FFCP PHASE1:Mm9::chr10:78996495..78996542,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50784 | |EntrezGene=50784 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DAX2,E9PV78,G3XA61 | |UniProt=Q9DAX2,E9PV78,G3XA61 | ||
|association_with_transcript=0bp_to_ENSMUST00000063879,ENSMUST00000165233,ENSMUST00000166804,NM_015817,uc007fyr.1,uc007fys.1,uc007fyt.1,uc007fyu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000063879,ENSMUST00000165233,ENSMUST00000166804,NM_015817,uc007fyr.1,uc007fys.1,uc007fyt.1,uc007fyu.1_5end | ||
|cluster_id=chr10:78996495..78996542,- | |||
|description=CAGE_peak_1_at_Ppap2c_5end | |description=CAGE_peak_1_at_Ppap2c_5end | ||
|id=chr10:78996495..78996542,- | |id=chr10:78996495..78996542,- | ||
|ontology_enrichment_celltype=CL:0000066!5.74e-11!25;CL:0000223!5.01e-09!20;CL:0002076!9.97e-09!15;CL:0002563!8.65e-07!9;CL:0002251!8.65e-07!9 | |ontology_enrichment_celltype=CL:0000066!5.74e-11!25;CL:0000223!5.01e-09!20;CL:0002076!9.97e-09!15;CL:0002563!8.65e-07!9;CL:0002251!8.65e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.73e-11,25;CL:0000223,5.00e-09,20;CL:0002076,9.95e-09,15;CL:0002563,8.64e-07,9;CL:0002251,8.64e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.28e-18!43;UBERON:0005409!3.17e-16!59;UBERON:0004119!3.83e-13!130;UBERON:0000925!3.83e-13!130;UBERON:0006595!3.83e-13!130;UBERON:0001007!1.82e-12!128;UBERON:0001555!1.82e-12!128;UBERON:0007026!1.82e-12!128;UBERON:0004921!1.75e-11!126;UBERON:0004185!1.75e-11!126;UBERON:0000344!8.68e-11!15;UBERON:0001242!1.66e-09!13;UBERON:0000060!1.66e-09!13;UBERON:0001262!1.66e-09!13;UBERON:0004786!1.66e-09!13;UBERON:0002100!4.89e-07!98;UBERON:0003350!8.65e-07!9;UBERON:0004808!8.65e-07!9;UBERON:0001277!8.65e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.59e-17,31;UBERON:0005409,6.01e-15,47;UBERON:0004119,3.75e-11,118;UBERON:0000925,3.75e-11,118;UBERON:0006595,3.75e-11,118;UBERON:0000344,8.66e-11,15;UBERON:0001007,1.58e-10,116;UBERON:0001555,1.58e-10,116;UBERON:0007026,1.58e-10,116;UBERON:0004921,1.28e-09,114;UBERON:0001242,1.66e-09,13;UBERON:0001262,1.66e-09,13;UBERON:0004786,1.66e-09,13;UBERON:0002100,2.18e-07,90;UBERON:0005177,7.65e-07,79;UBERON:0003350,8.64e-07,9;UBERON:0004808,8.64e-07,9;UBERON:0001277,8.64e-07,9 | |||
|phase1_expression=13.4525031568027,310.588112799031,336.244437908867,241.36644062285,276.494442930384,146.726483650992,131.290304014685,2.06597317506522,2.956563165185,1.87251621057595,1.02730780935303,0.797721589953364,0.856003649656029,0.437102012094987,0.999329285446988,2.22722794128809,2.09868563438444,4.10100814965709,3.56497527374921,2.97072756258621,19.0496969938396,4.56738375524072,1.56719873483361,225.749308561497,264.738310351514,315.253348299146,260.61100767624,241.543251840882,383.277237043506,368.468049709019,332.595765982957,6.35030673459631,9.22597181376855,0,97.0541442364283,102.400541540831,85.9552989864574,0.418531630736908,2.3440060335714,0.523523743973798,0,0.683045484958446,1.45653105909346,65.9699326192025,66.5032668800015,82.2289449684333,34.4252191513137,10.9012578190223,14.7189742432096,20.0262796046512,19.5980990275508,8.62515386189829,4.02678254538567,0.725362142011344,0,31.6429106324215,19.4842739158355,19.0798674142654,5.46254444320914,10.0508286061686,8.87363964908651,38.2894321238119,25.789549087223,42.2952867122258,35.5991890524111,42.628806896766,30.5592112728773,18.8266969607562,2.69592992002042,3.64516033495565,3.15487442027073,11.7116903605559,11.7060326704355,3.30725157880376,2.1086003624012,1.83843757322004,6.60695285996332,5.36286819957788,7.37311359629969,7.38563211289086,6.03818447775904,6.77187381723788,9.77140496504833,11.2552522006336,8.55670187550137,9.1334861496837,7.40332740155335,8.20157561631323,26.3527152799481,19.7997487479778,12.4641730141721,13.7667820317022,70.0370473718983,17.810205324048,29.2399387851451,28.6737207742295,26.2631065646376,78.0570877407504,89.8859575925926,75.6146689452128,33.94326416618,29.5150898052931,22.9324715735981,42.6640021891999,87.2458895275193,83.8621154722576,100.093840112927,47.0437584442527,3.36619248741323,11.2816025689267,18.0424739836781,16.7456013071678,21.6778567420695,15.2229866958149,17.2855399489486,13.3206586809456,61.7987419335935,5.92857363371638,4.42305275974937,3.88240439873782,1.76673214768315,3.87900202508178,115.562891955236,2.04946557908083,2.72280718857492,228.378607356481,5.87094110079009,9.59844369589452,5.46401976414178,7.9389038884556,5.49000723382352,3.5183218591602,2.43354048269187,1.27857728665165,4.77912502486988,5.84068547043927,11.915205570487,8.08645308965605,31.3376220457757,62.7116730541692,8.32770834961304,8.27647575960503,7.20248519221397,8.13806016312861,5.10273743634959,5.38077625196369,6.46541899462129,58.2082584162785,10.5628316537093,10.0226222488944,10.0292140773451,8.98702502953057,9.45360647367033,12.8853301613202,13.5816210029243,6.96619933864726,9.12877143507205,6.43369767786788,10.2298859782413,7.45652781127807,4.69052119962192,7.74266864282364,8.75955521665278,5.1158700254325,5.24508183817086,4.18561100550734,6.43856163359086,4.43708300995244,3.45575684818309,3.94001913789829,1.94565142910054,2.33919979880532,2.19550115291051,0.939444931322602,3.15434922846191,2.46971069710283,252.439950199622,164.752703031388,12.797295032114,13.9342003116263,44.201539233478,56.0680198452892,72.9399983811175,98.3466487001931,173.677636525291,116.277462035152,87.7159878712941,87.5408476981064,88.5136955520805,173.472145870265,141.138146568175,167.676952080177,16.5011073829181,18.7367560679955,21.4144697778853,21.5870407516033,25.2138233317913,33.5249219075723,28.3299686316673,34.3931644792473,33.911725213737,47.2611137820496,45.6537045714209,12.6802280344231,16.5109555895091,14.8408994174003,16.8373900752457,30.1471449690521,33.355986583366,26.4680446454746,31.1299635408068,40.0859663254599,20.1275489138296,36.8419538191818,33.7000686963725,36.6239373023312,31.5739447798565,47.27946509361,12.0089573608293,12.127450353311,12.2223732331519,19.0114496068211,14.3161051455986,12.8979818230198,14.9967493758189,18.5376965464909,11.0344600874334,12.8449519996289,8.92946704481928,12.2897486036803,14.5055384767352,17.9364832641074,22.6186925908908,12.5098307278303,33.4399705652945,55.1873492609465,11.559642479121,13.1277088983268,17.8689090460576,2.01976741763498,8.83423014365519,7.02789739733949,5.60100834105277,8.84184552424442,8.24355094104858,9.6246020468203,11.7395103485719,11.6902343164525,11.0680577825027,0.963963949265421,16.1811697137426,12.2865266530406,11.2392001953967,24.7455184458803,11.9470624505967,24.5208442516531,28.1160907977218,14.7111962209601,20.6711325016541,21.5204603560749,38.7642439752332,21.0849563096953,19.6073558111597,18.0140952023415,23.1920938864997,22.6898195146011,12.9367050186439,8.10274923140896,8.14959707831353,9.00215547132688,6.0295679438373,7.66985915688903,7.56925494769756,11.2652031172402,44.8222962401687,37.4942765428962,34.4024300965741,23.9085066765146,14.2088695492397,14.8369795323263,24.8294475526524,24.7852758615042,142.242648275367,17.2445530869774,2.39219233116994,5.77883230297023,6.11141940320049,3.20226376907975,3.14396723758358,2.0590035588587,7.81900777971734,9.23679585336143,10.2267980615274,70.6456257331184,12.6534397432454,29.0746837991394,41.9060722388589,44.7448953470963,48.9132142791438,41.40335434014,46.7818559405401,79.312050421161,135.836492009799,60.8912526825187,1.12738587736838,8.82147621659475,7.77654905148359,6.61134040369762,9.42866711387437,4.73077151374179,6.92407708009948,4.1665403150064,3.35549902162275,3.62376181239009,2.88030006257865,1.26404448251271,8.71718425747706,5.75181360123033,2.98817892848929,1.61124026100733,2.58285761215644,1.9231271923195,0.886137163047463,1.71642964911851,1.21930890648,1.31074040677893,1.16949456887703,1.15454209968395,0.467507608726276,25.8472637321341,22.6425672441546,23.7741720015111,28.7082693982574,31.1035246391827,68.6917860151326,72.528043209837,48.4472536718689,56.6776477559961,1.6942555278512,2.76195141904306,2.29158205375759,0.68741272937475,2.74033007908257,1.5107877947794,0.675022500231806,1.35096360967266,0,0.51776031175182,4.35906859853542,4.78829848081237,8.53668028770671,10.4535888339366,8.17491334249131,9.55986243940074,10.4455962066759,11.1258930909003,13.7995260124481,13.1402550117175,10.8996098952803,12.8265912142532,12.9225280308438,12.2928292617349,13.0378514529242,11.9073422820768,16.3396899582246,11.3816440073586,9.06588981767275,13.2479028120958,9.94320831917705,11.5359274003569,9.53744759789284,11.7730597472186,13.5517507798076,13.3691080468849,14.0854539112035,12.6273461490165,13.5804113845862,12.3451299764702,14.1175671567767,14.0861409797056,10.6400071224119,15.4936841185966,16.0112487114347,13.739581786587,17.778802241851,21.0573632967332,8.22539827896026,12.7943023089319,8.34724208233517 | |phase1_expression=13.4525031568027,310.588112799031,336.244437908867,241.36644062285,276.494442930384,146.726483650992,131.290304014685,2.06597317506522,2.956563165185,1.87251621057595,1.02730780935303,0.797721589953364,0.856003649656029,0.437102012094987,0.999329285446988,2.22722794128809,2.09868563438444,4.10100814965709,3.56497527374921,2.97072756258621,19.0496969938396,4.56738375524072,1.56719873483361,225.749308561497,264.738310351514,315.253348299146,260.61100767624,241.543251840882,383.277237043506,368.468049709019,332.595765982957,6.35030673459631,9.22597181376855,0,97.0541442364283,102.400541540831,85.9552989864574,0.418531630736908,2.3440060335714,0.523523743973798,0,0.683045484958446,1.45653105909346,65.9699326192025,66.5032668800015,82.2289449684333,34.4252191513137,10.9012578190223,14.7189742432096,20.0262796046512,19.5980990275508,8.62515386189829,4.02678254538567,0.725362142011344,0,31.6429106324215,19.4842739158355,19.0798674142654,5.46254444320914,10.0508286061686,8.87363964908651,38.2894321238119,25.789549087223,42.2952867122258,35.5991890524111,42.628806896766,30.5592112728773,18.8266969607562,2.69592992002042,3.64516033495565,3.15487442027073,11.7116903605559,11.7060326704355,3.30725157880376,2.1086003624012,1.83843757322004,6.60695285996332,5.36286819957788,7.37311359629969,7.38563211289086,6.03818447775904,6.77187381723788,9.77140496504833,11.2552522006336,8.55670187550137,9.1334861496837,7.40332740155335,8.20157561631323,26.3527152799481,19.7997487479778,12.4641730141721,13.7667820317022,70.0370473718983,17.810205324048,29.2399387851451,28.6737207742295,26.2631065646376,78.0570877407504,89.8859575925926,75.6146689452128,33.94326416618,29.5150898052931,22.9324715735981,42.6640021891999,87.2458895275193,83.8621154722576,100.093840112927,47.0437584442527,3.36619248741323,11.2816025689267,18.0424739836781,16.7456013071678,21.6778567420695,15.2229866958149,17.2855399489486,13.3206586809456,61.7987419335935,5.92857363371638,4.42305275974937,3.88240439873782,1.76673214768315,3.87900202508178,115.562891955236,2.04946557908083,2.72280718857492,228.378607356481,5.87094110079009,9.59844369589452,5.46401976414178,7.9389038884556,5.49000723382352,3.5183218591602,2.43354048269187,1.27857728665165,4.77912502486988,5.84068547043927,11.915205570487,8.08645308965605,31.3376220457757,62.7116730541692,8.32770834961304,8.27647575960503,7.20248519221397,8.13806016312861,5.10273743634959,5.38077625196369,6.46541899462129,58.2082584162785,10.5628316537093,10.0226222488944,10.0292140773451,8.98702502953057,9.45360647367033,12.8853301613202,13.5816210029243,6.96619933864726,9.12877143507205,6.43369767786788,10.2298859782413,7.45652781127807,4.69052119962192,7.74266864282364,8.75955521665278,5.1158700254325,5.24508183817086,4.18561100550734,6.43856163359086,4.43708300995244,3.45575684818309,3.94001913789829,1.94565142910054,2.33919979880532,2.19550115291051,0.939444931322602,3.15434922846191,2.46971069710283,252.439950199622,164.752703031388,12.797295032114,13.9342003116263,44.201539233478,56.0680198452892,72.9399983811175,98.3466487001931,173.677636525291,116.277462035152,87.7159878712941,87.5408476981064,88.5136955520805,173.472145870265,141.138146568175,167.676952080177,16.5011073829181,18.7367560679955,21.4144697778853,21.5870407516033,25.2138233317913,33.5249219075723,28.3299686316673,34.3931644792473,33.911725213737,47.2611137820496,45.6537045714209,12.6802280344231,16.5109555895091,14.8408994174003,16.8373900752457,30.1471449690521,33.355986583366,26.4680446454746,31.1299635408068,40.0859663254599,20.1275489138296,36.8419538191818,33.7000686963725,36.6239373023312,31.5739447798565,47.27946509361,12.0089573608293,12.127450353311,12.2223732331519,19.0114496068211,14.3161051455986,12.8979818230198,14.9967493758189,18.5376965464909,11.0344600874334,12.8449519996289,8.92946704481928,12.2897486036803,14.5055384767352,17.9364832641074,22.6186925908908,12.5098307278303,33.4399705652945,55.1873492609465,11.559642479121,13.1277088983268,17.8689090460576,2.01976741763498,8.83423014365519,7.02789739733949,5.60100834105277,8.84184552424442,8.24355094104858,9.6246020468203,11.7395103485719,11.6902343164525,11.0680577825027,0.963963949265421,16.1811697137426,12.2865266530406,11.2392001953967,24.7455184458803,11.9470624505967,24.5208442516531,28.1160907977218,14.7111962209601,20.6711325016541,21.5204603560749,38.7642439752332,21.0849563096953,19.6073558111597,18.0140952023415,23.1920938864997,22.6898195146011,12.9367050186439,8.10274923140896,8.14959707831353,9.00215547132688,6.0295679438373,7.66985915688903,7.56925494769756,11.2652031172402,44.8222962401687,37.4942765428962,34.4024300965741,23.9085066765146,14.2088695492397,14.8369795323263,24.8294475526524,24.7852758615042,142.242648275367,17.2445530869774,2.39219233116994,5.77883230297023,6.11141940320049,3.20226376907975,3.14396723758358,2.0590035588587,7.81900777971734,9.23679585336143,10.2267980615274,70.6456257331184,12.6534397432454,29.0746837991394,41.9060722388589,44.7448953470963,48.9132142791438,41.40335434014,46.7818559405401,79.312050421161,135.836492009799,60.8912526825187,1.12738587736838,8.82147621659475,7.77654905148359,6.61134040369762,9.42866711387437,4.73077151374179,6.92407708009948,4.1665403150064,3.35549902162275,3.62376181239009,2.88030006257865,1.26404448251271,8.71718425747706,5.75181360123033,2.98817892848929,1.61124026100733,2.58285761215644,1.9231271923195,0.886137163047463,1.71642964911851,1.21930890648,1.31074040677893,1.16949456887703,1.15454209968395,0.467507608726276,25.8472637321341,22.6425672441546,23.7741720015111,28.7082693982574,31.1035246391827,68.6917860151326,72.528043209837,48.4472536718689,56.6776477559961,1.6942555278512,2.76195141904306,2.29158205375759,0.68741272937475,2.74033007908257,1.5107877947794,0.675022500231806,1.35096360967266,0,0.51776031175182,4.35906859853542,4.78829848081237,8.53668028770671,10.4535888339366,8.17491334249131,9.55986243940074,10.4455962066759,11.1258930909003,13.7995260124481,13.1402550117175,10.8996098952803,12.8265912142532,12.9225280308438,12.2928292617349,13.0378514529242,11.9073422820768,16.3396899582246,11.3816440073586,9.06588981767275,13.2479028120958,9.94320831917705,11.5359274003569,9.53744759789284,11.7730597472186,13.5517507798076,13.3691080468849,14.0854539112035,12.6273461490165,13.5804113845862,12.3451299764702,14.1175671567767,14.0861409797056,10.6400071224119,15.4936841185966,16.0112487114347,13.739581786587,17.778802241851,21.0573632967332,8.22539827896026,12.7943023089319,8.34724208233517 | ||
|short_description=p1@Ppap2c | |short_description=p1@Ppap2c | ||
}} | }} |
Latest revision as of 08:44, 26 September 2015
Short description: | p1@Ppap2c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ppap2c_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000063879, ENSMUST00000165233, ENSMUST00000166804, NM_015817, uc007fyr.1, uc007fys.1, uc007fyt.1, uc007fyu.1_5end |
EntrezGene: | Ppap2c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.73e-11 | 25 |
endodermal cell | 5.00e-09 | 20 |
endo-epithelial cell | 9.95e-09 | 15 |
intestinal epithelial cell | 8.64e-07 | 9 |
epithelial cell of alimentary canal | 8.64e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.59e-17 | 31 |
gastrointestinal system | 6.01e-15 | 47 |
endoderm-derived structure | 3.75e-11 | 118 |
endoderm | 3.75e-11 | 118 |
presumptive endoderm | 3.75e-11 | 118 |
mucosa | 8.66e-11 | 15 |
digestive system | 1.58e-10 | 116 |
digestive tract | 1.58e-10 | 116 |
primitive gut | 1.58e-10 | 116 |
subdivision of digestive tract | 1.28e-09 | 114 |
intestinal mucosa | 1.66e-09 | 13 |
wall of intestine | 1.66e-09 | 13 |
gastrointestinal system mucosa | 1.66e-09 | 13 |
trunk | 2.18e-07 | 90 |
trunk region element | 7.65e-07 | 79 |
epithelium of mucosa | 8.64e-07 | 9 |
gastrointestinal system epithelium | 8.64e-07 | 9 |
intestinal epithelium | 8.64e-07 | 9 |