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FFCP PHASE1:Mm9::chr6:50211742..50211787,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:50211742..50211787,-
|DHSsupport=NA
|short_description=p1@Dfna5
|DPIdataset=NA
|description=CAGE_peak_1_at_Dfna5_5end
|association_with_transcript=0bp_to_ENSMUST00000163244,ENSMUST00000165099,ENSMUST00000170142,NM_018769_5end
|EntrezGene=54722
|EntrezGene=54722
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=D3YYP5,E9Q5V3,Q9Z2D3
|UniProt=D3YYP5,E9Q5V3,Q9Z2D3
|association_with_transcript=0bp_to_ENSMUST00000163244,ENSMUST00000165099,ENSMUST00000170142,NM_018769_5end
|cluster_id=chr6:50211742..50211787,-
|description=CAGE_peak_1_at_Dfna5_5end
|id=chr6:50211742..50211787,-
|ontology_enrichment_celltype=CL:0000117!2.65e-08!23;CL:0000337!2.65e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.07e-09,23;CL:0000337,3.07e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.49e-09!52;UBERON:0005068!1.49e-09!52;UBERON:0006241!1.49e-09!52;UBERON:0007135!1.49e-09!52;UBERON:0000955!5.09e-09!50;UBERON:0006238!5.09e-09!50;UBERON:0001017!8.92e-09!73;UBERON:0005743!8.92e-09!73;UBERON:0002616!1.02e-08!49;UBERON:0002020!4.55e-08!34;UBERON:0000344!5.63e-08!15;UBERON:0000073!6.15e-08!75;UBERON:0001016!6.15e-08!75;UBERON:0000033!1.35e-07!63;UBERON:0002346!4.09e-07!71;UBERON:0003075!4.09e-07!71;UBERON:0007284!4.09e-07!71;UBERON:0003056!8.00e-07!49;UBERON:0001242!9.26e-07!13;UBERON:0000060!9.26e-07!13;UBERON:0001262!9.26e-07!13;UBERON:0004786!9.26e-07!13;UBERON:0003080!9.78e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.84e-14,31;UBERON:0000073,1.14e-10,54;UBERON:0001049,7.98e-10,52;UBERON:0005068,7.98e-10,52;UBERON:0006241,7.98e-10,52;UBERON:0007135,7.98e-10,52;UBERON:0002020,6.30e-09,34;UBERON:0000344,7.24e-09,15;UBERON:0002346,1.30e-08,64;UBERON:0003075,1.30e-08,64;UBERON:0007284,1.30e-08,64;UBERON:0005409,1.54e-08,47;UBERON:0000955,4.76e-08,47;UBERON:0006238,4.76e-08,47;UBERON:0001017,9.82e-08,73;UBERON:0002616,9.94e-08,46;UBERON:0001242,1.74e-07,13;UBERON:0001262,1.74e-07,13;UBERON:0004786,1.74e-07,13;UBERON:0003528,3.75e-07,29;UBERON:0002791,3.75e-07,29;UBERON:0001893,3.75e-07,29;UBERON:0003056,4.43e-07,49;UBERON:0001016,4.51e-07,75;UBERON:0003080,5.46e-07,40
|phase1_expression=1.12104192973356,15.3549179361319,19.1099680543605,13.6108895088074,11.0197060588196,7.72244650794693,8.64366770203445,0,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.315462165358238,0.548457734422955,1.27316895539409,0.850432901510698,0,0,15.359272588167,34.8702107222098,24.1177424928308,13.3536218809313,14.2211013572687,92.1613584363413,42.3410617996684,53.880514089239,0,0,0,1.1554064790051,2.1610503896604,1.02084678131185,69.8947823330636,41.4107732597614,81.1461803159387,88.8229546926832,79.2332762551797,73.3120633077042,1.88845226963366,0.811015449756117,0.734187008646726,0.782391344348039,0.436050312760893,0.878744730937887,2.13872888981712,1.25987779462826,0,0,0,0,0.257259436035947,0,0,3.64169629547276,3.1739458756322,3.1691570175309,0.677689064138264,1.77858959222228,0,0,2.1314403448383,0.299600110518405,1.15265491596466,1.8664130215526,1.21505344498522,1.89292465216244,2.57085885963423,1.32521124570968,2.08234358665422,2.20444583341944,4.5960939330501,4.40463523997555,3.31987079021488,3.22573719838111,2.63772575460388,3.65950574409639,4.16730696445408,5.58365998002762,2.25105044012672,3.20876320331301,4.12480019663135,5.41012387036591,5.96478226640962,0.227178579999552,0.151143120213571,0.869593466105033,0,0,1.61910957491345,0,0,2.66844398250329,3.2381761289831,1.81850203222008,1.06001872353102,0.281686839553361,2.56652954828636,0,0,0.216491041011214,0,0.505524445014783,3.9964357901671,0.258937883647172,0.742210695324124,0.520455980298408,0,0.691846491768175,0.452167921657868,0.352766121407114,0.753999547978053,0.247194967734374,0.578397427679647,5.30766331169925,0.647067399789637,2.65009822152472,0.969750506270444,3.72783522436244,4.68449275218475,3.97948742945565,19.9256503062701,0.11981512450592,1.19980546198682,0.508280908292259,5.09288173976397,2.74500361691176,6.40837195775608,1.21677024134594,3.06858548796397,3.1168206683934,2.10913641988085,0.916554274652847,3.11017426525233,0.252722758433675,0,2.08192708740326,2.5289231487682,0.900310649026746,1.50704817835715,1.42876648217788,2.0498195245576,1.40552586839593,1.29351685369508,1.5089759505299,1.89106080167819,1.05570674498369,1.31517439456545,0.556094498451196,0.696504333044333,1.4404749548556,1.39323986772945,0,0.51469581422943,0.568326998791185,0.621377317606506,0.703578179943289,1.08037236876609,0.710234206755631,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0,1.09775057645525,0.134206418760372,1.47202963994889,3.19004298375782,5.28670052774077,2.11560453330835,1.70630600428187,1.39342003116263,1.15980715189884,1.00841762311671,2.2237804384487,3.80451252225118,11.3886974770683,11.0348299665087,4.02136334080431,5.57078121715222,6.04388670069272,16.178749355776,9.07779809473716,14.7364542208232,1.13800740571849,1.71372768914593,2.25415471346161,1.4255592949172,2.90928730751439,1.68325967736765,1.58091342810643,1.77132177575523,2.66897837330337,4.19550357334122,0.592905254174298,0.500535317148282,0.589676985339609,0.899448449539415,1.01430060694251,1.20588579876208,0.763877555344259,2.5892652370573,0.648540907100142,2.47105271869273,1.43768206527355,1.48856379067401,1.24815069245824,2.27320990152401,1.79397413521912,0.964887042726734,0.554259570499814,0.757965647081939,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0,0.327726629431476,0,0.289298117163023,4.52373851817817,0.54390568381871,0,0.275936746304732,3.85321415970701,4.92289083687253,1.47541450839008,1.00988370881749,0.94652465824877,0.780877488593277,0.861693590931196,0.955875191810208,0.445597348164788,0.283076530788832,0.809621403349789,0.584511715822624,0.790575555893047,2.89189184779626,0.851640511249612,1.06839362200353,0.162886959353576,0.989820737835213,0,0.728341908464944,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,1.29214146584111,0.727067458955011,0.712994756769443,0.632073515871632,0,0,1.36175842301515,1.62054984628179,1.29358683782755,1.92903331528433,0.532020700926821,1.24858172321449,0.987294123612726,0.304464949114599,1.64270195644597,0.21183207086382,1.10264199027481,0.49465875882444,0.161464426695906,0.72375509913787,0.358117032009409,0.820704498725306,17.488850197791,3.33765543618917,1.02522528478712,2.06386867963222,4.07427960213366,1.13021074202815,0.136694227721025,0.228778173206523,0.509935289981566,0.559805809294632,0.414599921413271,0,1.58167996790568,0.609958401380546,0.540026704109006,0,0.436725127492355,0.404593039154462,0.578574190077352,0,2.98114438571124,0,0,0.747582730219894,0.827292452285488,0.777804753376191,0.904118764344118,0.506868376472335,0.821500670520278,0.2604087696879,0.209718688851422,0,0.576060012515731,0.632022241256357,1.21635129174099,1.02710957164827,0.25984164595559,0.358053391334963,0.993406773906324,0.360586348559907,0.295379054349154,0,0.15241361331,0.100826185136841,0.0974578807397524,0.192423683280659,0.5843845109078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|phase1_expression=1.12104192973356,15.3549179361319,19.1099680543605,13.6108895088074,11.0197060588196,7.72244650794693,8.64366770203445,0,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.315462165358238,0.548457734422955,1.27316895539409,0.850432901510698,0,0,15.359272588167,34.8702107222098,24.1177424928308,13.3536218809313,14.2211013572687,92.1613584363413,42.3410617996684,53.880514089239,0,0,0,1.1554064790051,2.1610503896604,1.02084678131185,69.8947823330636,41.4107732597614,81.1461803159387,88.8229546926832,79.2332762551797,73.3120633077042,1.88845226963366,0.811015449756117,0.734187008646726,0.782391344348039,0.436050312760893,0.878744730937887,2.13872888981712,1.25987779462826,0,0,0,0,0.257259436035947,0,0,3.64169629547276,3.1739458756322,3.1691570175309,0.677689064138264,1.77858959222228,0,0,2.1314403448383,0.299600110518405,1.15265491596466,1.8664130215526,1.21505344498522,1.89292465216244,2.57085885963423,1.32521124570968,2.08234358665422,2.20444583341944,4.5960939330501,4.40463523997555,3.31987079021488,3.22573719838111,2.63772575460388,3.65950574409639,4.16730696445408,5.58365998002762,2.25105044012672,3.20876320331301,4.12480019663135,5.41012387036591,5.96478226640962,0.227178579999552,0.151143120213571,0.869593466105033,0,0,1.61910957491345,0,0,2.66844398250329,3.2381761289831,1.81850203222008,1.06001872353102,0.281686839553361,2.56652954828636,0,0,0.216491041011214,0,0.505524445014783,3.9964357901671,0.258937883647172,0.742210695324124,0.520455980298408,0,0.691846491768175,0.452167921657868,0.352766121407114,0.753999547978053,0.247194967734374,0.578397427679647,5.30766331169925,0.647067399789637,2.65009822152472,0.969750506270444,3.72783522436244,4.68449275218475,3.97948742945565,19.9256503062701,0.11981512450592,1.19980546198682,0.508280908292259,5.09288173976397,2.74500361691176,6.40837195775608,1.21677024134594,3.06858548796397,3.1168206683934,2.10913641988085,0.916554274652847,3.11017426525233,0.252722758433675,0,2.08192708740326,2.5289231487682,0.900310649026746,1.50704817835715,1.42876648217788,2.0498195245576,1.40552586839593,1.29351685369508,1.5089759505299,1.89106080167819,1.05570674498369,1.31517439456545,0.556094498451196,0.696504333044333,1.4404749548556,1.39323986772945,0,0.51469581422943,0.568326998791185,0.621377317606506,0.703578179943289,1.08037236876609,0.710234206755631,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0,1.09775057645525,0.134206418760372,1.47202963994889,3.19004298375782,5.28670052774077,2.11560453330835,1.70630600428187,1.39342003116263,1.15980715189884,1.00841762311671,2.2237804384487,3.80451252225118,11.3886974770683,11.0348299665087,4.02136334080431,5.57078121715222,6.04388670069272,16.178749355776,9.07779809473716,14.7364542208232,1.13800740571849,1.71372768914593,2.25415471346161,1.4255592949172,2.90928730751439,1.68325967736765,1.58091342810643,1.77132177575523,2.66897837330337,4.19550357334122,0.592905254174298,0.500535317148282,0.589676985339609,0.899448449539415,1.01430060694251,1.20588579876208,0.763877555344259,2.5892652370573,0.648540907100142,2.47105271869273,1.43768206527355,1.48856379067401,1.24815069245824,2.27320990152401,1.79397413521912,0.964887042726734,0.554259570499814,0.757965647081939,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0,0.327726629431476,0,0.289298117163023,4.52373851817817,0.54390568381871,0,0.275936746304732,3.85321415970701,4.92289083687253,1.47541450839008,1.00988370881749,0.94652465824877,0.780877488593277,0.861693590931196,0.955875191810208,0.445597348164788,0.283076530788832,0.809621403349789,0.584511715822624,0.790575555893047,2.89189184779626,0.851640511249612,1.06839362200353,0.162886959353576,0.989820737835213,0,0.728341908464944,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,1.29214146584111,0.727067458955011,0.712994756769443,0.632073515871632,0,0,1.36175842301515,1.62054984628179,1.29358683782755,1.92903331528433,0.532020700926821,1.24858172321449,0.987294123612726,0.304464949114599,1.64270195644597,0.21183207086382,1.10264199027481,0.49465875882444,0.161464426695906,0.72375509913787,0.358117032009409,0.820704498725306,17.488850197791,3.33765543618917,1.02522528478712,2.06386867963222,4.07427960213366,1.13021074202815,0.136694227721025,0.228778173206523,0.509935289981566,0.559805809294632,0.414599921413271,0,1.58167996790568,0.609958401380546,0.540026704109006,0,0.436725127492355,0.404593039154462,0.578574190077352,0,2.98114438571124,0,0,0.747582730219894,0.827292452285488,0.777804753376191,0.904118764344118,0.506868376472335,0.821500670520278,0.2604087696879,0.209718688851422,0,0.576060012515731,0.632022241256357,1.21635129174099,1.02710957164827,0.25984164595559,0.358053391334963,0.993406773906324,0.360586348559907,0.295379054349154,0,0.15241361331,0.100826185136841,0.0974578807397524,0.192423683280659,0.5843845109078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|short_description=p1@Dfna5
}}
}}

Latest revision as of 12:17, 1 October 2015

Short description:p1@Dfna5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dfna5_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000163244, ENSMUST00000165099, ENSMUST00000170142, NM_018769_5end
EntrezGene:Dfna5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dfna5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I515.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I619.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.61
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D234.87
GP2+ M cell, pool1.CNhs13228.11845-124H924.12
GP2+ M cell, pool2.CNhs13231.11846-124I113.35
GP2+ M cell, pool3.CNhs13240.11847-124I214.22
Ileum epithelium, pool1.CNhs13199.10252-104B992.16
Ileum epithelium, pool2.CNhs13232.10253-104C142.34
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C853.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G869.89
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H141.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H381.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G988.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H279.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H473.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H719.93
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F16.41
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D111.39
intestine, neonate N01.CNhs11192.1322-23E911.03
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A56.04
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E39.08
intestine, neonate N30.CNhs11131.1384-42G114.74
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D51.58
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H14.20
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I117.49
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.07e-0923
neuroblast (sensu Vertebrata)3.07e-0923

Uber anatomy
Ontology termp-valuen
intestine1.84e-1431
regional part of nervous system1.14e-1054
neural tube7.98e-1052
neural rod7.98e-1052
future spinal cord7.98e-1052
neural keel7.98e-1052
gray matter6.30e-0934
mucosa7.24e-0915
neurectoderm1.30e-0864
neural plate1.30e-0864
presumptive neural plate1.30e-0864
gastrointestinal system1.54e-0847
brain4.76e-0847
future brain4.76e-0847
central nervous system9.82e-0873
regional part of brain9.94e-0846
intestinal mucosa1.74e-0713
wall of intestine1.74e-0713
gastrointestinal system mucosa1.74e-0713
brain grey matter3.75e-0729
regional part of telencephalon3.75e-0729
telencephalon3.75e-0729
pre-chordal neural plate4.43e-0749
nervous system4.51e-0775
anterior neural tube5.46e-0740
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