FFCP PHASE1:Mm9::chr9:106105439..106105502,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:106105439..106105502,+ to FFCP PHASE1:Mm9::chr9:106105439..106105502,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=23999 | |EntrezGene=23999 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0P5 | |UniProt=Q9Z0P5 | ||
|association_with_transcript=0bp_to_ENSMUST00000024047,NM_011876,uc009rjf.1_5end | |||
|cluster_id=chr9:106105439..106105502,+ | |||
|description=CAGE_peak_1_at_Twf2_5end | |||
|id=chr9:106105439..106105502,+ | |||
|ontology_enrichment_celltype=CL:0000219!5.18e-09!54;CL:0000988!6.08e-08!32;CL:0002032!6.08e-08!32;CL:0000037!6.08e-08!32;CL:0000566!6.08e-08!32;CL:0000837!6.08e-08!32;CL:0002320!3.56e-07!46;CL:0000134!3.56e-07!46;CL:0000738!5.86e-07!17;CL:0002087!5.86e-07!17;CL:0000034!8.98e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,5.18e-09,54;CL:0000988,6.05e-08,32;CL:0002032,6.05e-08,32;CL:0000037,6.05e-08,32;CL:0000837,6.05e-08,32;CL:0002320,3.56e-07,46;CL:0000134,3.56e-07,46;CL:0000738,5.86e-07,17;CL:0002087,5.86e-07,17;CL:0000034,8.98e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.48e-13,48;UBERON:0002405,2.48e-13,48;UBERON:0002390,8.59e-13,45;UBERON:0003061,8.59e-13,45;UBERON:0000926,1.41e-09,120;UBERON:0004120,1.41e-09,120;UBERON:0006603,1.41e-09,120;UBERON:0000073,2.62e-08,54;UBERON:0001049,5.59e-08,52;UBERON:0005068,5.59e-08,52;UBERON:0006241,5.59e-08,52;UBERON:0007135,5.59e-08,52;UBERON:0003528,5.94e-08,29;UBERON:0002791,5.94e-08,29;UBERON:0001893,5.94e-08,29;UBERON:0002616,6.89e-08,46;UBERON:0002020,7.07e-08,34;UBERON:0002780,1.08e-07,39;UBERON:0001890,1.08e-07,39;UBERON:0006240,1.08e-07,39;UBERON:0003080,1.24e-07,40;UBERON:0000955,1.73e-07,47;UBERON:0006238,1.73e-07,47;UBERON:0000956,2.67e-07,21;UBERON:0001869,2.67e-07,21;UBERON:0000203,2.67e-07,21;UBERON:0004177,3.08e-07,29;UBERON:0005057,3.08e-07,29;UBERON:0002384,3.56e-07,46;UBERON:0003081,4.25e-07,87;UBERON:0001474,4.63e-07,22;UBERON:0004765,4.63e-07,22;UBERON:0001434,4.63e-07,22;UBERON:0001017,5.69e-07,73;UBERON:0001016,7.36e-07,75;UBERON:0002371,9.34e-07,16 | |||
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| ||
|short_description=p1@Twf2 | |||
}} | }} |
Latest revision as of 02:42, 26 September 2015
Short description: | p1@Twf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Twf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | 0bp_to_ENSMUST00000024047, NM_011876, uc009rjf.1_5end |
EntrezGene: | Twf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 5.18e-09 | 54 |
hematopoietic cell | 6.05e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.05e-08 | 32 |
hematopoietic stem cell | 6.05e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.05e-08 | 32 |
connective tissue cell | 3.56e-07 | 46 |
mesenchymal cell | 3.56e-07 | 46 |
leukocyte | 5.86e-07 | 17 |
nongranular leukocyte | 5.86e-07 | 17 |
stem cell | 8.98e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.48e-13 | 48 |
immune system | 2.48e-13 | 48 |
hematopoietic system | 8.59e-13 | 45 |
blood island | 8.59e-13 | 45 |
mesoderm | 1.41e-09 | 120 |
mesoderm-derived structure | 1.41e-09 | 120 |
presumptive mesoderm | 1.41e-09 | 120 |
regional part of nervous system | 2.62e-08 | 54 |
neural tube | 5.59e-08 | 52 |
neural rod | 5.59e-08 | 52 |
future spinal cord | 5.59e-08 | 52 |
neural keel | 5.59e-08 | 52 |
brain grey matter | 5.94e-08 | 29 |
regional part of telencephalon | 5.94e-08 | 29 |
telencephalon | 5.94e-08 | 29 |
regional part of brain | 6.89e-08 | 46 |
gray matter | 7.07e-08 | 34 |
regional part of forebrain | 1.08e-07 | 39 |
forebrain | 1.08e-07 | 39 |
future forebrain | 1.08e-07 | 39 |
anterior neural tube | 1.24e-07 | 40 |
brain | 1.73e-07 | 47 |
future brain | 1.73e-07 | 47 |
cerebral cortex | 2.67e-07 | 21 |
cerebral hemisphere | 2.67e-07 | 21 |
pallium | 2.67e-07 | 21 |
hemopoietic organ | 3.08e-07 | 29 |
immune organ | 3.08e-07 | 29 |
connective tissue | 3.56e-07 | 46 |
lateral plate mesoderm | 4.25e-07 | 87 |
bone element | 4.63e-07 | 22 |
skeletal element | 4.63e-07 | 22 |
skeletal system | 4.63e-07 | 22 |
central nervous system | 5.69e-07 | 73 |
nervous system | 7.36e-07 | 75 |
bone marrow | 9.34e-07 | 16 |