FFCP PHASE1:Mm9::chr11:86399900..86399905,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1093 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:86399900..86399905,- | |||
|description=CAGE_peak_at_chr11:86399900..86399905,- | |description=CAGE_peak_at_chr11:86399900..86399905,- | ||
|id=chr11:86399900..86399905,- | |id=chr11:86399900..86399905,- | ||
|ontology_enrichment_celltype=CL:0000219!4.26e-13!54;CL:0002320!2.06e-11!46;CL:0000134!2.06e-11!46;CL:0000063!2.95e-11!66;CL:0000144!1.87e-09!121;CL:0000012!1.87e-09!121;CL:0000548!3.83e-08!115;CL:0000004!3.83e-08!115;CL:0000255!3.83e-08!115;CL:0002371!4.46e-08!118;CL:0000034!2.83e-07!97;CL:0000723!9.91e-07!91;CL:0000048!9.91e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.23e-15,6;CL:0000187,2.23e-15,6;CL:0000056,2.23e-15,6;CL:0000355,1.86e-13,9;CL:0000222,4.24e-13,7;CL:0000034,1.69e-12,97;CL:0002320,1.90e-10,46;CL:0000134,1.90e-10,46;CL:0002092,5.43e-10,3;CL:0002540,5.43e-10,3;CL:0000068,5.81e-10,3;CL:0002202,5.81e-10,3;CL:0000069,5.81e-10,3;CL:0002632,5.81e-10,3;CL:0002368,5.81e-10,3;CL:0000307,5.81e-10,3;CL:0000377,5.81e-10,3;CL:0000723,7.31e-10,91;CL:0000048,7.31e-10,91;CL:0000219,9.18e-10,54;CL:0000192,1.10e-08,3;CL:0000359,1.10e-08,3;CL:0002539,1.10e-08,3;CL:0000514,1.10e-08,3;CL:0002494,2.58e-08,3;CL:0000737,2.58e-08,3;CL:0000746,2.58e-08,3;CL:0000513,2.58e-08,3;CL:0000049,1.41e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.06e-11!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.12e-14,32;UBERON:0001134,1.86e-13,9;UBERON:0002036,1.86e-13,9;UBERON:0002385,1.86e-13,9;UBERON:0000486,1.86e-13,9;UBERON:0007503,1.86e-13,9;UBERON:0001015,1.86e-13,9;UBERON:0002329,1.86e-13,9;UBERON:0003082,1.86e-13,9;UBERON:0003059,1.86e-13,9;UBERON:0007282,1.86e-13,9;UBERON:0004290,1.86e-13,9;UBERON:0009618,1.86e-13,9;UBERON:0000383,5.08e-12,10;UBERON:0007524,7.60e-11,11;UBERON:0003077,7.60e-11,11;UBERON:0007285,7.60e-11,11;UBERON:0002384,1.90e-10,46;UBERON:0003126,5.81e-10,3;UBERON:0001005,5.81e-10,3;UBERON:0007196,5.81e-10,3;UBERON:0001558,5.81e-10,3;UBERON:0001135,1.10e-08,3;UBERON:0004237,1.10e-08,3;UBERON:0004695,1.10e-08,3;UBERON:0002111,1.10e-08,3;UBERON:0004178,1.10e-08,3;UBERON:0002371,8.71e-08,16 | |||
|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0.516493293766305,0.422366166455,0,0.68487187290202,0.239316476986009,0.171200729931206,0,0,0.202475267389826,0,0,0,0,0.17008658030214,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0.570070258369122,0.252030129759931,0.443461021310609,1.27006134691926,1.23012957516914,0,0.288851619751275,0.332469290716985,0.204169356262369,1.25559489221072,0,0,2.94115744015507,0.683045484958446,0.485510353031154,1.00717454380462,2.02753862439029,2.0190142737785,1.56478268869608,0,0.219686182734472,0.388859798148567,0.55994568650145,0,0.335565212115473,0.725362142011344,0.672187598284928,1.28629718017973,1.71920063963254,1.03134418455488,0,0,0,0.338844532069132,0.889294796111139,4.04954872776629,5.93319817540185,4.2628806896766,0.898800331555214,1.53687322128622,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0.142371680799103,0,0.832988126665025,0.831287161174641,0.289864488701678,0,2.719885334831,6.47643829965381,3.24888208723835,0.448026887097336,0,0.340860645156116,1.55871602761721,0,0.14084341977668,0,0,0,5.19578498426914,5.06719730950197,3.53867111510348,0.45673551887624,0.517875767294343,0,0,0.304465478312141,0,0,0,0.125666591329675,0.741584903203122,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,1.31796636956512,0.599902730993408,1.52484272487678,0,0.457500602818626,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0.51469581422943,1.13665399758237,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0.38992817423824,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0,0,0,0,0.470996183524124,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.486405680325106,0.274561413188081,2.87536413054709,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0,0,0.390267295715598,0,0,0.159454768657487,0.327726629431476,0.518054945597687,0,3.01582567878545,1.08781136763742,0.983528546038072,0,0,0,0.163934945376675,0,0,0,0,0,0.222798674082394,0.283076530788832,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0,0.659880491890142,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0,0.512612642393558,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,1.86976272993241,1.53946597556024,1.93479963326193,0,0,0,0.324016022465404,0,0.218362563746178,0.539457385539283,0.247960367176008,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0.403865799792591,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,1.68914227906064,1.09890974560359,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 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|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0.516493293766305,0.422366166455,0,0.68487187290202,0.239316476986009,0.171200729931206,0,0,0.202475267389826,0,0,0,0,0.17008658030214,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0.570070258369122,0.252030129759931,0.443461021310609,1.27006134691926,1.23012957516914,0,0.288851619751275,0.332469290716985,0.204169356262369,1.25559489221072,0,0,2.94115744015507,0.683045484958446,0.485510353031154,1.00717454380462,2.02753862439029,2.0190142737785,1.56478268869608,0,0.219686182734472,0.388859798148567,0.55994568650145,0,0.335565212115473,0.725362142011344,0.672187598284928,1.28629718017973,1.71920063963254,1.03134418455488,0,0,0,0.338844532069132,0.889294796111139,4.04954872776629,5.93319817540185,4.2628806896766,0.898800331555214,1.53687322128622,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0.142371680799103,0,0.832988126665025,0.831287161174641,0.289864488701678,0,2.719885334831,6.47643829965381,3.24888208723835,0.448026887097336,0,0.340860645156116,1.55871602761721,0,0.14084341977668,0,0,0,5.19578498426914,5.06719730950197,3.53867111510348,0.45673551887624,0.517875767294343,0,0,0.304465478312141,0,0,0,0.125666591329675,0.741584903203122,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,1.31796636956512,0.599902730993408,1.52484272487678,0,0.457500602818626,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0.51469581422943,1.13665399758237,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0.38992817423824,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0,0,0,0,0.470996183524124,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.486405680325106,0.274561413188081,2.87536413054709,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0,0,0.390267295715598,0,0,0.159454768657487,0.327726629431476,0.518054945597687,0,3.01582567878545,1.08781136763742,0.983528546038072,0,0,0,0.163934945376675,0,0,0,0,0,0.222798674082394,0.283076530788832,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0,0.659880491890142,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0,0.512612642393558,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,1.86976272993241,1.53946597556024,1.93479963326193,0,0,0,0.324016022465404,0,0.218362563746178,0.539457385539283,0.247960367176008,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0.403865799792591,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,1.68914227906064,1.09890974560359,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr11:86399900..86399905,- | |short_description=p@chr11:86399900..86399905,- | ||
}} | }} |
Latest revision as of 06:11, 4 August 2015
Short description: | p@chr11:86399900..86399905, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:86399900..86399905, - |
Coexpression cluster: | MCL_coexpression_mm9:1093 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.23e-15 | 6 |
muscle cell | 2.23e-15 | 6 |
myoblast | 2.23e-15 | 6 |
multi-potent skeletal muscle stem cell | 1.86e-13 | 9 |
mesodermal cell | 4.24e-13 | 7 |
stem cell | 1.69e-12 | 97 |
connective tissue cell | 1.90e-10 | 46 |
mesenchymal cell | 1.90e-10 | 46 |
bone marrow cell | 5.43e-10 | 3 |
mesenchymal stem cell of the bone marrow | 5.43e-10 | 3 |
duct epithelial cell | 5.81e-10 | 3 |
epithelial cell of tracheobronchial tree | 5.81e-10 | 3 |
branched duct epithelial cell | 5.81e-10 | 3 |
epithelial cell of lower respiratory tract | 5.81e-10 | 3 |
respiratory epithelial cell | 5.81e-10 | 3 |
tracheal epithelial cell | 5.81e-10 | 3 |
tracheoblast | 5.81e-10 | 3 |
somatic stem cell | 7.31e-10 | 91 |
multi fate stem cell | 7.31e-10 | 91 |
motile cell | 9.18e-10 | 54 |
smooth muscle cell | 1.10e-08 | 3 |
vascular associated smooth muscle cell | 1.10e-08 | 3 |
aortic smooth muscle cell | 1.10e-08 | 3 |
smooth muscle myoblast | 1.10e-08 | 3 |
cardiocyte | 2.58e-08 | 3 |
striated muscle cell | 2.58e-08 | 3 |
cardiac muscle cell | 2.58e-08 | 3 |
cardiac muscle myoblast | 2.58e-08 | 3 |
common myeloid progenitor | 1.41e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 9.12e-14 | 32 |
skeletal muscle tissue | 1.86e-13 | 9 |
striated muscle tissue | 1.86e-13 | 9 |
muscle tissue | 1.86e-13 | 9 |
multilaminar epithelium | 1.86e-13 | 9 |
epithelial vesicle | 1.86e-13 | 9 |
musculature | 1.86e-13 | 9 |
somite | 1.86e-13 | 9 |
myotome | 1.86e-13 | 9 |
presomitic mesoderm | 1.86e-13 | 9 |
presumptive segmental plate | 1.86e-13 | 9 |
dermomyotome | 1.86e-13 | 9 |
trunk paraxial mesoderm | 1.86e-13 | 9 |
musculature of body | 5.08e-12 | 10 |
dense mesenchyme tissue | 7.60e-11 | 11 |
paraxial mesoderm | 7.60e-11 | 11 |
presumptive paraxial mesoderm | 7.60e-11 | 11 |
connective tissue | 1.90e-10 | 46 |
trachea | 5.81e-10 | 3 |
respiratory airway | 5.81e-10 | 3 |
tracheobronchial tree | 5.81e-10 | 3 |
lower respiratory tract | 5.81e-10 | 3 |
smooth muscle tissue | 1.10e-08 | 3 |
blood vessel smooth muscle | 1.10e-08 | 3 |
arterial system smooth muscle | 1.10e-08 | 3 |
artery smooth muscle tissue | 1.10e-08 | 3 |
aorta smooth muscle tissue | 1.10e-08 | 3 |
bone marrow | 8.71e-08 | 16 |