FFCP PHASE1:Mm9::chr10:60294182..60294194,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107449 | |EntrezGene=107449 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=638 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K1S3 | |UniProt=Q8K1S3 | ||
|association_with_transcript=134bp_to_ENSMUST00000077925,ENSMUST00000105458,NM_029770,uc007ffe.1,uc007fff.1_5end | |association_with_transcript=134bp_to_ENSMUST00000077925,ENSMUST00000105458,NM_029770,uc007ffe.1,uc007fff.1_5end | ||
|cluster_id=chr10:60294182..60294194,- | |||
|description=CAGE_peak_4_at_Unc5b_5end | |description=CAGE_peak_4_at_Unc5b_5end | ||
|id=chr10:60294182..60294194,- | |id=chr10:60294182..60294194,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.20e-09,6;CL:0000677,1.20e-09,6;CL:0000584,1.20e-09,6;CL:0000066,4.55e-09,25;CL:0000075,4.20e-08,7;CL:0000222,3.65e-07,7;CL:0002076,3.95e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.08e-13,31;UBERON:0001242,5.46e-11,13;UBERON:0001262,5.46e-11,13;UBERON:0004786,5.46e-11,13;UBERON:0005409,6.34e-11,47;UBERON:0000344,3.66e-09,15 | |||
|phase1_expression=1.76163731815273,5.23463111459042,5.45999087267443,10.2837831844322,11.520601788766,1.34303417529512,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.639969691173627,0.45881856213434,5.7423196411502,3.4460959692726,1.29282739611533,3.80046838912748,2.52030129759931,2.21730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,1.25896817975577,0.811015449756117,1.65192076945513,3.9119567217402,0.218025156380447,0,0.194429899074283,0.55994568650145,0,0,0,0,2.82985379639542,2.29226751951005,3.09403255366465,0,0,0,0.677689064138264,0,0.449949858640699,0,0,0.898800331555214,0.768436610643109,0,0.270011876663381,0,0,0,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.638436690425939,1.84327839907492,0.131886287730194,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.30559649555362,0,0.142371680799103,0,0.151452386666368,0.151143120213571,1.73918693221007,0,0,0,0,0,0.140444420131752,2.04516387093669,1.81850203222008,2.47337702157238,0.281686839553361,1.28326477414318,5.09610479413291,7.11066703153331,0.216491041011214,0,0.505524445014783,0.34255163915718,0,0.29688427812965,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.587943535678524,0.251333182659351,1.97755974187499,0.289198713839823,0,0.808834249737046,0.883366073841574,0.969750506270444,3.72783522436244,0.292780797011547,1.04723353406728,1.53274233125155,0,0,0,0.449371918214468,0,0.251308704225729,0.521472960576829,0.255715457330331,0.62336413367868,0.324482526135515,0.611036183101898,0.373220911830279,0.252722758433675,0,0.520481771850815,0.229902104433473,0,0,0.544291993210623,0.2562274405697,0.0937017245597288,0,0,0.378212160335639,0.703804496655795,0.876782929710299,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,1.44988040774851,1.40715635988658,0.540186184383045,1.42046841351126,0.393528463494808,0.462801338662135,1.16266972375204,0.268273401399619,1.63471479314037,0.822799249567402,0.164167464079095,0.810688095458557,0.877199924551994,0,0.805238512562231,0,0,5.28670052774077,0.264450566663544,0.213288250535234,0,0.515469845288373,0.403367049246685,0,1.33157938278791,1.42358718463353,1.31759163779209,0.502670417600539,0.795825888164603,0.974820435595601,3.59527763461689,1.51296634912286,2.19055400579804,0.758671603812327,0.114248512609729,0,0.407302655690628,0,1.33258057791605,0.885311519739602,0,0.156998727841375,0.123397163921801,0.296452627087149,0.333690211432188,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0,0,0.938760993154008,0.837531287209079,0.952174563544055,1.56106918286239,1.26108115284953,2.21464689648775,0.797273843287435,0.983179888294428,1.55416483679306,1.15719246865209,1.50791283939272,0,0,0.551873492609465,1.12385412991454,1.17211686592203,0.655739781506702,1.00988370881749,0,0,0.430846795465598,0.238968797952552,0,0,0.809621403349789,0,0,0,0,0.712262414669021,1.14020871547503,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0.704015124191131,0.63549621259146,0,0.32977250588296,0.807322133479528,0.663442174209714,1.55184047204077,1.96969079694074,1.45740418314925,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0.457556346413045,0.339956859987711,0.279902904647316,0,1.90934123603023,0.316335993581135,0.203319467126849,0.324016022465404,0,0.655087691238533,0.674321731924103,1.1571483801547,1.30877970992015,6.09190374471426,0,0,0.598066184175915,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.469428954583016,0.39061315453185,0.104859344425711,0,0,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0,0,0,0.680191150845634,0.443971906748129,1.16628013592318,1.67884616364078,0.386379188064381,0.563047426353546,0,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0,0.798049746802062,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0.50695859978048,0.377252682772152,0.37456602987953,0.384150914429216,0.287177344778066,0,0.347652977834566,0.192909220463705,0.412085900803307,0.588795680537589,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.507687647350059,0,0.526139422875686,0.135804113845862,0.561142271657738,0.474540072496697,0.689531376628944,0.409231043169689,0,0.964533054905707,0.499621155875892,0.467863216890817,0.644613162144895,1.14772999241306,0.220591419119515,0 | |phase1_expression=1.76163731815273,5.23463111459042,5.45999087267443,10.2837831844322,11.520601788766,1.34303417529512,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.639969691173627,0.45881856213434,5.7423196411502,3.4460959692726,1.29282739611533,3.80046838912748,2.52030129759931,2.21730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,1.25896817975577,0.811015449756117,1.65192076945513,3.9119567217402,0.218025156380447,0,0.194429899074283,0.55994568650145,0,0,0,0,2.82985379639542,2.29226751951005,3.09403255366465,0,0,0,0.677689064138264,0,0.449949858640699,0,0,0.898800331555214,0.768436610643109,0,0.270011876663381,0,0,0,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.638436690425939,1.84327839907492,0.131886287730194,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.30559649555362,0,0.142371680799103,0,0.151452386666368,0.151143120213571,1.73918693221007,0,0,0,0,0,0.140444420131752,2.04516387093669,1.81850203222008,2.47337702157238,0.281686839553361,1.28326477414318,5.09610479413291,7.11066703153331,0.216491041011214,0,0.505524445014783,0.34255163915718,0,0.29688427812965,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.587943535678524,0.251333182659351,1.97755974187499,0.289198713839823,0,0.808834249737046,0.883366073841574,0.969750506270444,3.72783522436244,0.292780797011547,1.04723353406728,1.53274233125155,0,0,0,0.449371918214468,0,0.251308704225729,0.521472960576829,0.255715457330331,0.62336413367868,0.324482526135515,0.611036183101898,0.373220911830279,0.252722758433675,0,0.520481771850815,0.229902104433473,0,0,0.544291993210623,0.2562274405697,0.0937017245597288,0,0,0.378212160335639,0.703804496655795,0.876782929710299,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,1.44988040774851,1.40715635988658,0.540186184383045,1.42046841351126,0.393528463494808,0.462801338662135,1.16266972375204,0.268273401399619,1.63471479314037,0.822799249567402,0.164167464079095,0.810688095458557,0.877199924551994,0,0.805238512562231,0,0,5.28670052774077,0.264450566663544,0.213288250535234,0,0.515469845288373,0.403367049246685,0,1.33157938278791,1.42358718463353,1.31759163779209,0.502670417600539,0.795825888164603,0.974820435595601,3.59527763461689,1.51296634912286,2.19055400579804,0.758671603812327,0.114248512609729,0,0.407302655690628,0,1.33258057791605,0.885311519739602,0,0.156998727841375,0.123397163921801,0.296452627087149,0.333690211432188,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0,0,0.938760993154008,0.837531287209079,0.952174563544055,1.56106918286239,1.26108115284953,2.21464689648775,0.797273843287435,0.983179888294428,1.55416483679306,1.15719246865209,1.50791283939272,0,0,0.551873492609465,1.12385412991454,1.17211686592203,0.655739781506702,1.00988370881749,0,0,0.430846795465598,0.238968797952552,0,0,0.809621403349789,0,0,0,0,0.712262414669021,1.14020871547503,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0.704015124191131,0.63549621259146,0,0.32977250588296,0.807322133479528,0.663442174209714,1.55184047204077,1.96969079694074,1.45740418314925,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0.457556346413045,0.339956859987711,0.279902904647316,0,1.90934123603023,0.316335993581135,0.203319467126849,0.324016022465404,0,0.655087691238533,0.674321731924103,1.1571483801547,1.30877970992015,6.09190374471426,0,0,0.598066184175915,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.469428954583016,0.39061315453185,0.104859344425711,0,0,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0,0,0,0.680191150845634,0.443971906748129,1.16628013592318,1.67884616364078,0.386379188064381,0.563047426353546,0,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0,0.798049746802062,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0.50695859978048,0.377252682772152,0.37456602987953,0.384150914429216,0.287177344778066,0,0.347652977834566,0.192909220463705,0.412085900803307,0.588795680537589,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.507687647350059,0,0.526139422875686,0.135804113845862,0.561142271657738,0.474540072496697,0.689531376628944,0.409231043169689,0,0.964533054905707,0.499621155875892,0.467863216890817,0.644613162144895,1.14772999241306,0.220591419119515,0 | ||
|short_description=p4@Unc5b | |short_description=p4@Unc5b | ||
}} | }} |
Latest revision as of 03:45, 26 September 2015
Short description: | p4@Unc5b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Unc5b_5end |
Coexpression cluster: | MCL_coexpression_mm9:638 |
Association with transcript: | 134bp_to_ENSMUST00000077925, ENSMUST00000105458, NM_029770, uc007ffe.1, uc007fff.1_5end |
EntrezGene: | Unc5b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.20e-09 | 6 |
gut absorptive cell | 1.20e-09 | 6 |
enterocyte | 1.20e-09 | 6 |
epithelial cell | 4.55e-09 | 25 |
columnar/cuboidal epithelial cell | 4.20e-08 | 7 |
mesodermal cell | 3.65e-07 | 7 |
endo-epithelial cell | 3.95e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.08e-13 | 31 |
intestinal mucosa | 5.46e-11 | 13 |
wall of intestine | 5.46e-11 | 13 |
gastrointestinal system mucosa | 5.46e-11 | 13 |
gastrointestinal system | 6.34e-11 | 47 |
mucosa | 3.66e-09 | 15 |