FFCP PHASE1:Mm9::chr11:115854417..115854426,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=192897 | |EntrezGene=192897 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=171bp_to_ENSMUST00000130286_5end | |association_with_transcript=171bp_to_ENSMUST00000130286_5end | ||
|cluster_id=chr11:115854417..115854426,+ | |||
|description=CAGE_peak_12_at_Itgb4_5end | |description=CAGE_peak_12_at_Itgb4_5end | ||
|id=chr11:115854417..115854426,+ | |id=chr11:115854417..115854426,+ | ||
|ontology_enrichment_celltype=CL:0002610!3.15e-10!3;CL:0002614!3.87e-10!3;CL:0000117!4.63e-09!23;CL:0000337!4.63e-09!23;CL:0002319!1.15e-08!43;CL:0000221!2.08e-08!44;CL:0000133!2.08e-08!44;CL:0000055!4.36e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.10e-27,3;CL:0002614,5.70e-27,3;CL:0000117,9.13e-14,23;CL:0000337,9.13e-14,23;CL:0000540,1.46e-09,33;CL:0000047,1.46e-09,33;CL:0000031,1.46e-09,33;CL:0000404,1.46e-09,33;CL:0000393,4.59e-08,39;CL:0000211,4.59e-08,39;CL:0002319,2.69e-07,43;CL:0000221,3.98e-07,44;CL:0000133,3.98e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.54e-19!75;UBERON:0001016!2.54e-19!75;UBERON:0002298!1.95e-18!6;UBERON:0001017!2.64e-18!73;UBERON:0005743!2.64e-18!73;UBERON:0004121!3.54e-14!102;UBERON:0000924!3.54e-14!102;UBERON:0006601!3.54e-14!102;UBERON:0000955!8.52e-14!50;UBERON:0006238!8.52e-14!50;UBERON:0002950!8.96e-13!4;UBERON:0001891!8.96e-13!4;UBERON:0009616!8.96e-13!4;UBERON:0001049!9.62e-13!52;UBERON:0005068!9.62e-13!52;UBERON:0006241!9.62e-13!52;UBERON:0007135!9.62e-13!52;UBERON:0002616!2.03e-12!49;UBERON:0000033!1.30e-11!63;UBERON:0003076!5.39e-11!12;UBERON:0003057!5.39e-11!12;UBERON:0004684!3.15e-10!3;UBERON:0002275!3.15e-10!3;UBERON:0002038!3.87e-10!3;UBERON:0002308!3.87e-10!3;UBERON:0009663!3.87e-10!3;UBERON:0009661!3.87e-10!3;UBERON:0006331!3.87e-10!3;UBERON:0000125!3.87e-10!3;UBERON:0002346!1.43e-09!71;UBERON:0003075!1.43e-09!71;UBERON:0007284!1.43e-09!71;UBERON:0002240!1.26e-07!6;UBERON:0005174!1.26e-07!6;UBERON:0001137!1.26e-07!6;UBERON:0007811!1.89e-07!86;UBERON:0001896!2.74e-07!2;UBERON:0005290!2.74e-07!2;UBERON:0010096!2.74e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,3.10e-27,3;UBERON:0002275,3.10e-27,3;UBERON:0002038,5.70e-27,3;UBERON:0009663,5.70e-27,3;UBERON:0009661,5.70e-27,3;UBERON:0000125,5.70e-27,3;UBERON:0002308,5.70e-27,3;UBERON:0002950,2.00e-20,4;UBERON:0001891,2.00e-20,4;UBERON:0009616,2.00e-20,4;UBERON:0010286,2.00e-20,4;UBERON:0001896,1.59e-18,2;UBERON:0002298,1.59e-18,2;UBERON:0005290,1.59e-18,2;UBERON:0010096,1.59e-18,2;UBERON:0002420,8.50e-18,8;UBERON:0007245,8.50e-18,8;UBERON:0010009,8.50e-18,8;UBERON:0010011,8.50e-18,8;UBERON:0000454,8.50e-18,8;UBERON:0000073,9.40e-13,54;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0001049,5.64e-08,52;UBERON:0005068,5.64e-08,52;UBERON:0006241,5.64e-08,52;UBERON:0007135,5.64e-08,52;UBERON:0003076,3.34e-07,12;UBERON:0003057,3.34e-07,12;UBERON:0004733,8.54e-07,6;UBERON:0004732,8.54e-07,6;UBERON:0002028,8.54e-07,6;UBERON:0007277,8.54e-07,6;UBERON:0002616,9.91e-07,46 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0,0,0,4.40463523997555,1.14918604276669,3.07213066512487,0,0,0,1.3959149950069,2.8138130501584,2.29197371665215,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.599162557619291,1.37250180845588,0,0.521472960576829,0,0.62336413367868,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0,0,0,4.40463523997555,1.14918604276669,3.07213066512487,0,0,0,1.3959149950069,2.8138130501584,2.29197371665215,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.599162557619291,1.37250180845588,0,0.521472960576829,0,0.62336413367868,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@Itgb4 | |short_description=p12@Itgb4 | ||
}} | }} |
Latest revision as of 23:38, 26 September 2015
Short description: | p12@Itgb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Itgb4_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 171bp_to_ENSMUST00000130286_5end |
EntrezGene: | Itgb4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.10e-27 | 3 |
neuron of the substantia nigra | 5.70e-27 | 3 |
CNS neuron (sensu Vertebrata) | 9.13e-14 | 23 |
neuroblast (sensu Vertebrata) | 9.13e-14 | 23 |
neuron | 1.46e-09 | 33 |
neuronal stem cell | 1.46e-09 | 33 |
neuroblast | 1.46e-09 | 33 |
electrically signaling cell | 1.46e-09 | 33 |
electrically responsive cell | 4.59e-08 | 39 |
electrically active cell | 4.59e-08 | 39 |
neural cell | 2.69e-07 | 43 |
ectodermal cell | 3.98e-07 | 44 |
neurectodermal cell | 3.98e-07 | 44 |