FFCP PHASE1:Mm9::chr10:126601827..126601842,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14421 | |EntrezGene=14421 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VDF0,Q09200,Q3UN35 | |UniProt=Q8VDF0,Q09200,Q3UN35 | ||
|association_with_transcript=-369bp_to_NM_001244617,NM_008080,NR_045166_5end | |association_with_transcript=-369bp_to_NM_001244617,NM_008080,NR_045166_5end | ||
|cluster_id=chr10:126601827..126601842,+ | |||
|description=CAGE_peak_10_at_B4galnt1_5end | |description=CAGE_peak_10_at_B4galnt1_5end | ||
|id=chr10:126601827..126601842,+ | |id=chr10:126601827..126601842,+ | ||
|ontology_enrichment_celltype=CL:0000557!5.20e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.24e-18,7;CL:0000473,1.75e-16,7;CL:0000049,5.47e-12,19;CL:0002194,1.67e-10,4;CL:0000766,1.67e-10,4;CL:0000234,1.67e-10,4;CL:0000576,1.67e-10,4;CL:0000235,1.67e-10,4;CL:0000864,1.67e-10,4;CL:0002009,1.67e-10,4;CL:0000040,1.67e-10,4;CL:0000559,1.67e-10,4;CL:0002092,3.15e-09,3;CL:0002540,3.15e-09,3;CL:0002320,2.83e-08,46;CL:0000134,2.83e-08,46;CL:0000988,1.13e-07,32;CL:0002032,1.13e-07,32;CL:0000037,1.13e-07,32;CL:0000837,1.13e-07,32;CL:0000682,1.36e-07,3;CL:0000763,2.58e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.90e-09,3;DOID:4045,9.90e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001474!3.51e-09!22;UBERON:0004765!3.51e-09!22;UBERON:0001434!3.51e-09!22;UBERON:0002371!4.29e-09!16;UBERON:0002204!5.36e-07!32;UBERON:0002193!6.53e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.27e-15,32;UBERON:0002371,2.54e-15,16;UBERON:0001474,3.86e-15,22;UBERON:0004765,3.86e-15,22;UBERON:0001434,3.86e-15,22;UBERON:0002384,2.83e-08,46 | |||
|phase1_expression=0,2.79180326111489,2.27499619694768,0.60492842261366,0,0.839396359559449,1.86890112476421,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0.607425802169478,0.699561878128147,0.473193248037357,0.685572168028694,0,0.255129870453209,0.893618560807968,1.82839852397255,0.799962113967033,0.68822784320151,2.29692785646008,1.29228598847722,1.29282739611533,0,0.504060259519861,1.33038306393183,0,0,0,0,0.498703936075477,0,6.69650609179052,3.1253413780952,7.32933241563318,9.41170380849623,12.9778642142105,5.82612423637384,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,9.44894703145469,9.88866362566974,7.8152812644071,1.49800055259202,1.53687322128622,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0.445326417194474,0.173485326766136,0,0.230615497256059,0,0,0,0.494389935468748,0.433798070759735,3.5384422077995,0.161766849947409,1.10420759230197,0.484875253135222,0,0,0,0.766371165625774,1.91704199209472,2.39961092397363,2.1601938602421,0,0,0,0,0,0.20778804455956,0.162241263067758,0.203678727700633,0.497627882440372,1.0108910337347,0,0,0,0,0.30140963567143,0,0,0,0,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,9.83098462238529,11.0659600059328,6.81992398549422,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0.134206418760372,0,0,0,0.793351699990633,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0.482354319504834,0.763877555344259,0.287696137450811,0.648540907100142,0.823684239564244,0,0.744281895337007,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0.335012514883631,0,0,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,12.0633027151418,3.80733978673097,0.491764273019036,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0.18542530201051,1.87957968877638,0.619160603889667,1.66675074632741,0.565105371014073,0.820165366326151,0.457556346413045,0.679913719975421,0.419854356970974,0.690999869022119,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,3.94585057078933,0,0,0,0.129159823477731,0,0,0,0,1.20792060413003,3.16833006883652,0,0,0,0,0,0.39736270956253,0.120195449519969,0,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.375364950902364,0.73260649706906,0,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.407412341537585,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.231867835620421 | |phase1_expression=0,2.79180326111489,2.27499619694768,0.60492842261366,0,0.839396359559449,1.86890112476421,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0.607425802169478,0.699561878128147,0.473193248037357,0.685572168028694,0,0.255129870453209,0.893618560807968,1.82839852397255,0.799962113967033,0.68822784320151,2.29692785646008,1.29228598847722,1.29282739611533,0,0.504060259519861,1.33038306393183,0,0,0,0,0.498703936075477,0,6.69650609179052,3.1253413780952,7.32933241563318,9.41170380849623,12.9778642142105,5.82612423637384,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,9.44894703145469,9.88866362566974,7.8152812644071,1.49800055259202,1.53687322128622,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0.445326417194474,0.173485326766136,0,0.230615497256059,0,0,0,0.494389935468748,0.433798070759735,3.5384422077995,0.161766849947409,1.10420759230197,0.484875253135222,0,0,0,0.766371165625774,1.91704199209472,2.39961092397363,2.1601938602421,0,0,0,0,0,0.20778804455956,0.162241263067758,0.203678727700633,0.497627882440372,1.0108910337347,0,0,0,0,0.30140963567143,0,0,0,0,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,9.83098462238529,11.0659600059328,6.81992398549422,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0.134206418760372,0,0,0,0.793351699990633,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0.482354319504834,0.763877555344259,0.287696137450811,0.648540907100142,0.823684239564244,0,0.744281895337007,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0.335012514883631,0,0,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,12.0633027151418,3.80733978673097,0.491764273019036,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0.18542530201051,1.87957968877638,0.619160603889667,1.66675074632741,0.565105371014073,0.820165366326151,0.457556346413045,0.679913719975421,0.419854356970974,0.690999869022119,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,3.94585057078933,0,0,0,0.129159823477731,0,0,0,0,1.20792060413003,3.16833006883652,0,0,0,0,0,0.39736270956253,0.120195449519969,0,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.375364950902364,0.73260649706906,0,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.407412341537585,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.231867835620421 | ||
|short_description=p10@B4galnt1 | |short_description=p10@B4galnt1 | ||
}} | }} |
Latest revision as of 17:23, 25 September 2015
Short description: | p10@B4galnt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_B4galnt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | -369bp_to_NM_001244617, NM_008080, NR_045166_5end |
EntrezGene: | B4galnt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.24e-18 | 7 |
defensive cell | 1.75e-16 | 7 |
common myeloid progenitor | 5.47e-12 | 19 |
monopoietic cell | 1.67e-10 | 4 |
myeloid leukocyte | 1.67e-10 | 4 |
phagocyte | 1.67e-10 | 4 |
monocyte | 1.67e-10 | 4 |
macrophage | 1.67e-10 | 4 |
tissue-resident macrophage | 1.67e-10 | 4 |
macrophage dendritic cell progenitor | 1.67e-10 | 4 |
monoblast | 1.67e-10 | 4 |
promonocyte | 1.67e-10 | 4 |
bone marrow cell | 3.15e-09 | 3 |
mesenchymal stem cell of the bone marrow | 3.15e-09 | 3 |
connective tissue cell | 2.83e-08 | 46 |
mesenchymal cell | 2.83e-08 | 46 |
hematopoietic cell | 1.13e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.13e-07 | 32 |
hematopoietic stem cell | 1.13e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.13e-07 | 32 |
M cell of gut | 1.36e-07 | 3 |
myeloid cell | 2.58e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.27e-15 | 32 |
bone marrow | 2.54e-15 | 16 |
bone element | 3.86e-15 | 22 |
skeletal element | 3.86e-15 | 22 |
skeletal system | 3.86e-15 | 22 |
connective tissue | 2.83e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.90e-09 | 3 |
muscle cancer | 9.90e-09 | 3 |