FFCP PHASE1:Mm9::chr13:29042107..29042118,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=667 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:29042107..29042118,- | |||
|description=CAGE_peak_at_chr13:29042107..29042118,- | |description=CAGE_peak_at_chr13:29042107..29042118,- | ||
|id=chr13:29042107..29042118,- | |id=chr13:29042107..29042118,- | ||
|ontology_enrichment_celltype=CL:0000540!5.44e-09!33;CL:0000047!5.44e-09!33;CL:0000031!5.44e-09!33;CL:0000404!5.44e-09!33;CL:0000393!2.14e-08!39;CL:0000211!2.14e-08!39;CL:0000221!9.65e-08!44;CL:0000133!9.65e-08!44;CL:0002319!1.48e-07!43;CL:0000055!8.22e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.02e-16,33;CL:0000047,6.02e-16,33;CL:0000031,6.02e-16,33;CL:0000404,6.02e-16,33;CL:0000117,8.96e-15,23;CL:0000337,8.96e-15,23;CL:0000393,1.72e-14,39;CL:0000211,1.72e-14,39;CL:0002319,5.88e-14,43;CL:0000221,1.61e-13,44;CL:0000133,1.61e-13,44;CL:0002609,2.25e-13,6;CL:0002321,1.53e-10,70;CL:0002608,1.68e-07,3;CL:0002613,2.57e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.44e-09,34;UBERON:0001016,2.04e-08,75;UBERON:0001017,6.28e-08,73;UBERON:0004121,1.01e-07,95;UBERON:0000924,1.01e-07,95;UBERON:0006601,1.01e-07,95;UBERON:0000369,3.43e-07,5;UBERON:0002435,3.43e-07,5;UBERON:0000204,3.43e-07,5;UBERON:0010082,3.43e-07,5;UBERON:0003528,8.08e-07,29;UBERON:0002791,8.08e-07,29;UBERON:0001893,8.08e-07,29 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0.33575854382378,0.233612640595526,0,0.281577444303333,0.234064526321993,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,0.17008658030214,0.496454756004426,0.261199789138935,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0.816677425049476,0,0,0,0,0,0,0.629484089877886,0.405507724878058,2.20256102594018,0,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0.809265843438391,1.05798195854407,2.53532561402472,0.338844532069132,0.889294796111139,0,0,0,1.19840044207362,0,2.90330914463737,3.64516033495565,4.41682418837902,0.571301968807607,1.10434270475807,2.44981598429908,4.69642807989358,9.19218786610021,0,0,0,2.2420668914133,3.47653045689157,3.12548022334056,0,0,0,1.47314292736834,0.569486723196412,1.1183966749518,1.06016670666458,0.906858721281426,0,0,0,0,0,0,0,0.170430322578058,0,1.06001872353102,0.563373679106722,2.56652954828636,0,0,0.432982082022428,1.26679932737549,1.01104889002957,0.34255163915718,0,0.148442139064825,0.520455980298408,0,0.230615497256059,0,0.23517741427141,0,0.247194967734374,0,0,0.485300549842228,0.220841518460394,0,0,0.292780797011547,0,0,0.479260498023681,0,0.254140454146129,0,0,1.7591609295801,0.173824320192276,0,0,0,0.712875546952214,0.622034853050465,0.252722758433675,0,0.520481771850815,0,1.0803727788321,1.20563854268572,0.748401490664606,0.896796041993948,2.15513966487376,0,0.215567992932842,0.567318240503458,0.351902248327898,0.876782929710299,0.556094498451196,0,0,0.59710280045548,0,0,0.284163499395593,0,0.938104239924385,0.36012412292203,0.710234206755631,0.787056926989615,0.462801338662135,0.465067889500816,0,0.350296027101508,0.16455984991348,0.820837320395476,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,0,1.44066457330998,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,0.685491075658373,0,0.610953983535943,0,0.280543279561274,0.569128834118316,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0.739012760666419,0.757965647081939,0.488894929326078,1.01847051465113,0.234690248288502,0,0.238043640886014,0.390267295715598,0.945810864637146,0.8858587585951,0.797273843287435,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,1.14754461763673,0,0.94652465824877,0.390438744296638,0.646270193198397,0.716906393857656,0.445597348164788,3.11384183867716,0.809621403349789,1.16902343164525,1.18586333383957,0.321321316421807,0,0.35613120733451,0,0.164970122972535,0,1.69946445308487,0.604647113929502,0,0,0.614870295887855,0,0,0.712994756769443,0,1.05418608574999,0,0,0.36012218806262,0.905510786479282,1.07168517515796,0.532020700926821,0,0.658196082408484,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.322928853391811,0.0603129249281559,0.358117032009409,0.328281799490123,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0.279902904647316,0.414599921413271,0,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.330613822901344,0,0.388844919875379,0.621339313086926,0.56369293868419,0.897099276263873,0.330916980914195,0.777804753376191,0.129159823477731,0.506868376472335,1.05621514781179,0.39061315453185,0.314578033277133,0.241584120826006,0,0.632022241256357,0.405450430580328,0.308132871494482,0.389762468933385,0.358053391334963,0.39736270956253,0.480781798079875,0.443068581523732,0.403865799792591,0.381034033274999,0.403304740547362,1.55932609183604,0.384847366561318,1.05189211963412,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.36630324853453,1.50057865355346,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0.675022500231806,0,0,0,1.97195960409936,0,0.512200817262403,0.486213434136588,1.67690530102386,0.919217542250071,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,0.754505365544305,0.468207537349412,0.448176066834085,0.574354689556133,0.952587382566147,0.579421629724277,0.964546102318525,0,0.588795680537589,2.05721551431249,0.532427418478012,1.43061713968393,0.581385666529314,0.752875043322645,1.01537529470012,0.73171189149109,1.31534855718921,0.271608227691724,1.12228454331548,0.474540072496697,0.197008964751127,0.409231043169689,1.08455788830176,0.385813221962283,0.249810577937946,0.233931608445408,1.07435527024149,0,0.441182838239031,0.463735671240843 | |phase1_expression=1.44133962394315,0,0,0,0,0.33575854382378,0.233612640595526,0,0.281577444303333,0.234064526321993,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,0.17008658030214,0.496454756004426,0.261199789138935,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0.816677425049476,0,0,0,0,0,0,0.629484089877886,0.405507724878058,2.20256102594018,0,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0.809265843438391,1.05798195854407,2.53532561402472,0.338844532069132,0.889294796111139,0,0,0,1.19840044207362,0,2.90330914463737,3.64516033495565,4.41682418837902,0.571301968807607,1.10434270475807,2.44981598429908,4.69642807989358,9.19218786610021,0,0,0,2.2420668914133,3.47653045689157,3.12548022334056,0,0,0,1.47314292736834,0.569486723196412,1.1183966749518,1.06016670666458,0.906858721281426,0,0,0,0,0,0,0,0.170430322578058,0,1.06001872353102,0.563373679106722,2.56652954828636,0,0,0.432982082022428,1.26679932737549,1.01104889002957,0.34255163915718,0,0.148442139064825,0.520455980298408,0,0.230615497256059,0,0.23517741427141,0,0.247194967734374,0,0,0.485300549842228,0.220841518460394,0,0,0.292780797011547,0,0,0.479260498023681,0,0.254140454146129,0,0,1.7591609295801,0.173824320192276,0,0,0,0.712875546952214,0.622034853050465,0.252722758433675,0,0.520481771850815,0,1.0803727788321,1.20563854268572,0.748401490664606,0.896796041993948,2.15513966487376,0,0.215567992932842,0.567318240503458,0.351902248327898,0.876782929710299,0.556094498451196,0,0,0.59710280045548,0,0,0.284163499395593,0,0.938104239924385,0.36012412292203,0.710234206755631,0.787056926989615,0.462801338662135,0.465067889500816,0,0.350296027101508,0.16455984991348,0.820837320395476,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,0,1.44066457330998,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,0.685491075658373,0,0.610953983535943,0,0.280543279561274,0.569128834118316,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0.739012760666419,0.757965647081939,0.488894929326078,1.01847051465113,0.234690248288502,0,0.238043640886014,0.390267295715598,0.945810864637146,0.8858587585951,0.797273843287435,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,1.14754461763673,0,0.94652465824877,0.390438744296638,0.646270193198397,0.716906393857656,0.445597348164788,3.11384183867716,0.809621403349789,1.16902343164525,1.18586333383957,0.321321316421807,0,0.35613120733451,0,0.164970122972535,0,1.69946445308487,0.604647113929502,0,0,0.614870295887855,0,0,0.712994756769443,0,1.05418608574999,0,0,0.36012218806262,0.905510786479282,1.07168517515796,0.532020700926821,0,0.658196082408484,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.322928853391811,0.0603129249281559,0.358117032009409,0.328281799490123,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0.279902904647316,0.414599921413271,0,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.330613822901344,0,0.388844919875379,0.621339313086926,0.56369293868419,0.897099276263873,0.330916980914195,0.777804753376191,0.129159823477731,0.506868376472335,1.05621514781179,0.39061315453185,0.314578033277133,0.241584120826006,0,0.632022241256357,0.405450430580328,0.308132871494482,0.389762468933385,0.358053391334963,0.39736270956253,0.480781798079875,0.443068581523732,0.403865799792591,0.381034033274999,0.403304740547362,1.55932609183604,0.384847366561318,1.05189211963412,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.36630324853453,1.50057865355346,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0.675022500231806,0,0,0,1.97195960409936,0,0.512200817262403,0.486213434136588,1.67690530102386,0.919217542250071,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,0.754505365544305,0.468207537349412,0.448176066834085,0.574354689556133,0.952587382566147,0.579421629724277,0.964546102318525,0,0.588795680537589,2.05721551431249,0.532427418478012,1.43061713968393,0.581385666529314,0.752875043322645,1.01537529470012,0.73171189149109,1.31534855718921,0.271608227691724,1.12228454331548,0.474540072496697,0.197008964751127,0.409231043169689,1.08455788830176,0.385813221962283,0.249810577937946,0.233931608445408,1.07435527024149,0,0.441182838239031,0.463735671240843 | ||
|short_description=p@chr13:29042107..29042118,- | |short_description=p@chr13:29042107..29042118,- | ||
}} | }} |
Latest revision as of 21:01, 5 August 2015
Short description: | p@chr13:29042107..29042118, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:29042107..29042118, - |
Coexpression cluster: | MCL_coexpression_mm9:667 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.02e-16 | 33 |
neuronal stem cell | 6.02e-16 | 33 |
neuroblast | 6.02e-16 | 33 |
electrically signaling cell | 6.02e-16 | 33 |
CNS neuron (sensu Vertebrata) | 8.96e-15 | 23 |
neuroblast (sensu Vertebrata) | 8.96e-15 | 23 |
electrically responsive cell | 1.72e-14 | 39 |
electrically active cell | 1.72e-14 | 39 |
neural cell | 5.88e-14 | 43 |
ectodermal cell | 1.61e-13 | 44 |
neurectodermal cell | 1.61e-13 | 44 |
neuron of cerebral cortex | 2.25e-13 | 6 |
embryonic cell | 1.53e-10 | 70 |
hippocampal neuron | 1.68e-07 | 3 |
striatum neuron | 2.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 6.44e-09 | 34 |
nervous system | 2.04e-08 | 75 |
central nervous system | 6.28e-08 | 73 |
ectoderm-derived structure | 1.01e-07 | 95 |
ectoderm | 1.01e-07 | 95 |
presumptive ectoderm | 1.01e-07 | 95 |
corpus striatum | 3.43e-07 | 5 |
striatum | 3.43e-07 | 5 |
ventral part of telencephalon | 3.43e-07 | 5 |
future corpus striatum | 3.43e-07 | 5 |
brain grey matter | 8.08e-07 | 29 |
regional part of telencephalon | 8.08e-07 | 29 |
telencephalon | 8.08e-07 | 29 |