FFCP PHASE1:Mm9::chr7:19152667..19152694,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr7:19152667..19152694,- to FFCP PHASE1:Mm9::chr7:19152667..19152694,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=545925 | |EntrezGene=545925 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=31 | |||
|TSSclassifier=NA | |||
|UniProt=Q497W2 | |UniProt=Q497W2 | ||
|association_with_transcript=-13bp_to_ENSMUST00000094794,NM_001037168,uc009fjn.1_5end | |||
|cluster_id=chr7:19152667..19152694,- | |||
|description=CAGE_peak_1_at_Psg27_5end | |||
|id=chr7:19152667..19152694,- | |||
|ontology_enrichment_celltype=CL:0000473!3.66e-16!3;CL:0000627!3.66e-16!3;CL:0000682!3.66e-16!3;CL:0000239!6.61e-14!6;CL:0000677!6.61e-14!6;CL:0000212!6.61e-14!6;CL:0000584!6.61e-14!6;CL:0000075!6.02e-12!7;CL:0000066!2.14e-09!25;CL:0002563!2.51e-09!9;CL:0002251!2.51e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.59e-23,3;CL:0000239,5.92e-20,6;CL:0000677,5.92e-20,6;CL:0000584,5.92e-20,6;CL:0000075,3.69e-17,7;CL:0000066,4.07e-14,25;CL:0002563,2.01e-13,9;CL:0002251,2.01e-13,9;CL:0000473,3.25e-10,7;CL:0002076,3.66e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.15e-19!24;UBERON:0005631!7.32e-16!3;UBERON:0000478!7.32e-16!3;UBERON:0000158!7.32e-16!3;UBERON:0000344!8.46e-16!15;UBERON:0005795!8.88e-12!4;UBERON:0000995!8.88e-12!4;UBERON:0001987!3.90e-11!2;UBERON:0003124!3.90e-11!2;UBERON:0004340!3.90e-11!2;UBERON:0001962!6.17e-11!2;UBERON:0001961!6.17e-11!2;UBERON:0001744!6.17e-11!2;UBERON:0001242!1.22e-09!13;UBERON:0000060!1.22e-09!13;UBERON:0001262!1.22e-09!13;UBERON:0004786!1.22e-09!13;UBERON:0003975!1.59e-09!5;UBERON:0003350!2.51e-09!9;UBERON:0004808!2.51e-09!9;UBERON:0001277!2.51e-09!9;UBERON:0000485!1.18e-07!11;UBERON:0002465!1.42e-07!3;UBERON:0003133!8.73e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,6.19e-24,24;UBERON:0000344,3.00e-23,15;UBERON:0001962,2.64e-15,2;UBERON:0001961,2.64e-15,2;UBERON:0001744,2.64e-15,2;UBERON:0001242,4.64e-14,13;UBERON:0001262,4.64e-14,13;UBERON:0004786,4.64e-14,13;UBERON:0003350,2.01e-13,9;UBERON:0004808,2.01e-13,9;UBERON:0001277,2.01e-13,9;UBERON:0000485,4.87e-11,11;UBERON:0005631,5.17e-11,3;UBERON:0000478,5.17e-11,3;UBERON:0000158,5.17e-11,3;UBERON:0002465,1.59e-10,3;UBERON:0000305,1.24e-08,1;UBERON:0003199,1.47e-08,1 | |||
|phase1_expression=0,16.7508195666893,18.654968814971,0,0,3.3575854382378,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,4.81759490241057,13.2073351746455,15.5074318617267,13.1437451938392,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3821886448437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,68.6335909598777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,16.7508195666893,18.654968814971,0,0,3.3575854382378,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,4.81759490241057,13.2073351746455,15.5074318617267,13.1437451938392,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3821886448437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,68.6335909598777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Psg27 | |||
}} | }} |
Latest revision as of 07:47, 26 September 2015
Short description: | p1@Psg27 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Psg27_5end |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | -13bp_to_ENSMUST00000094794, NM_001037168, uc009fjn.1_5end |
EntrezGene: | Psg27 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.59e-23 | 3 |
brush border epithelial cell | 5.92e-20 | 6 |
gut absorptive cell | 5.92e-20 | 6 |
enterocyte | 5.92e-20 | 6 |
columnar/cuboidal epithelial cell | 3.69e-17 | 7 |
epithelial cell | 4.07e-14 | 25 |
intestinal epithelial cell | 2.01e-13 | 9 |
epithelial cell of alimentary canal | 2.01e-13 | 9 |
defensive cell | 3.25e-10 | 7 |
endo-epithelial cell | 3.66e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 6.19e-24 | 24 |
mucosa | 3.00e-23 | 15 |
gut-associated lymphoid tissue | 2.64e-15 | 2 |
mucosa-associated lymphoid tissue | 2.64e-15 | 2 |
lymphoid tissue | 2.64e-15 | 2 |
intestinal mucosa | 4.64e-14 | 13 |
wall of intestine | 4.64e-14 | 13 |
gastrointestinal system mucosa | 4.64e-14 | 13 |
epithelium of mucosa | 2.01e-13 | 9 |
gastrointestinal system epithelium | 2.01e-13 | 9 |
intestinal epithelium | 2.01e-13 | 9 |
simple columnar epithelium | 4.87e-11 | 11 |
extraembryonic membrane | 5.17e-11 | 3 |
extraembryonic structure | 5.17e-11 | 3 |
membranous layer | 5.17e-11 | 3 |
lymphoid system | 1.59e-10 | 3 |
amnion | 1.24e-08 | 1 |
egg chamber | 1.47e-08 | 1 |