2	2.27	1.01	0.00
kidney, neonate N00.CNhs11214.646-21G7	2.24	1.05	0.07
stomach, embryo E15.CNhs10603.1252-16G8	2.24	1.02	0.41
eyeball, embryo E12.CNhs11016.345-16C6	2.21	0.52	0.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	2.18	1.56	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	2.18	1.09	0.17
stomach, neonate N07.CNhs11210.718-18A9	2.15	1.16	0.00
whole body, neonate N00.CNhs10525.657-19C2	2.15	1.72	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	2.13	0.00	0.00
adrenal gland, embryo E17.CNhs11043.1263-45I1	2.08	1.15	0.00
small intestine, neonate N16.CNhs11114.790-21I1	2.04	0.29	0.00
stomach, embryo E16.CNhs11022.459-17D4	1.94	1.19	0.00
stomach, adult.CNhs10503.33-1H6	1.91	0.00	0.00
testis, neonate N10.CNhs11204.763-44D9	1.89	1.36	0.42
whole body, embryo E18.CNhs10516.493-3B3	1.87	1.17	0.00
cecum, adult.CNhs10467.37-13H4	1.86	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	1.86	1.15	0.13
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	1.84	0.37	0.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	1.84	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	1.84	0.79	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	1.80	0.45	0.00
ovary, neonate N00.CNhs11217.1299-22I4	1.79	0.81	1.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	1.78	1.02	0.08
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	1.77	1.01	0.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	1.77	1.27	0.25
testis, neonate N00.CNhs11189.1300-22B7	1.76	0.35	0.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	1.74	1.01	0.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	1.74	0.87	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	1.74	1.39	0.00
pancreas, embryo E14.CNhs11012.405-44F4	1.70	1.46	0.00
whole body, embryo E14.5.CNhs10578.420-27D2	1.70	0.49	0.00
eyeball, neonate N02.CNhs11205.1551-44G8	1.69	2.06	0.00
forelimb, embryo E15.CNhs11007.437-20E7	1.67	0.83	0.00
forelimb, embryo E18.CNhs11008.1520-43B5	1.65	1.44	0.00
gonad, embryo E13.CNhs11044.1564-45I6	1.59	0.40	5.37
intestine, neonate N07.CNhs11095.720-20F2	1.59	0.80	0.00
stomach, embryo E12.CNhs10588.356-43E3	1.58	1.42	0.16
kidney, neonate N25.CNhs11122.1353-25F3	1.57	0.00	0.00
intestine, neonate N10.CNhs11098.755-23A5	1.56	0.58	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	1.54	1.54	0.00
testis, embryo E18.CNhs11027.503-18G5	1.52	0.51	0.17
intestine, neonate N06.CNhs11102.688-20B8	1.51	0.25	0.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	1.51	0.00	0.00
pancreas, embryo E15.CNhs11042.1556-45F2	1.51	0.30	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	1.51	1.60	0.00
Mouse Microglia, donor1.CNhs12629.11718-123C8	1.50	0.60	0.00
kidney, neonate N30.CNhs11203.1385-42H1	1.48	0.37	0.00
uterus, adult.CNhs10509.92-27E5	1.47	0.55	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	1.47	0.74	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	1.45	1.02	0.15
eyeball, embryo E15.CNhs10593.426-16C9	1.44	0.72	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	1.44	1.44	0.21
intestine, neonate N30.CNhs11131.1384-42G1	1.39	0.20	0.00
adrenal gland, neonate N25.CNhs11223.1377-27I3	1.38	0.25	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	1.37	0.69	0.34
eyeball, embryo E17.CNhs11023.1261-18D4	1.36	1.05	0.00
kidney, embryo E18.CNhs11001.1288-20C7	1.36	0.39	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	1.33	0.67	0.00
uterus, adult pregnant day19.CNhs10497.590-15F5	1.31	0.19	0.00
stomach, neonate N30.CNhs11134.1386-42I1	1.30	0.78	0.00
testis, embryo E17.CNhs11029.486-18I5	1.29	0.52	0.00
whole body, embryo E16.CNhs10514.453-14F2	1.29	0.92	0.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	1.28	1.93	0.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	1.25	0.29	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	1.24	1.06	0.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	1.23	1.64	0.00
adrenal gland, embryo E14.CNhs11038.406-44C5	1.21	0.52	0.00
intestine, embryo E15.CNhs10602.976-16D8	1.16	1.16	0.00
pituitary gland, embryo E13.CNhs11009.370-44C7	1.16	0.13	0.00
testis, neonate N30.CNhs11130.1391-42E2	1.15	0.86	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	1.12	1.12	0.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	1.10	0.66	0.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	1.09	0.44	0.00
stomach, embryo E18.CNhs10999.1286-20C6	1.09	0.44	0.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	1.08	0.95	0.00
intestine, neonate N25.CNhs11121.1352-25E3	1.08	0.22	0.00
intestine, embryo E12.CNhs11019.1251-16I5	1.07	0.85	0.00
whole body, embryo E14.CNhs10519.395-14B1	1.05	0.63	0.00
forelimb, embryo E17.CNhs10598.1517-43C4	1.04	0.70	0.00
aorta, adult.CNhs10498.46-23H1	1.01	0.14	0.00
intestine, embryo E16.CNhs10585.463-22H4	1.01	0.81	0.00
vesicular gland, adult.CNhs10491.51-27F8	1.00	0.00	0.00
heart, neonate N10.CNhs11118.749-24G1	0.99	0.49	2.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	0.98	0.28	0.00
heart, embryo E15.CNhs11017.431-16C8	0.98	0.59	10.23
testis, embryo E16.CNhs11033.470-26G5	0.97	0.39	0.19
urinary bladder, adult.CNhs10481.879-12E4	0.97	0.19	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	0.95	1.19	0.72
kidney, embryo E15.CNhs10997.434-16F8	0.91	0.46	0.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	0.91	1.46	0.18
intestine, neonate N20.CNhs11187.827-18D1	0.90	2.70	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	0.90	0.54	0.00
testis, embryo E13.CNhs11031.389-23F5	0.90	0.60	0.45
pituitary gland, embryo E14.CNhs11037.398-44A5	0.86	0.00	0.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	0.84	1.47	0.00
stomach, embryo E17.CNhs11006.1035-18D5	0.84	0.42	0.00
heart, neonate N03.CNhs11221.1349-25I2	0.82	0.16	4.28
intestine, neonate N01.CNhs11192.1322-23E9	0.82	0.99	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	0.82	0.00	0.41
kidney, embryo E17.CNhs11028.483-18I2	0.81	0.81	0.20
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	0.81	0.00	0.00
heart, embryo E18.CNhs11030.1283-20G3	0.80	0.00	5.90
whole body, embryo E12.CNhs10587.857-27C9	0.80	0.40	0.40
stomach, neonate N25.CNhs11104.1355-25E4	0.79	0.26	0.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	0.78	0.78	0.00
accessory axillary lymph node, adult.CNhs10475.1063-29H9	0.78	0.00	0.00
whole body, neonate N01.CNhs10576.659-23C6	0.77	0.19	0.00
intestine, embryo E18.CNhs10526.1289-20F7	0.76	0.57	0.00
liver, neonate N07.CNhs11103.716-20H2	0.74	0.37	0.00
spleen, embryo E18.CNhs11011.1271-21F2	0.74	0.37	0.00
heart, neonate N16.CNhs11209.782-15G1	0.73	0.49	0.89
testis, neonate N20.CNhs11110.839-18H3	0.72	1.69	0.00
heart, embryo E14.CNhs10597.403-26D4	0.71	0.00	15.39
ovary, embryo E18.CNhs11040.505-44H7	0.71	0.53	2.49
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	0.70	0.42	0.00
heart, embryo E12.CNhs11015.353-12F5	0.70	0.23	18.76
heart, embryo E17.CNhs11025.479-18E5	0.70	0.23	7.44
intestine, embryo E13.CNhs11010.381-16D5	0.70	0.70	0.00
whole body, neonate N10.CNhs10518.761-6B4	0.70	0.23	0.00
eyeball, embryo E14.CNhs10521.399-16E2	0.69	0.92	0.00
whole body, embryo E13.CNhs10512.372-23H2	0.68	1.20	0.34
heart, neonate N30.CNhs11202.1390-42D2	0.67	0.27	0.54
intestine, embryo E17.CNhs10582.482-18D3	0.67	0.89	0.00
heart, neonate N25.CNhs11196.1351-25D3	0.66	0.22	1.10
prostate, adult.CNhs10470.859-1F8	0.66	0.44	0.00
testis, embryo E15.CNhs11034.443-27C5	0.66	0.00	0.33
whole body, neonate N06.CNhs10515.692-21D1	0.66	0.44	0.00
skin, neonate N00.CNhs11124.650-25G4	0.65	0.32	0.00
vagina, adult.CNhs10502.89-27D5	0.64	0.43	0.00
Mouse Granule cells, donor3.CNhs12108.11636-122C7	0.63	0.63	0.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	0.63	0.00	0.00
spleen, embryo E16.CNhs11035.461-43C1	0.62	0.62	0.00
submandibular gland, adult.CNhs10469.59-29C1	0.62	0.62	0.00
thymus, embryo E14.CNhs11041.402-44I4	0.61	0.00	0.00
liver, embryo E13.CNhs10524.378-3H6	0.59	0.00	0.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	0.57	0.23	0.00
forelimb, embryo E12.CNhs10600.359-14H2	0.57	0.38	0.00
kidney, embryo E14.CNhs10606.411-4I9	0.57	0.38	0.00
lung, embryo E12.CNhs10522.354-16G2	0.57	0.38	5.87
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	0.56	0.28	0.00
testis, adult.CNhs10504.57-7G5	0.56	0.56	0.00
mammary gland, adult pregnant day19.CNhs10476.588-5H2	0.55	0.00	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	0.54	0.00	0.00
intestine, adult.CNhs10496.178-9A3	0.53	0.26	0.00
liver, embryo E17.CNhs10510.481-18A3	0.51	0.00	0.00
spleen, adult.CNhs10465.25-2G2	0.51	0.34	0.00
skin, adult.CNhs10492.30-1C3	0.49	0.00	0.00
liver, neonate N30.CNhs11106.1382-42D1	0.48	0.48	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	0.48	0.48	0.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	0.46	0.46	0.00
thymus, neonate N07.CNhs11211.713-19D3	0.46	0.38	0.00
tongue, adult.CNhs10499.32-1B4	0.45	0.23	0.00
bone (os femoris), neonate N16.CNhs11225.1525-43A6	0.44	0.22	0.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	0.43	0.22	0.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	0.42	0.00	0.00
skin, neonate N03.CNhs11215.662-22H3	0.42	0.24	0.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	0.41	0.14	0.00
heart, embryo E11.CNhs10586.331-24E9	0.41	0.41	18.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	0.40	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	0.40	0.79	0.00
skin, neonate N06.CNhs11097.693-20I5	0.36	0.12	0.00
forelimb, embryo E13.CNhs10589.384-1E2	0.35	0.53	0.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	0.34	0.00	0.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	0.33	0.00	0.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	0.32	0.00	0.00
bone (os femoris), neonate N02.CNhs11227.1985-43F5	0.32	0.32	0.00
thymus, adult.CNhs10471.38-12B5	0.32	0.00	0.00
heart, embryo E16.CNhs11021.457-17C6	0.31	0.15	9.87
thymus, neonate N03.CNhs11137.2104-43C7	0.30	0.00	0.00
thymus, neonate N10.CNhs11194.748-24E4	0.30	0.20	0.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	0.29	0.00	0.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	0.29	0.00	0.00
liver, embryo E18.CNhs10579.499-43G4	0.29	0.00	0.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	0.29	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	0.28	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	0.24	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	0.23	0.00	0.00
Mouse Schwann, donor1.CNhs12507.11728-123D9	0.23	0.23	0.00
Mouse Schwann, donor2.CNhs12573.11746-123F9	0.23	0.00	0.00
spleen, neonate N25.CNhs11099.1354-25G3	0.23	0.23	0.00
forelimb, embryo E14.CNhs10577.413-26A8	0.22	0.44	0.00
thymus, embryo E15.CNhs11005.430-45I2	0.21	0.10	0.10
thymus, embryo E18.CNhs10595.1273-19G4	0.20	0.00	0.00
heart, embryo E13.CNhs11013.376-3I9	0.18	0.36	11.88
liver, neonate N25.CNhs11198.1368-26H1	0.18	0.00	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	0.16	0.00	0.00
skin, neonate N10.CNhs11108.762-6C4	0.16	0.00	0.00
heart, neonate N20.CNhs11127.821-26I6	0.15	0.44	0.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	0.13	0.00	0.00
heart, neonate N00.CNhs11213.639-21E3	0.12	0.23	3.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	0.10	0.00	0.00
thymus, neonate N06.CNhs11197.681-26C4	0.10	0.00	0.00
thymus, neonate N20.CNhs11186.820-7A2	0.10	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	0.09	0.00	0.00
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	0.00	0.00	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	0.00	0.00	0.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	0.00	0.14	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	0.00	0.00	0.00
GP2+ M cell, pool1.CNhs13228.11845-124H9	0.00	0.00	0.00
GP2+ M cell, pool2.CNhs13231.11846-124I1	0.00	0.00	0.00
GP2+ M cell, pool3.CNhs13240.11847-124I2	0.00	0.00	0.00
Ileum epithelium, pool1.CNhs13199.10252-104B9	0.00	0.00	0.00
Ileum epithelium, pool2.CNhs13232.10253-104C1	0.00	0.00	0.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	0.00	0.20	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	0.00	0.00	0.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	0.00	0.00	0.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	0.00	0.00	0.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	0.00	0.00	0.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	0.00	0.00	0.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	0.00	0.99	0.00
Mouse Microglia, donor2.CNhs12634.11736-123E8	0.00	0.00	0.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	0.00	0.00	0.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	0.00	0.00	0.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	0.00	0.00	0.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	0.00	0.00	0.00
amnion, adult pregnant day17.5.CNhs10488.583-22A8	0.00	0.00	0.00
bone (os femoris), adult.CNhs10483.56-12G2	0.00	0.00	0.00
bone (os femoris), neonate N20.CNhs11195.1350-25C3	0.00	0.48	0.00
colon, adult.CNhs10468.36-18H7	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	0.00	0.00	0.00
forelimb, embryo E11.CNhs10596.335-25E2	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	0.00	0.00	0.00
intestinal mucosa, adult.CNhs10506.860-29I3	0.00	0.00	0.00
intestine, neonate N00.CNhs11126.644-26D1	0.00	0.47	0.00
liver, adult pregnant day01.CNhs10466.508-5B2	0.00	0.00	0.00
liver, embryo E12.CNhs10601.355-15F8	0.00	0.00	0.83
liver, embryo E14.CNhs10594.409-16E1	0.00	0.00	0.00
liver, embryo E15.CNhs10520.433-16D7	0.00	0.00	0.00
liver, embryo E16.CNhs10523.462-17F5	0.00	0.00	0.00
liver, neonate N00.CNhs11117.641-24F4	0.00	0.00	0.00
liver, neonate N03.CNhs11123.1345-25G2	0.00	0.00	0.00
liver, neonate N06.CNhs11101.684-20A8	0.00	0.00	0.00
liver, neonate N10.CNhs11115.751-24B9	0.00	0.00	0.00
liver, neonate N20.CNhs11220.823-25A3	0.00	0.00	0.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	0.00	0.00	0.00
mammary gland, adult lactating day02.CNhs10480.595-22B6	0.00	0.00	0.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	0.00	0.00	0.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	0.00	0.00	0.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	0.00	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	0.00	0.22	0.00
placenta, adult pregnant day10.CNhs10472.539-13I7	0.00	0.23	0.00
placenta, adult pregnant day17.CNhs10464.577-18G3	0.00	0.21	0.21
spleen, neonate N10.CNhs11116.752-24D1	0.00	0.19	0.00
spleen, neonate N20.CNhs11112.824-19H1	0.00	0.14	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	0.00	0.00	0.00
thymus, embryo E16.CNhs11002.456-26C5	0.00	0.00	0.00
thymus, embryo E17.CNhs10581.478-18C1	0.00	0.00	0.00
thymus, neonate N02.CNhs11181.1541-43F8	0.00	0.12	0.00
thymus, neonate N25.CNhs11125.1362-25G7	0.00	0.00	0.00
thymus, neonate N30.CNhs11132.1393-42G2	0.00	0.12	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	0.00	0.00	0.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	0.00	0.00	0.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	0.00	0.00	0.00
whole body, embryo E11.CNhs11014.324-5I8	0.00	0.00	0.21

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p1@Cacna1d
p3@Cacna1d
p4@Cacna1d

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	12289
LocusTag:	-
chromosome:	14
map location:	14 B, 14 8.0 cM, 14 B;;14 8.0 cM
type of gene:	protein-coding
Symbol from nomenclature authority:	Cacna1d
Full name from nomenclature authority:	calcium channel, voltage-dependent, L type, alpha 1D subunit
Nomenclature status:	O
Other designations:	Cav1.3alpha1, alpha 1 E, calcium channel, L type, alpha-1 polypeptide, voltage-dependent L-type calcium channel subunit alpha-1D, voltage-gated calcium channel subunit alpha Cav1.3, Cav1.3alpha1;;alpha 1 E;;calcium channel, L type, alpha-1 polypeptide;;voltage-dependent L-type calcium channel subunit alpha-1D;;voltage-gated calcium channel subunit alpha Cav1.3
Modification date:	15.01.2012