FFCP PHASE1:Mm9::chr9:44128312..44128373,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:44128312..44128373,- to FFCP PHASE1:Mm9::chr9:44128312..44128373,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71764 | |EntrezGene=71764 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=240 | |||
|TSSclassifier=NA | |||
|UniProt=G5E8D9,E9PZE4,Q3U590,Q9DBJ2,Q8CAA2 | |UniProt=G5E8D9,E9PZE4,Q3U590,Q9DBJ2,Q8CAA2 | ||
|association_with_transcript=0bp_to_ENSMUST00000065080,ENSMUST00000085976,NM_027909,uc009pct.1,uc009pcu.1_5end | |||
|cluster_id=chr9:44128312..44128373,- | |||
|description=CAGE_peak_1_at_C2cd2l_5end | |||
|id=chr9:44128312..44128373,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.00e-12!51;UBERON:0000955!4.48e-10!50;UBERON:0006238!4.48e-10!50;UBERON:0000073!1.40e-09!75;UBERON:0001016!1.40e-09!75;UBERON:0002616!1.42e-09!49;UBERON:0001049!3.10e-09!52;UBERON:0005068!3.10e-09!52;UBERON:0006241!3.10e-09!52;UBERON:0007135!3.10e-09!52;UBERON:0001017!4.32e-09!73;UBERON:0005743!4.32e-09!73;UBERON:0000033!1.16e-08!63;UBERON:0004121!1.86e-08!102;UBERON:0000924!1.86e-08!102;UBERON:0006601!1.86e-08!102;UBERON:0002020!1.07e-07!34;UBERON:0002346!2.26e-07!71;UBERON:0003075!2.26e-07!71;UBERON:0007284!2.26e-07!71;UBERON:0002791!2.46e-07!29;UBERON:0003528!2.46e-07!29;UBERON:0001893!2.46e-07!29;UBERON:0000480!3.38e-07!308;UBERON:0000467!3.38e-07!308;UBERON:0003080!4.41e-07!40;UBERON:0002021!5.88e-07!10;UBERON:0000411!5.88e-07!10;UBERON:0001950!5.88e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.12e-13,194;UBERON:0007023,5.00e-12,51;UBERON:0000073,4.76e-10,54;UBERON:0001016,1.40e-09,75;UBERON:0001049,3.10e-09,52;UBERON:0005068,3.10e-09,52;UBERON:0006241,3.10e-09,52;UBERON:0007135,3.10e-09,52;UBERON:0001017,4.32e-09,73;UBERON:0000955,6.15e-09,47;UBERON:0006238,6.15e-09,47;UBERON:0004121,1.03e-08,95;UBERON:0000924,1.03e-08,95;UBERON:0006601,1.03e-08,95;UBERON:0002616,1.87e-08,46;UBERON:0000160,4.54e-08,31;UBERON:0002346,8.68e-08,64;UBERON:0003075,8.68e-08,64;UBERON:0007284,8.68e-08,64;UBERON:0002020,1.07e-07,34;UBERON:0003528,2.46e-07,29;UBERON:0002791,2.46e-07,29;UBERON:0001893,2.46e-07,29;UBERON:0003080,4.41e-07,40;UBERON:0002021,5.88e-07,10;UBERON:0000411,5.88e-07,10;UBERON:0001950,5.88e-07,10;UBERON:0010371,7.92e-07,73 | |||
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| ||
|short_description=p1@C2cd2l | |||
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Latest revision as of 16:46, 26 September 2015
Short description: | p1@C2cd2l |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C2cd2l_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | 0bp_to_ENSMUST00000065080, ENSMUST00000085976, NM_027909, uc009pct.1, uc009pcu.1_5end |
EntrezGene: | C2cd2l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.12e-13 | 194 |
adult organism | 5.00e-12 | 51 |
regional part of nervous system | 4.76e-10 | 54 |
nervous system | 1.40e-09 | 75 |
neural tube | 3.10e-09 | 52 |
neural rod | 3.10e-09 | 52 |
future spinal cord | 3.10e-09 | 52 |
neural keel | 3.10e-09 | 52 |
central nervous system | 4.32e-09 | 73 |
brain | 6.15e-09 | 47 |
future brain | 6.15e-09 | 47 |
ectoderm-derived structure | 1.03e-08 | 95 |
ectoderm | 1.03e-08 | 95 |
presumptive ectoderm | 1.03e-08 | 95 |
regional part of brain | 1.87e-08 | 46 |
intestine | 4.54e-08 | 31 |
neurectoderm | 8.68e-08 | 64 |
neural plate | 8.68e-08 | 64 |
presumptive neural plate | 8.68e-08 | 64 |
gray matter | 1.07e-07 | 34 |
brain grey matter | 2.46e-07 | 29 |
regional part of telencephalon | 2.46e-07 | 29 |
telencephalon | 2.46e-07 | 29 |
anterior neural tube | 4.41e-07 | 40 |
occipital lobe | 5.88e-07 | 10 |
visual cortex | 5.88e-07 | 10 |
neocortex | 5.88e-07 | 10 |
ecto-epithelium | 7.92e-07 | 73 |