FFCP PHASE1:Mm9::chr11:75229127..75229150,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20317 | |EntrezGene=20317 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=111 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-430bp_to_ENSMUST00000139403_5end | |association_with_transcript=-430bp_to_ENSMUST00000139403_5end | ||
|cluster_id=chr11:75229127..75229150,- | |||
|description=CAGE_peak_4_at_Serpinf1_5end | |description=CAGE_peak_4_at_Serpinf1_5end | ||
|id=chr11:75229127..75229150,- | |id=chr11:75229127..75229150,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.15e-09,5;CL:0000192,1.24e-08,3;CL:0000359,1.24e-08,3;CL:0002539,1.24e-08,3;CL:0000514,1.24e-08,3;CL:0000151,5.43e-08,3;CL:0000499,5.43e-08,3;CL:0000327,5.43e-08,3;CL:0002453,1.59e-07,8;CL:0000128,8.89e-07,6;CL:0000126,8.89e-07,6;CL:0000127,8.89e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.33e-13!22;UBERON:0007499!4.33e-13!22;UBERON:0006925!4.33e-13!22;UBERON:0009497!4.33e-13!22;UBERON:0000015!4.33e-13!22;UBERON:0002423!4.33e-13!22;UBERON:0006235!4.33e-13!22;UBERON:0008835!4.33e-13!22;UBERON:0003894!4.33e-13!22;UBERON:0004161!4.33e-13!22;UBERON:0008836!4.33e-13!22;UBERON:0009854!4.42e-12!23;UBERON:0009856!4.42e-12!23;UBERON:0002365!2.47e-11!25;UBERON:0002330!2.47e-11!25;UBERON:0003914!6.19e-09!47;UBERON:0005256!1.93e-08!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.63e-26,22;UBERON:0007499,1.63e-26,22;UBERON:0006925,1.63e-26,22;UBERON:0009497,1.63e-26,22;UBERON:0000015,1.63e-26,22;UBERON:0002423,1.63e-26,22;UBERON:0006235,1.63e-26,22;UBERON:0008835,1.63e-26,22;UBERON:0003894,1.63e-26,22;UBERON:0004161,1.63e-26,22;UBERON:0008836,1.63e-26,22;UBERON:0009854,3.41e-25,23;UBERON:0009856,3.41e-25,23;UBERON:0002365,7.14e-23,25;UBERON:0002330,7.14e-23,25;UBERON:0005256,2.91e-20,45;UBERON:0003914,3.45e-19,47;UBERON:0003104,1.19e-13,61;UBERON:0009142,1.19e-13,61;UBERON:0005172,1.27e-12,49;UBERON:0005173,1.27e-12,49;UBERON:0002417,1.27e-12,49;UBERON:0000916,1.27e-12,49;UBERON:0000490,3.62e-11,66;UBERON:0003929,1.02e-09,55;UBERON:0001135,1.24e-08,3;UBERON:0004237,1.24e-08,3;UBERON:0004695,1.24e-08,3;UBERON:0002111,1.24e-08,3;UBERON:0004178,1.24e-08,3;UBERON:0002368,1.38e-08,60;UBERON:0000025,2.46e-08,114;UBERON:0009569,2.57e-08,66;UBERON:0002100,1.06e-07,90;UBERON:0002530,1.24e-07,65;UBERON:0004111,2.01e-07,122;UBERON:0005911,5.67e-07,69 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40638862914521,4.66333883609767,2.56965453026354,2.34717403304412,1.30815093828268,4.39372365468944,1.74986909166855,0.55994568650145,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,2.03306719241479,2.66788438833342,0,0,0,1.79760066311043,0.768436610643109,0,0,0.210324961351382,0,0.441737081903227,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,1.72084775396277,8.83962733820076,3.2382191498269,7.14754059192436,4.03224198387602,0.702222100658759,0.852151612890289,0,0.70667914902068,0,0,0,7.11066703153331,0,0,0,3.19714863213368,0,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.883366073841574,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,1.12023300235348,1.24406970610093,0,0.210441855886474,0.390361328888111,0,0.540186389416048,0.150704817835715,0.272145996605311,0.12811372028485,0.187403449119458,0,0.215567992932842,0.378212160335639,0.175951124163949,0.657587197282725,0,0,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0.292399974850665,0.219550115291051,0,0,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0.948339504765408,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,1.48226313543574,0.333690211432188,0.786235980452812,0.224862112384854,0.405720242777006,1.20588579876208,1.01850340712568,3.16465751195892,18.321280625579,0.274561413188081,8.62609239164127,9.67566463938109,2.80833905803104,1.51547326768267,1.25578189465339,12.0610880340842,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0.655739781506702,1.26235463602186,0,0.390438744296638,0.430846795465598,0.477937595905104,0.445597348164788,0,1.21443210502468,0.584511715822624,0.395287777946524,0,0.141940085208269,1.24645922567079,0.651547837414304,0.824850614862677,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0.214337035031592,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,1.13025098687134,0.241251699712623,0.119372344003136,0.328281799490123,0.291480836629851,0.370850604021019,0,0.619160603889667,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.578574190077352,0.26175594198403,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0.419437377702843,0.483168241652012,0.288030006257865,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.347652977834566,1.15745532278223,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.658765662907314,0.169229215783353,0.548783918618318,0.526139422875686,0,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.385813221962283,0.999242311751784,0.233931608445408,1.93383948643468,2.29545998482612,0.441182838239031,0.463735671240843 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40638862914521,4.66333883609767,2.56965453026354,2.34717403304412,1.30815093828268,4.39372365468944,1.74986909166855,0.55994568650145,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,2.03306719241479,2.66788438833342,0,0,0,1.79760066311043,0.768436610643109,0,0,0.210324961351382,0,0.441737081903227,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,1.72084775396277,8.83962733820076,3.2382191498269,7.14754059192436,4.03224198387602,0.702222100658759,0.852151612890289,0,0.70667914902068,0,0,0,7.11066703153331,0,0,0,3.19714863213368,0,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.883366073841574,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,1.12023300235348,1.24406970610093,0,0.210441855886474,0.390361328888111,0,0.540186389416048,0.150704817835715,0.272145996605311,0.12811372028485,0.187403449119458,0,0.215567992932842,0.378212160335639,0.175951124163949,0.657587197282725,0,0,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0.292399974850665,0.219550115291051,0,0,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0.948339504765408,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,1.48226313543574,0.333690211432188,0.786235980452812,0.224862112384854,0.405720242777006,1.20588579876208,1.01850340712568,3.16465751195892,18.321280625579,0.274561413188081,8.62609239164127,9.67566463938109,2.80833905803104,1.51547326768267,1.25578189465339,12.0610880340842,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0.655739781506702,1.26235463602186,0,0.390438744296638,0.430846795465598,0.477937595905104,0.445597348164788,0,1.21443210502468,0.584511715822624,0.395287777946524,0,0.141940085208269,1.24645922567079,0.651547837414304,0.824850614862677,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0.214337035031592,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,1.13025098687134,0.241251699712623,0.119372344003136,0.328281799490123,0.291480836629851,0.370850604021019,0,0.619160603889667,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.578574190077352,0.26175594198403,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0.419437377702843,0.483168241652012,0.288030006257865,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.347652977834566,1.15745532278223,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.658765662907314,0.169229215783353,0.548783918618318,0.526139422875686,0,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.385813221962283,0.999242311751784,0.233931608445408,1.93383948643468,2.29545998482612,0.441182838239031,0.463735671240843 | ||
|short_description=p4@Serpinf1 | |short_description=p4@Serpinf1 | ||
}} | }} |
Latest revision as of 16:07, 25 September 2015
Short description: | p4@Serpinf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Serpinf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:111 |
Association with transcript: | -430bp_to_ENSMUST00000139403_5end |
EntrezGene: | Serpinf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.15e-09 | 5 |
smooth muscle cell | 1.24e-08 | 3 |
vascular associated smooth muscle cell | 1.24e-08 | 3 |
aortic smooth muscle cell | 1.24e-08 | 3 |
smooth muscle myoblast | 1.24e-08 | 3 |
secretory cell | 5.43e-08 | 3 |
stromal cell | 5.43e-08 | 3 |
extracellular matrix secreting cell | 5.43e-08 | 3 |
oligodendrocyte precursor cell | 1.59e-07 | 8 |
oligodendrocyte | 8.89e-07 | 6 |
macroglial cell | 8.89e-07 | 6 |
astrocyte | 8.89e-07 | 6 |