FFCP PHASE1:Mm9::chr10:22022565..22022574,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1888 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=66bp_to_uc007eph.1,uc007epi.1_5end | |association_with_transcript=66bp_to_uc007eph.1,uc007epi.1_5end | ||
|cluster_id=chr10:22022565..22022574,- | |||
|description=CAGE_peak_5_at_uc007eph.1_5end,CAGE_peak_5_at_uc007epi.1_5end | |description=CAGE_peak_5_at_uc007eph.1_5end,CAGE_peak_5_at_uc007epi.1_5end | ||
|id=chr10:22022565..22022574,- | |id=chr10:22022565..22022574,- | ||
|ontology_enrichment_celltype=CL:0000791!4.88e-18!9;CL:0000789!4.88e-18!9;CL:0002420!4.88e-18!9;CL:0002419!4.88e-18!9;CL:0000790!4.88e-18!9;CL:0000624!1.43e-15!8;CL:0000893!2.78e-15!6;CL:0002489!2.78e-15!6;CL:0000898!2.78e-15!6;CL:0000809!2.78e-15!6;CL:0000810!2.78e-15!6;CL:0000895!2.78e-15!6;CL:0000808!2.78e-15!6;CL:0000894!2.78e-15!6;CL:0000806!2.78e-15!6;CL:0000807!2.78e-15!6;CL:0000805!2.78e-15!6;CL:0002425!2.78e-15!6;CL:0002436!2.78e-15!6;CL:0002427!2.78e-15!6;CL:0002428!2.78e-15!6;CL:0002429!2.78e-15!6;CL:0002433!2.78e-15!6;CL:0002431!2.78e-15!6;CL:0002432!2.78e-15!6;CL:0000084!1.68e-14!11;CL:0000827!1.68e-14!11;CL:0000838!3.56e-13!12;CL:0000542!4.72e-12!13;CL:0000051!4.72e-12!13;CL:0000738!6.92e-09!17;CL:0002087!6.92e-09!17;CL:0002031!1.13e-08!25 | |ontology_enrichment_celltype=CL:0000791!4.88e-18!9;CL:0000789!4.88e-18!9;CL:0002420!4.88e-18!9;CL:0002419!4.88e-18!9;CL:0000790!4.88e-18!9;CL:0000624!1.43e-15!8;CL:0000893!2.78e-15!6;CL:0002489!2.78e-15!6;CL:0000898!2.78e-15!6;CL:0000809!2.78e-15!6;CL:0000810!2.78e-15!6;CL:0000895!2.78e-15!6;CL:0000808!2.78e-15!6;CL:0000894!2.78e-15!6;CL:0000806!2.78e-15!6;CL:0000807!2.78e-15!6;CL:0000805!2.78e-15!6;CL:0002425!2.78e-15!6;CL:0002436!2.78e-15!6;CL:0002427!2.78e-15!6;CL:0002428!2.78e-15!6;CL:0002429!2.78e-15!6;CL:0002433!2.78e-15!6;CL:0002431!2.78e-15!6;CL:0002432!2.78e-15!6;CL:0000084!1.68e-14!11;CL:0000827!1.68e-14!11;CL:0000838!3.56e-13!12;CL:0000542!4.72e-12!13;CL:0000051!4.72e-12!13;CL:0000738!6.92e-09!17;CL:0002087!6.92e-09!17;CL:0002031!1.13e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,2.87e-30,1;CL:0000792,2.87e-30,1;CL:0000624,1.45e-15,8;CL:0000791,5.71e-14,9;CL:0000789,5.71e-14,9;CL:0002420,5.71e-14,9;CL:0002419,5.71e-14,9;CL:0000790,5.71e-14,9;CL:0000084,1.21e-11,11;CL:0000827,1.21e-11,11;CL:0000838,9.03e-11,12;CL:0000542,4.98e-10,13;CL:0000051,4.98e-10,13;CL:0000738,6.30e-08,17;CL:0002087,6.30e-08,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!2.65e-20!24;UBERON:0001557!2.65e-20!24;UBERON:0001042!2.65e-20!24;UBERON:0008814!2.65e-20!24;UBERON:0009145!2.65e-20!24;UBERON:0002370!2.58e-18!23;UBERON:0000974!2.58e-18!23;UBERON:0004807!2.58e-18!23;UBERON:0005058!2.58e-18!23;UBERON:0003351!2.58e-18!23;UBERON:0009113!2.58e-18!23;UBERON:0003295!2.58e-18!23;UBERON:0009722!2.58e-18!23;UBERON:0005562!2.58e-18!23;UBERON:0007690!2.58e-18!23;UBERON:0000072!1.13e-17!27;UBERON:0003408!2.01e-17!24;UBERON:0004177!6.89e-14!29;UBERON:0000063!7.23e-13!35;UBERON:0000065!4.13e-12!41;UBERON:0001004!9.75e-12!42;UBERON:0002390!1.22e-10!45;UBERON:0003061!1.22e-10!45;UBERON:0002193!9.30e-10!48;UBERON:0003081!4.49e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001374,5.62e-30,1;UBERON:0004252,5.62e-30,1;UBERON:0003663,5.62e-30,1;UBERON:0005090,5.62e-30,1;UBERON:0001630,5.62e-30,1;UBERON:0003661,5.62e-30,1;UBERON:0010890,5.62e-30,1;UBERON:0001383,5.62e-30,1;UBERON:0005418,4.17e-07,5;UBERON:0002472,4.17e-07,5;UBERON:0008784,4.17e-07,5;UBERON:0006058,4.17e-07,5;UBERON:0004709,4.17e-07,5;UBERON:0002529,4.17e-07,5;UBERON:0010538,4.17e-07,5;UBERON:0005420,4.17e-07,5;UBERON:0010758,4.17e-07,5;UBERON:0000978,4.17e-07,5;UBERON:0002103,4.17e-07,5;UBERON:0000376,4.17e-07,5;UBERON:0000154,4.17e-07,5;UBERON:0010709,4.17e-07,5;UBERON:0005730,4.17e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,5.4231795845462,0.563154888606667,0.468129052643987,0.171217968225505,0.0797721589953364,0.684802919724823,2.53519167015092,0,0,0,0.157731082679119,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0,0,0,4.29200576247434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.32977250588296,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0,0.302478555410522,0.0974578807397524,0.384847366561318,0.701261413089414,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,5.4231795845462,0.563154888606667,0.468129052643987,0.171217968225505,0.0797721589953364,0.684802919724823,2.53519167015092,0,0,0,0.157731082679119,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0,0,0,4.29200576247434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.32977250588296,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0,0.302478555410522,0.0974578807397524,0.384847366561318,0.701261413089414,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0.695603506861264 | ||
|short_description=p5@uc007eph.1,p5@uc007epi.1 | |short_description=p5@uc007eph.1,p5@uc007epi.1 | ||
}} | }} |
Latest revision as of 06:04, 4 August 2015
Short description: | p5@uc007eph.1, p5@uc007epi.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_uc007eph.1_5end, CAGE_peak_5_at_uc007epi.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1888 |
Association with transcript: | 66bp_to_uc007eph.1, uc007epi.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 2.87e-30 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.87e-30 | 1 |
CD4-positive, alpha-beta T cell | 1.45e-15 | 8 |
mature alpha-beta T cell | 5.71e-14 | 9 |
alpha-beta T cell | 5.71e-14 | 9 |
immature T cell | 5.71e-14 | 9 |
mature T cell | 5.71e-14 | 9 |
immature alpha-beta T cell | 5.71e-14 | 9 |
T cell | 1.21e-11 | 11 |
pro-T cell | 1.21e-11 | 11 |
lymphoid lineage restricted progenitor cell | 9.03e-11 | 12 |
lymphocyte | 4.98e-10 | 13 |
common lymphoid progenitor | 4.98e-10 | 13 |
leukocyte | 6.30e-08 | 17 |
nongranular leukocyte | 6.30e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
biceps femoris | 5.62e-30 | 1 |
hindlimb stylopod muscle | 5.62e-30 | 1 |
hindlimb muscle | 5.62e-30 | 1 |
muscle structure | 5.62e-30 | 1 |
muscle organ | 5.62e-30 | 1 |
limb muscle | 5.62e-30 | 1 |
pelvic complex muscle | 5.62e-30 | 1 |
muscle of leg | 5.62e-30 | 1 |
hindlimb bud | 4.17e-07 | 5 |
stylopod | 4.17e-07 | 5 |
lower limb segment | 4.17e-07 | 5 |
multi-limb segment region | 4.17e-07 | 5 |
pelvic appendage | 4.17e-07 | 5 |
limb segment | 4.17e-07 | 5 |
paired limb/fin segment | 4.17e-07 | 5 |
pelvic appendage bud | 4.17e-07 | 5 |
subdivision of organism along appendicular axis | 4.17e-07 | 5 |
leg | 4.17e-07 | 5 |
hindlimb | 4.17e-07 | 5 |
hindlimb stylopod | 4.17e-07 | 5 |
posterior region of body | 4.17e-07 | 5 |
pelvic complex | 4.17e-07 | 5 |
hindlimb/pelvic fin field | 4.17e-07 | 5 |