FFCP PHASE1:Mm9::chr11:86390786..86390792,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:86390786..86390792,- | |||
|description=CAGE_peak_at_chr11:86390786..86390792,- | |description=CAGE_peak_at_chr11:86390786..86390792,- | ||
|id=chr11:86390786..86390792,- | |id=chr11:86390786..86390792,- | ||
|ontology_enrichment_celltype=CL:0000063!4.99e-11!66;CL:0000144!1.93e-10!121;CL:0000012!1.93e-10!121;CL:0002371!9.30e-09!118;CL:0000355!2.77e-08!9;CL:0000548!3.38e-07!115;CL:0000004!3.38e-07!115;CL:0000255!3.38e-07!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.13e-08,9;CL:0002092,1.79e-08,3;CL:0002540,1.79e-08,3;CL:0000068,4.07e-08,3;CL:0002202,4.07e-08,3;CL:0000069,4.07e-08,3;CL:0002632,4.07e-08,3;CL:0002368,4.07e-08,3;CL:0000307,4.07e-08,3;CL:0000377,4.07e-08,3;CL:0000151,2.09e-07,3;CL:0000499,2.09e-07,3;CL:0000327,2.09e-07,3;CL:0000066,4.02e-07,25;CL:0000192,8.89e-07,3;CL:0000359,8.89e-07,3;CL:0002539,8.89e-07,3;CL:0000514,8.89e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.10e-08,3;DOID:4045,3.10e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!2.78e-09!32;UBERON:0001134!2.77e-08!9;UBERON:0002036!2.77e-08!9;UBERON:0002385!2.77e-08!9;UBERON:0000486!2.77e-08!9;UBERON:0001015!2.77e-08!9;UBERON:0004290!2.77e-08!9;UBERON:0003082!2.77e-08!9;UBERON:0002329!8.83e-08!11;UBERON:0003077!8.83e-08!11;UBERON:0003059!8.83e-08!11;UBERON:0007282!8.83e-08!11;UBERON:0009618!8.83e-08!11;UBERON:0007285!8.83e-08!11;UBERON:0000383!3.37e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.43e-09,32;UBERON:0001134,1.13e-08,9;UBERON:0002036,1.13e-08,9;UBERON:0002385,1.13e-08,9;UBERON:0000486,1.13e-08,9;UBERON:0007503,1.13e-08,9;UBERON:0001015,1.13e-08,9;UBERON:0002329,1.13e-08,9;UBERON:0003082,1.13e-08,9;UBERON:0003059,1.13e-08,9;UBERON:0007282,1.13e-08,9;UBERON:0004290,1.13e-08,9;UBERON:0009618,1.13e-08,9;UBERON:0003126,4.07e-08,3;UBERON:0001005,4.07e-08,3;UBERON:0007196,4.07e-08,3;UBERON:0001558,4.07e-08,3;UBERON:0000383,9.82e-08,10;UBERON:0007524,5.75e-07,11;UBERON:0003077,5.75e-07,11;UBERON:0007285,5.75e-07,11;UBERON:0000055,6.95e-07,5;UBERON:0007500,6.95e-07,5;UBERON:0001981,6.95e-07,5;UBERON:0002049,6.95e-07,5;UBERON:0007798,6.95e-07,5;UBERON:0004537,6.95e-07,5;UBERON:0006965,6.95e-07,5;UBERON:0001135,8.89e-07,3;UBERON:0004237,8.89e-07,3;UBERON:0004695,8.89e-07,3;UBERON:0002111,8.89e-07,3;UBERON:0004178,8.89e-07,3 | |||
|phase1_expression=0.480446541314382,1.39590163055744,1.36499771816861,0,0,1.17515490338323,2.10251376535973,0.387369970324729,0.281577444303333,0.70219357896598,0.171217968225505,0.0797721589953364,0.171200729931206,0,0.333109761815663,0,0,0.630924330716475,0,0,0.17008658030214,0,0,1.27993938234725,3.89995777814189,2.29692785646008,0.430761996159075,2.15471232685889,0.190023419456374,0,5.09980174507201,0,0,0,0.866554859253824,0,0.408338712524738,5.4409111995798,5.4693474116666,4.18818995179039,51.1761394586982,21.8574555186703,8.73918635456076,1.25896817975577,1.11514624341466,2.56965453026354,0,0,0.439372365468944,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0.528990979272033,0,2.37191172448392,2.66788438833342,5.39939830368839,6.92206453796882,5.6838409195688,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.681535739998656,2.04043212288321,1.73918693221007,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,4.76280290224671,3.54703811665138,6.0662933401774,0.11418387971906,0,0.29688427812965,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,1.91704199209472,1.19980546198682,0.508280908292259,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,2.1066395619397,1.28673953557358,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0.238043640886014,0.390267295715598,0,0,0,0.163863314715738,0,0.289298117163023,1.50791283939272,4.89515115436839,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0.619160603889667,0.925972636848558,0,0,0,6.79913719975421,4.05859211738608,2.21119958087078,0,0,0,0.108005340821801,0,0.436725127492355,0.404593039154462,0.41326727862668,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.563047426353546,1.28206136987086,1.2862102744744,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0.480446541314382,1.39590163055744,1.36499771816861,0,0,1.17515490338323,2.10251376535973,0.387369970324729,0.281577444303333,0.70219357896598,0.171217968225505,0.0797721589953364,0.171200729931206,0,0.333109761815663,0,0,0.630924330716475,0,0,0.17008658030214,0,0,1.27993938234725,3.89995777814189,2.29692785646008,0.430761996159075,2.15471232685889,0.190023419456374,0,5.09980174507201,0,0,0,0.866554859253824,0,0.408338712524738,5.4409111995798,5.4693474116666,4.18818995179039,51.1761394586982,21.8574555186703,8.73918635456076,1.25896817975577,1.11514624341466,2.56965453026354,0,0,0.439372365468944,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0.528990979272033,0,2.37191172448392,2.66788438833342,5.39939830368839,6.92206453796882,5.6838409195688,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.681535739998656,2.04043212288321,1.73918693221007,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,4.76280290224671,3.54703811665138,6.0662933401774,0.11418387971906,0,0.29688427812965,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,1.91704199209472,1.19980546198682,0.508280908292259,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,2.1066395619397,1.28673953557358,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0.238043640886014,0.390267295715598,0,0,0,0.163863314715738,0,0.289298117163023,1.50791283939272,4.89515115436839,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0.619160603889667,0.925972636848558,0,0,0,6.79913719975421,4.05859211738608,2.21119958087078,0,0,0,0.108005340821801,0,0.436725127492355,0.404593039154462,0.41326727862668,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.563047426353546,1.28206136987086,1.2862102744744,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr11:86390786..86390792,- | |short_description=p@chr11:86390786..86390792,- | ||
}} | }} |
Latest revision as of 06:07, 4 August 2015
Short description: | p@chr11:86390786..86390792, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:86390786..86390792, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.13e-08 | 9 |
bone marrow cell | 1.79e-08 | 3 |
mesenchymal stem cell of the bone marrow | 1.79e-08 | 3 |
duct epithelial cell | 4.07e-08 | 3 |
epithelial cell of tracheobronchial tree | 4.07e-08 | 3 |
branched duct epithelial cell | 4.07e-08 | 3 |
epithelial cell of lower respiratory tract | 4.07e-08 | 3 |
respiratory epithelial cell | 4.07e-08 | 3 |
tracheal epithelial cell | 4.07e-08 | 3 |
tracheoblast | 4.07e-08 | 3 |
secretory cell | 2.09e-07 | 3 |
stromal cell | 2.09e-07 | 3 |
extracellular matrix secreting cell | 2.09e-07 | 3 |
epithelial cell | 4.02e-07 | 25 |
smooth muscle cell | 8.89e-07 | 3 |
vascular associated smooth muscle cell | 8.89e-07 | 3 |
aortic smooth muscle cell | 8.89e-07 | 3 |
smooth muscle myoblast | 8.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.43e-09 | 32 |
skeletal muscle tissue | 1.13e-08 | 9 |
striated muscle tissue | 1.13e-08 | 9 |
muscle tissue | 1.13e-08 | 9 |
multilaminar epithelium | 1.13e-08 | 9 |
epithelial vesicle | 1.13e-08 | 9 |
musculature | 1.13e-08 | 9 |
somite | 1.13e-08 | 9 |
myotome | 1.13e-08 | 9 |
presomitic mesoderm | 1.13e-08 | 9 |
presumptive segmental plate | 1.13e-08 | 9 |
dermomyotome | 1.13e-08 | 9 |
trunk paraxial mesoderm | 1.13e-08 | 9 |
trachea | 4.07e-08 | 3 |
respiratory airway | 4.07e-08 | 3 |
tracheobronchial tree | 4.07e-08 | 3 |
lower respiratory tract | 4.07e-08 | 3 |
musculature of body | 9.82e-08 | 10 |
dense mesenchyme tissue | 5.75e-07 | 11 |
paraxial mesoderm | 5.75e-07 | 11 |
presumptive paraxial mesoderm | 5.75e-07 | 11 |
vessel | 6.95e-07 | 5 |
epithelial tube open at both ends | 6.95e-07 | 5 |
blood vessel | 6.95e-07 | 5 |
vasculature | 6.95e-07 | 5 |
vascular system | 6.95e-07 | 5 |
blood vasculature | 6.95e-07 | 5 |
vascular cord | 6.95e-07 | 5 |
smooth muscle tissue | 8.89e-07 | 3 |
blood vessel smooth muscle | 8.89e-07 | 3 |
arterial system smooth muscle | 8.89e-07 | 3 |
artery smooth muscle tissue | 8.89e-07 | 3 |
aorta smooth muscle tissue | 8.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.10e-08 | 3 |
muscle cancer | 3.10e-08 | 3 |