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FFCP PHASE1:Mm9::chr9:64949111..64949149,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:64949111..64949149,+
|DHSsupport=NA
|short_description=p2@Igdcc4
|DPIdataset=NA
|description=CAGE_peak_2_at_Igdcc4_5end
|association_with_transcript=-143bp_to_ENSMUST00000035499,ENSMUST00000077696_5end
|EntrezGene=56741
|EntrezGene=56741
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=Q9EQS9,E9QAQ0
|UniProt=Q9EQS9,E9QAQ0
|association_with_transcript=-143bp_to_ENSMUST00000035499,ENSMUST00000077696_5end
|cluster_id=chr9:64949111..64949149,+
|description=CAGE_peak_2_at_Igdcc4_5end
|id=chr9:64949111..64949149,+
|ontology_enrichment_celltype=CL:0000117!1.60e-15!23;CL:0000337!1.60e-15!23;CL:0000540!1.91e-13!33;CL:0000047!1.91e-13!33;CL:0000031!1.91e-13!33;CL:0000404!1.91e-13!33;CL:0000221!2.12e-11!44;CL:0000133!2.12e-11!44;CL:0002319!5.09e-11!43;CL:0000393!9.94e-10!39;CL:0000211!9.94e-10!39;CL:0000055!8.68e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.76e-23,23;CL:0000337,1.76e-23,23;CL:0000540,3.09e-15,33;CL:0000047,3.09e-15,33;CL:0000031,3.09e-15,33;CL:0000404,3.09e-15,33;CL:0000221,1.99e-12,44;CL:0000133,1.99e-12,44;CL:0002319,6.97e-12,43;CL:0000393,1.54e-11,39;CL:0000211,1.54e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.08e-21!73;UBERON:0005743!1.08e-21!73;UBERON:0000073!1.78e-20!75;UBERON:0001016!1.78e-20!75;UBERON:0002346!1.83e-20!71;UBERON:0003075!1.83e-20!71;UBERON:0007284!1.83e-20!71;UBERON:0000033!1.84e-20!63;UBERON:0001049!4.34e-19!52;UBERON:0005068!4.34e-19!52;UBERON:0006241!4.34e-19!52;UBERON:0007135!4.34e-19!52;UBERON:0004121!8.37e-19!102;UBERON:0000924!8.37e-19!102;UBERON:0006601!8.37e-19!102;UBERON:0000955!4.02e-17!50;UBERON:0006238!4.02e-17!50;UBERON:0003056!4.75e-17!49;UBERON:0002616!6.38e-17!49;UBERON:0002020!3.44e-14!34;UBERON:0003080!2.92e-13!40;UBERON:0002780!1.03e-12!39;UBERON:0001890!1.03e-12!39;UBERON:0006240!1.03e-12!39;UBERON:0000153!3.12e-11!94;UBERON:0002791!8.48e-11!29;UBERON:0003528!8.48e-11!29;UBERON:0001893!8.48e-11!29;UBERON:0007811!4.19e-10!86;UBERON:0000468!1.15e-08!333;UBERON:0003076!9.53e-07!12;UBERON:0003057!9.53e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.58e-24,64;UBERON:0003075,3.58e-24,64;UBERON:0007284,3.58e-24,64;UBERON:0000073,8.57e-23,54;UBERON:0010371,1.10e-21,73;UBERON:0001049,8.62e-21,52;UBERON:0005068,8.62e-21,52;UBERON:0006241,8.62e-21,52;UBERON:0007135,8.62e-21,52;UBERON:0004121,1.16e-20,95;UBERON:0000924,1.16e-20,95;UBERON:0006601,1.16e-20,95;UBERON:0001017,2.16e-20,73;UBERON:0001016,2.04e-19,75;UBERON:0003056,1.07e-18,49;UBERON:0002020,3.19e-17,34;UBERON:0002616,3.24e-15,46;UBERON:0000955,1.17e-14,47;UBERON:0006238,1.17e-14,47;UBERON:0010314,7.09e-14,92;UBERON:0003080,8.99e-14,40;UBERON:0002780,5.17e-13,39;UBERON:0001890,5.17e-13,39;UBERON:0006240,5.17e-13,39;UBERON:0003528,2.79e-12,29;UBERON:0002791,2.79e-12,29;UBERON:0001893,2.79e-12,29;UBERON:0002420,1.35e-08,8;UBERON:0007245,1.35e-08,8;UBERON:0010009,1.35e-08,8;UBERON:0010011,1.35e-08,8;UBERON:0000454,1.35e-08,8;UBERON:0003076,5.05e-08,12;UBERON:0003057,5.05e-08,12;UBERON:0002240,1.02e-07,6;UBERON:0005174,1.02e-07,6;UBERON:0001137,1.02e-07,6;UBERON:0001948,5.10e-07,5;UBERON:0002315,5.10e-07,5
|phase1_expression=3.04282809499109,0,0,0,0,0.16787927191189,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,4.69434806608824,0.65407546914134,0.219686182734472,0.194429899074283,0.839918529752175,0,0,0,0,0,0,0,5.46254444320914,4.7609188134483,6.33831403506179,0.338844532069132,0,0,0,0,1.49800055259202,0,1.76272340924412,2.29510095163874,1.89292465216244,6.28432165688368,3.75476519617743,2.57230678351403,1.0543001812006,2.75765635983006,3.30347642998166,2.93680877595932,2.76491759861238,6.4624280987795,5.48925861614458,3.64639359389732,3.07101298901519,5.6276261003168,2.29197371665215,8.83885756421003,4.6982654663704,7.45597783301202,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0,0,0.593768556259299,0.693941307064543,0,0.230615497256059,0.452167921657868,0.352766121407114,0.376999773989026,0,0,0,0.647067399789637,0,0.484875253135222,0,1.46390398505774,0.41889341362691,0,0,0,0,2.39665023047716,1.37250180845588,1.7591609295801,1.91206752211504,1.02286182932132,2.0778804455956,1.94689515681309,0.407357455401265,0.248813941220186,0,0.420883711772948,1.30120442962704,2.06911893990126,3.06105620669094,1.50704817835715,2.72145996605311,2.8185018462667,3.18585863503078,1.03481348295606,1.07783996466421,1.89106080167819,1.40760899331159,1.7535658594206,0.556094498451196,0.696504333044333,0.411564272815887,1.39323986772945,0,0,0,0.414251545071004,0.234526059981096,0.900310307305074,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0.493679549740441,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,0.841159794256509,1.3377599609307,0,0,1.06644125267617,1.16118335930219,1.03093969057675,0.605050573870028,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.685491075658373,0,0.407302655690628,0.193952487167626,0.280543279561274,0.126473074248515,0,0,0,0,0.333690211432188,0.393117990226406,0,0,0,0,0.287696137450811,0,0,2.87536413054709,0.744281895337007,0.312037673114561,0,0,0,0,1.13694847062291,0.488894929326078,0.509235257325564,0.704070744865506,0.670025029767263,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0,0,0,0,0,0,0,1.60550589987792,1.64096361229084,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,0.876767573733936,0.790575555893047,0.963963949265421,0.567760340833074,1.78065603667255,1.14020871547503,1.48473110675282,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,1.36175842301515,1.44048875225048,0.517434735131018,1.28602221018955,1.06404140185364,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0,0.968786560175433,0.120625849856312,0,0,0,2.03967832211561,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,0,2.05618395827738,1.42323626988794,0.540026704109006,0.627264888043406,0.436725127492355,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,1.49516546043979,0.330916980914195,1.75006069509643,0.387479470433193,1.18269287843545,1.05621514781179,0.911430693907651,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.616265742988964,0.51968329191118,0.358053391334963,0,0.120195449519969,0,0.100966449948148,0,0.201652370273681,0,0,0,0,0,0,0,0.386379188064381,0.375364950902364,0.915758121336325,0.214368379079066,0,0.564751842617067,0.460325236507177,1.14579102687879,1.20297227640581,1.37016503954128,0.755393897389701,1.35004500046361,1.80128481289688,1.35942722695261,3.10656187051092,0.518936737920883,2.39414924040619,0.853668028770671,2.43106717068294,1.25767897576789,1.65459157605013,1.11123363900808,0.618105171716683,1.28367683836726,1.76888048234658,0.760437899670719,2.45214243801899,1.31098110457835,1.92075457214608,1.14870937911227,0.952587382566147,2.0859178670074,1.54327376370964,0.412085900803307,1.17759136107518,0.342869252385415,0.70990322463735,0.953744759789284,2.0348498328526,1.03520318456864,0.676916863133412,1.09756783723664,0.789209134313529,0.814824683075171,3.36685362994643,1.77952527186261,2.06859412988683,0.409231043169689,2.16911577660352,1.35034627686799,1.74867404556562,1.87145286756327,0.429742108096597,2.10417165275728,0.661774257358546,0.231867835620421
|phase1_expression=3.04282809499109,0,0,0,0,0.16787927191189,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,4.69434806608824,0.65407546914134,0.219686182734472,0.194429899074283,0.839918529752175,0,0,0,0,0,0,0,5.46254444320914,4.7609188134483,6.33831403506179,0.338844532069132,0,0,0,0,1.49800055259202,0,1.76272340924412,2.29510095163874,1.89292465216244,6.28432165688368,3.75476519617743,2.57230678351403,1.0543001812006,2.75765635983006,3.30347642998166,2.93680877595932,2.76491759861238,6.4624280987795,5.48925861614458,3.64639359389732,3.07101298901519,5.6276261003168,2.29197371665215,8.83885756421003,4.6982654663704,7.45597783301202,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0,0,0.593768556259299,0.693941307064543,0,0.230615497256059,0.452167921657868,0.352766121407114,0.376999773989026,0,0,0,0.647067399789637,0,0.484875253135222,0,1.46390398505774,0.41889341362691,0,0,0,0,2.39665023047716,1.37250180845588,1.7591609295801,1.91206752211504,1.02286182932132,2.0778804455956,1.94689515681309,0.407357455401265,0.248813941220186,0,0.420883711772948,1.30120442962704,2.06911893990126,3.06105620669094,1.50704817835715,2.72145996605311,2.8185018462667,3.18585863503078,1.03481348295606,1.07783996466421,1.89106080167819,1.40760899331159,1.7535658594206,0.556094498451196,0.696504333044333,0.411564272815887,1.39323986772945,0,0,0,0.414251545071004,0.234526059981096,0.900310307305074,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0.493679549740441,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,0.841159794256509,1.3377599609307,0,0,1.06644125267617,1.16118335930219,1.03093969057675,0.605050573870028,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.685491075658373,0,0.407302655690628,0.193952487167626,0.280543279561274,0.126473074248515,0,0,0,0,0.333690211432188,0.393117990226406,0,0,0,0,0.287696137450811,0,0,2.87536413054709,0.744281895337007,0.312037673114561,0,0,0,0,1.13694847062291,0.488894929326078,0.509235257325564,0.704070744865506,0.670025029767263,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0,0,0,0,0,0,0,1.60550589987792,1.64096361229084,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,0.876767573733936,0.790575555893047,0.963963949265421,0.567760340833074,1.78065603667255,1.14020871547503,1.48473110675282,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,1.36175842301515,1.44048875225048,0.517434735131018,1.28602221018955,1.06404140185364,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0,0.968786560175433,0.120625849856312,0,0,0,2.03967832211561,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,0,2.05618395827738,1.42323626988794,0.540026704109006,0.627264888043406,0.436725127492355,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,1.49516546043979,0.330916980914195,1.75006069509643,0.387479470433193,1.18269287843545,1.05621514781179,0.911430693907651,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.616265742988964,0.51968329191118,0.358053391334963,0,0.120195449519969,0,0.100966449948148,0,0.201652370273681,0,0,0,0,0,0,0,0.386379188064381,0.375364950902364,0.915758121336325,0.214368379079066,0,0.564751842617067,0.460325236507177,1.14579102687879,1.20297227640581,1.37016503954128,0.755393897389701,1.35004500046361,1.80128481289688,1.35942722695261,3.10656187051092,0.518936737920883,2.39414924040619,0.853668028770671,2.43106717068294,1.25767897576789,1.65459157605013,1.11123363900808,0.618105171716683,1.28367683836726,1.76888048234658,0.760437899670719,2.45214243801899,1.31098110457835,1.92075457214608,1.14870937911227,0.952587382566147,2.0859178670074,1.54327376370964,0.412085900803307,1.17759136107518,0.342869252385415,0.70990322463735,0.953744759789284,2.0348498328526,1.03520318456864,0.676916863133412,1.09756783723664,0.789209134313529,0.814824683075171,3.36685362994643,1.77952527186261,2.06859412988683,0.409231043169689,2.16911577660352,1.35034627686799,1.74867404556562,1.87145286756327,0.429742108096597,2.10417165275728,0.661774257358546,0.231867835620421
|short_description=p2@Igdcc4
}}
}}

Latest revision as of 00:13, 27 September 2015

Short description:p2@Igdcc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Igdcc4_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: -143bp_to_ENSMUST00000035499, ENSMUST00000077696_5end
EntrezGene:Igdcc4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Igdcc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.76e-2323
neuroblast (sensu Vertebrata)1.76e-2323
neuron3.09e-1533
neuronal stem cell3.09e-1533
neuroblast3.09e-1533
electrically signaling cell3.09e-1533
ectodermal cell1.99e-1244
neurectodermal cell1.99e-1244
neural cell6.97e-1243
electrically responsive cell1.54e-1139
electrically active cell1.54e-1139

Uber anatomy
Ontology termp-valuen
neurectoderm3.58e-2464
neural plate3.58e-2464
presumptive neural plate3.58e-2464
regional part of nervous system8.57e-2354
ecto-epithelium1.10e-2173
neural tube8.62e-2152
neural rod8.62e-2152
future spinal cord8.62e-2152
neural keel8.62e-2152
ectoderm-derived structure1.16e-2095
ectoderm1.16e-2095
presumptive ectoderm1.16e-2095
central nervous system2.16e-2073
nervous system2.04e-1975
pre-chordal neural plate1.07e-1849
gray matter3.19e-1734
regional part of brain3.24e-1546
brain1.17e-1447
future brain1.17e-1447
structure with developmental contribution from neural crest7.09e-1492
anterior neural tube8.99e-1440
regional part of forebrain5.17e-1339
forebrain5.17e-1339
future forebrain5.17e-1339
brain grey matter2.79e-1229
regional part of telencephalon2.79e-1229
telencephalon2.79e-1229
basal ganglion1.35e-088
nuclear complex of neuraxis1.35e-088
aggregate regional part of brain1.35e-088
collection of basal ganglia1.35e-088
cerebral subcortex1.35e-088
posterior neural tube5.05e-0812
chordal neural plate5.05e-0812
spinal cord1.02e-076
dorsal region element1.02e-076
dorsum1.02e-076
regional part of spinal cord5.10e-075
gray matter of spinal cord5.10e-075
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