FFCP PHASE1:Mm9::chr12:24587988..24588001,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=308 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:24587988..24588001,+ | |||
|description=CAGE_peak_at_chr12:24587988..24588001,+ | |description=CAGE_peak_at_chr12:24587988..24588001,+ | ||
|id=chr12:24587988..24588001,+ | |id=chr12:24587988..24588001,+ | ||
|ontology_enrichment_celltype=CL:0000063!1.49e-32!66;CL:0000144!2.43e-24!121;CL:0000012!2.43e-24!121;CL:0002371!7.80e-23!118;CL:0000066!4.66e-22!25;CL:0000548!2.92e-21!115;CL:0000004!2.92e-21!115;CL:0000255!2.92e-21!115;CL:0002076!9.39e-20!15;CL:0000223!2.94e-16!20;CL:0002563!4.58e-13!9;CL:0002251!4.58e-13!9;CL:0002320!1.82e-11!46;CL:0000134!1.82e-11!46;CL:0000219!1.84e-11!54;CL:0000988!1.89e-11!32;CL:0002032!1.89e-11!32;CL:0000037!1.89e-11!32;CL:0000566!1.89e-11!32;CL:0000837!1.89e-11!32;CL:0002031!1.39e-10!25;CL:0000075!1.50e-10!7;CL:0000034!2.17e-10!97;CL:0000239!2.30e-09!6;CL:0000677!2.30e-09!6;CL:0000212!2.30e-09!6;CL:0000584!2.30e-09!6;CL:0000049!5.50e-08!19;CL:0000723!2.40e-07!91;CL:0000048!2.40e-07!91;CL:0000738!3.26e-07!17;CL:0002087!3.26e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.46e-19,15;CL:0000223,2.54e-17,20;CL:0000066,1.59e-13,25;CL:0000215,1.37e-12,3;CL:0000068,2.77e-12,3;CL:0002202,2.77e-12,3;CL:0000069,2.77e-12,3;CL:0002632,2.77e-12,3;CL:0002368,2.77e-12,3;CL:0000307,2.77e-12,3;CL:0000377,2.77e-12,3;CL:0000349,7.32e-11,3;CL:0000351,7.32e-11,3;CL:0000239,1.00e-09,6;CL:0000677,1.00e-09,6;CL:0000584,1.00e-09,6;CL:0000217,4.39e-09,2;CL:0000328,4.39e-09,2;CL:0002573,4.39e-09,2;CL:0002376,4.39e-09,2;CL:0000218,4.39e-09,2;CL:0000692,4.39e-09,2;CL:0002377,4.39e-09,2;CL:0002375,4.39e-09,2;CL:0002476,2.12e-08,2;CL:0000075,2.35e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!1.55e-15!11;UBERON:0000344!3.84e-15!15;UBERON:0003350!4.58e-13!9;UBERON:0004808!4.58e-13!9;UBERON:0001277!4.58e-13!9;UBERON:0001242!1.93e-12!13;UBERON:0000060!1.93e-12!13;UBERON:0001262!1.93e-12!13;UBERON:0004786!1.93e-12!13;UBERON:0002384!1.82e-11!46;UBERON:0004923!2.80e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.77e-12,3;UBERON:0001005,2.77e-12,3;UBERON:0007196,2.77e-12,3;UBERON:0001558,2.77e-12,3;UBERON:0000358,7.32e-11,3;UBERON:0000307,7.32e-11,3;UBERON:0007010,7.32e-11,3 | |||
|phase1_expression=0.80074423552397,0.348975407639361,1.36499771816861,1.20985684522732,2.00358291978539,0.33575854382378,1.16806320297763,0.516493293766305,0,0,0.68487187290202,0,0.342401459862411,0.874204024189974,0,0.809901069559304,1.39912375625629,0.788655413395594,0.411343300817216,0.84877930359606,0,0,2.08959831311148,1.11994695955385,0.91763712426868,0.57423196411502,0.430761996159075,0.430942465371778,0.760093677825496,0.252030129759931,0,0,0,0,0.866554859253824,0.997407872150954,0.408338712524738,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80186915332781,4.60986516651392,2.31891590961342,0.860423876981386,0,0,0,0,0,0,2.33807404142582,4.94675404314476,0.704217098883403,5.13305909657271,2.54805239706646,0,3.46385665617943,2.53359865475099,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,1.34570784914214,1.00730769818447,0,0,0,0,0,0,0,0,3.26521046453006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.80074423552397,0.348975407639361,1.36499771816861,1.20985684522732,2.00358291978539,0.33575854382378,1.16806320297763,0.516493293766305,0,0,0.68487187290202,0,0.342401459862411,0.874204024189974,0,0.809901069559304,1.39912375625629,0.788655413395594,0.411343300817216,0.84877930359606,0,0,2.08959831311148,1.11994695955385,0.91763712426868,0.57423196411502,0.430761996159075,0.430942465371778,0.760093677825496,0.252030129759931,0,0,0,0,0.866554859253824,0.997407872150954,0.408338712524738,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80186915332781,4.60986516651392,2.31891590961342,0.860423876981386,0,0,0,0,0,0,2.33807404142582,4.94675404314476,0.704217098883403,5.13305909657271,2.54805239706646,0,3.46385665617943,2.53359865475099,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,1.34570784914214,1.00730769818447,0,0,0,0,0,0,0,0,3.26521046453006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:24587988..24588001,+ | |short_description=p@chr12:24587988..24588001,+ | ||
}} | }} |
Latest revision as of 21:59, 4 August 2015
Short description: | p@chr12:24587988..24588001, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:24587988..24588001, + |
Coexpression cluster: | MCL_coexpression_mm9:308 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.46e-19 | 15 |
endodermal cell | 2.54e-17 | 20 |
epithelial cell | 1.59e-13 | 25 |
barrier cell | 1.37e-12 | 3 |
duct epithelial cell | 2.77e-12 | 3 |
epithelial cell of tracheobronchial tree | 2.77e-12 | 3 |
branched duct epithelial cell | 2.77e-12 | 3 |
epithelial cell of lower respiratory tract | 2.77e-12 | 3 |
respiratory epithelial cell | 2.77e-12 | 3 |
tracheal epithelial cell | 2.77e-12 | 3 |
tracheoblast | 2.77e-12 | 3 |
extraembryonic cell | 7.32e-11 | 3 |
trophoblast cell | 7.32e-11 | 3 |
brush border epithelial cell | 1.00e-09 | 6 |
gut absorptive cell | 1.00e-09 | 6 |
enterocyte | 1.00e-09 | 6 |
insulating cell | 4.39e-09 | 2 |
myelin accumulating cell | 4.39e-09 | 2 |
Schwann cell | 4.39e-09 | 2 |
non-myelinating Schwann cell | 4.39e-09 | 2 |
myelinating Schwann cell;;Schwann cell | 4.39e-09 | 2 |
terminal Schwann cell | 4.39e-09 | 2 |
immature Schwann cell | 4.39e-09 | 2 |
Schwann cell precursor | 4.39e-09 | 2 |
bone marrow macrophage | 2.12e-08 | 2 |
columnar/cuboidal epithelial cell | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.77e-12 | 3 |
respiratory airway | 2.77e-12 | 3 |
tracheobronchial tree | 2.77e-12 | 3 |
lower respiratory tract | 2.77e-12 | 3 |
blastocyst | 7.32e-11 | 3 |
blastula | 7.32e-11 | 3 |
cleaving embryo | 7.32e-11 | 3 |