FFCP PHASE1:Mm9::chr11:78128562..78128578,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54141 | |EntrezGene=54141 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-280bp_to_ENSMUST00000150016_5end | |association_with_transcript=-280bp_to_ENSMUST00000150016_5end | ||
|cluster_id=chr11:78128562..78128578,+ | |||
|description=CAGE_peak_3_at_Spag5_5end | |description=CAGE_peak_3_at_Spag5_5end | ||
|id=chr11:78128562..78128578,+ | |id=chr11:78128562..78128578,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!6.09e-17!9;UBERON:0000019!6.09e-17!9;UBERON:0000047!6.09e-17!9;UBERON:0004088!6.09e-17!9;UBERON:0002104!6.09e-17!9;UBERON:0001456!6.09e-17!9;UBERON:0003072!6.09e-17!9;UBERON:0003071!6.09e-17!9;UBERON:0004128!6.09e-17!9;UBERON:0001444!1.92e-13!11;UBERON:0000020!3.92e-12!12;UBERON:0001032!3.92e-12!12;UBERON:0004456!3.92e-12!12;UBERON:0005085!5.01e-11!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,7.69e-69,9;UBERON:0000019,7.69e-69,9;UBERON:0000047,7.69e-69,9;UBERON:0010312,7.69e-69,9;UBERON:0004088,7.69e-69,9;UBERON:0002104,7.69e-69,9;UBERON:0001456,7.69e-69,9;UBERON:0003072,7.69e-69,9;UBERON:0004128,7.69e-69,9;UBERON:0003071,7.69e-69,9;UBERON:0001444,2.37e-56,11;UBERON:0000020,1.15e-51,12;UBERON:0001032,1.15e-51,12;UBERON:0004456,1.15e-51,12;UBERON:0000033,1.06e-47,13;UBERON:0005085,1.06e-47,13;UBERON:0007811,3.40e-17,36;UBERON:0000153,2.29e-14,43;UBERON:0003056,1.40e-12,49;UBERON:0002346,1.44e-09,64;UBERON:0003075,1.44e-09,64;UBERON:0007284,1.44e-09,64;UBERON:0010371,2.39e-08,73;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0.510749352340751,0.921639199537461,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0.210441855886474,1.69156575851515,4.82794419310293,4.68161537493908,5.72678307775717,2.9255694635071,3.58718416797579,3.27956035959051,7.50239775143145,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0.590440591918409,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0,0,0,0,0,0.354951612318675,0,0.436039249896986,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0.510749352340751,0.921639199537461,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0.210441855886474,1.69156575851515,4.82794419310293,4.68161537493908,5.72678307775717,2.9255694635071,3.58718416797579,3.27956035959051,7.50239775143145,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0.590440591918409,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0,0,0,0,0,0.354951612318675,0,0.436039249896986,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | ||
|short_description=p3@Spag5 | |short_description=p3@Spag5 | ||
}} | }} |
Latest revision as of 17:52, 25 September 2015
Short description: | p3@Spag5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Spag5_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | -280bp_to_ENSMUST00000150016_5end |
EntrezGene: | Spag5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 7.69e-69 | 9 |
camera-type eye | 7.69e-69 | 9 |
simple eye | 7.69e-69 | 9 |
immature eye | 7.69e-69 | 9 |
ocular region | 7.69e-69 | 9 |
visual system | 7.69e-69 | 9 |
face | 7.69e-69 | 9 |
optic cup | 7.69e-69 | 9 |
optic vesicle | 7.69e-69 | 9 |
eye primordium | 7.69e-69 | 9 |
subdivision of head | 2.37e-56 | 11 |
sense organ | 1.15e-51 | 12 |
sensory system | 1.15e-51 | 12 |
entire sense organ system | 1.15e-51 | 12 |
head | 1.06e-47 | 13 |
ectodermal placode | 1.06e-47 | 13 |
craniocervical region | 3.40e-17 | 36 |
anterior region of body | 2.29e-14 | 43 |
pre-chordal neural plate | 1.40e-12 | 49 |
neurectoderm | 1.44e-09 | 64 |
neural plate | 1.44e-09 | 64 |
presumptive neural plate | 1.44e-09 | 64 |
ecto-epithelium | 2.39e-08 | 73 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |