FFCP PHASE1:Mm9::chr5:137970335..137970343,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14693 | |EntrezGene=14693 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-187bp_to_ENSMUST00000167225_5end | |||
|cluster_id=chr5:137970335..137970343,- | |||
|description=CAGE_peak_16_at_Gnb2_5end | |||
|id=chr5:137970335..137970343,- | |||
|ontology_enrichment_celltype=CL:0002371!6.28e-09!118;CL:0000548!1.53e-08!115;CL:0000004!1.53e-08!115;CL:0000255!1.53e-08!115;CL:0000055!1.91e-08!50;CL:0000723!2.14e-08!91;CL:0000048!2.14e-08!91;CL:0000144!2.80e-08!121;CL:0000012!2.80e-08!121;CL:0000034!1.34e-07!97;CL:0002319!1.35e-07!43;CL:0000221!4.10e-07!44;CL:0000133!4.10e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,4.11e-16,3;CL:0002540,4.11e-16,3;CL:0002194,4.13e-12,4;CL:0000766,4.13e-12,4;CL:0000234,4.13e-12,4;CL:0000576,4.13e-12,4;CL:0000235,4.13e-12,4;CL:0000864,4.13e-12,4;CL:0002009,4.13e-12,4;CL:0000040,4.13e-12,4;CL:0000559,4.13e-12,4;CL:0000878,4.91e-11,2;CL:0000129,4.91e-11,2;CL:0002603,5.51e-11,2;CL:0002453,2.79e-10,8;CL:0000333,2.97e-08,10;CL:0000095,2.97e-08,10;CL:0000243,2.97e-08,10;CL:0000123,2.97e-08,10;CL:0000125,2.97e-08,10;CL:0000030,2.97e-08,10;CL:0000339,2.97e-08,10;CL:0002319,5.31e-08,43;CL:0000221,8.59e-08,44;CL:0000133,8.59e-08,44;CL:0000723,2.43e-07,91;CL:0000048,2.43e-07,91;CL:0000473,4.02e-07,7;CL:0000557,4.02e-07,7;CL:0002321,8.05e-07,70;CL:0000034,9.26e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.62e-11,16;UBERON:0001474,5.42e-08,22;UBERON:0004765,5.42e-08,22;UBERON:0001434,5.42e-08,22;UBERON:0002204,3.66e-07,32 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0.233612640595526,0.258246646883153,0,0,0.171217968225505,0.0797721589953364,0.342401459862411,0.611942816932982,0.333109761815663,0,0.699561878128147,0.315462165358238,0.274228867211478,0.42438965179803,0.0850432901510698,0.198581902401771,0.261199789138935,0.159992422793407,0.45881856213434,0,0.430761996159075,0.215471232685889,1.33016393619462,0,0,0.635030673459631,0,0,0.577703239502549,0,0,0.418531630736908,0.7813353445238,0,0,0,0.485510353031154,0.377690453926732,0.202753862439029,0.183546752161682,1.56478268869608,1.52617609466313,0.439372365468944,0.972149495371417,0.839918529752175,0,0.167782606057736,0,0,0.257259436035947,0.573066879877513,2.06268836910977,0.606949382578793,1.05798195854407,0.633831403506179,0.677689064138264,3.55717918444456,2.2497492932035,3.9554654502679,1.4209602298922,1.19840044207362,2.68952813725088,0.207379224616955,1.75507719831198,0.420649922702764,0.285650984403804,0.883474163806454,0.244981598429908,0.383381884072945,0,1.10115880999389,0,0.46081959976873,0.131886287730194,1.09785172322892,0,1.11673199600552,0,0.61119299110724,0.294628585473668,0.427115042397309,0.372798891650601,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0.649776417447669,0,0.421333260395256,0.170430322578058,0.779358013808606,0,0,0,0,0,1.08245520505607,0.506719730950197,0.505524445014783,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.718890747035522,0.599902730993408,0.381210681219194,0,0.457500602818626,0.251308704225729,0,0,0.20778804455956,0.162241263067758,0.203678727700633,0.124406970610093,0.505445516867349,0.210441855886474,0,0.459804208866946,0.360124259610698,0.30140963567143,0.0680364991513279,0.2562274405697,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0.420579897128254,0,0,0.264450566663544,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0,0.193952487167626,0,0,0,0.31399745568275,0,0,0,0,0,0,0.482354319504834,0.763877555344259,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0,0.390267295715598,0,0.221464689648775,0,0,0,0.144649058581512,3.01582567878545,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0.215423397732799,0.477937595905104,0,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0.35613120733451,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0.328281799490123,0.291480836629851,0.18542530201051,0,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0,0.523511883968059,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0.651021924219751,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.616265742988964,0.25984164595559,0.179026695667481,0,0.120195449519969,0.295379054349154,0.403865799792591,0,0,0.0974578807397524,0,0.116876902181569,0,0,0.358855426437903,0.167884616364078,0.386379188064381,0,0,0.214368379079066,0,1.12950368523413,0,0,0.343706364687375,0,0,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0.31136204275253,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0,0.280924522409647,0,0.17230640686684,0.476293691283074,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0 | |phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0.233612640595526,0.258246646883153,0,0,0.171217968225505,0.0797721589953364,0.342401459862411,0.611942816932982,0.333109761815663,0,0.699561878128147,0.315462165358238,0.274228867211478,0.42438965179803,0.0850432901510698,0.198581902401771,0.261199789138935,0.159992422793407,0.45881856213434,0,0.430761996159075,0.215471232685889,1.33016393619462,0,0,0.635030673459631,0,0,0.577703239502549,0,0,0.418531630736908,0.7813353445238,0,0,0,0.485510353031154,0.377690453926732,0.202753862439029,0.183546752161682,1.56478268869608,1.52617609466313,0.439372365468944,0.972149495371417,0.839918529752175,0,0.167782606057736,0,0,0.257259436035947,0.573066879877513,2.06268836910977,0.606949382578793,1.05798195854407,0.633831403506179,0.677689064138264,3.55717918444456,2.2497492932035,3.9554654502679,1.4209602298922,1.19840044207362,2.68952813725088,0.207379224616955,1.75507719831198,0.420649922702764,0.285650984403804,0.883474163806454,0.244981598429908,0.383381884072945,0,1.10115880999389,0,0.46081959976873,0.131886287730194,1.09785172322892,0,1.11673199600552,0,0.61119299110724,0.294628585473668,0.427115042397309,0.372798891650601,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0.649776417447669,0,0.421333260395256,0.170430322578058,0.779358013808606,0,0,0,0,0,1.08245520505607,0.506719730950197,0.505524445014783,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.718890747035522,0.599902730993408,0.381210681219194,0,0.457500602818626,0.251308704225729,0,0,0.20778804455956,0.162241263067758,0.203678727700633,0.124406970610093,0.505445516867349,0.210441855886474,0,0.459804208866946,0.360124259610698,0.30140963567143,0.0680364991513279,0.2562274405697,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0.420579897128254,0,0,0.264450566663544,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0,0.193952487167626,0,0,0,0.31399745568275,0,0,0,0,0,0,0.482354319504834,0.763877555344259,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0,0.390267295715598,0,0.221464689648775,0,0,0,0.144649058581512,3.01582567878545,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0.215423397732799,0.477937595905104,0,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0.35613120733451,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0.328281799490123,0.291480836629851,0.18542530201051,0,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0,0.523511883968059,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0.651021924219751,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.616265742988964,0.25984164595559,0.179026695667481,0,0.120195449519969,0.295379054349154,0.403865799792591,0,0,0.0974578807397524,0,0.116876902181569,0,0,0.358855426437903,0.167884616364078,0.386379188064381,0,0,0.214368379079066,0,1.12950368523413,0,0,0.343706364687375,0,0,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0.31136204275253,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0,0.280924522409647,0,0.17230640686684,0.476293691283074,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0 | ||
|short_description=p16@Gnb2 | |||
}} | }} |
Latest revision as of 14:45, 25 September 2015
Short description: | p16@Gnb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Gnb2_5end |
Coexpression cluster: | NA |
Association with transcript: | -187bp_to_ENSMUST00000167225_5end |
EntrezGene: | Gnb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 4.11e-16 | 3 |
mesenchymal stem cell of the bone marrow | 4.11e-16 | 3 |
monopoietic cell | 4.13e-12 | 4 |
myeloid leukocyte | 4.13e-12 | 4 |
phagocyte | 4.13e-12 | 4 |
monocyte | 4.13e-12 | 4 |
macrophage | 4.13e-12 | 4 |
tissue-resident macrophage | 4.13e-12 | 4 |
macrophage dendritic cell progenitor | 4.13e-12 | 4 |
monoblast | 4.13e-12 | 4 |
promonocyte | 4.13e-12 | 4 |
central nervous system macrophage | 4.91e-11 | 2 |
microglial cell | 4.91e-11 | 2 |
astrocyte of the cerebellum | 5.51e-11 | 2 |
oligodendrocyte precursor cell | 2.79e-10 | 8 |
migratory neural crest cell | 2.97e-08 | 10 |
neuron associated cell | 2.97e-08 | 10 |
glial cell (sensu Vertebrata) | 2.97e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 2.97e-08 | 10 |
glial cell | 2.97e-08 | 10 |
glioblast | 2.97e-08 | 10 |
glioblast (sensu Vertebrata) | 2.97e-08 | 10 |
neural cell | 5.31e-08 | 43 |
ectodermal cell | 8.59e-08 | 44 |
neurectodermal cell | 8.59e-08 | 44 |
somatic stem cell | 2.43e-07 | 91 |
multi fate stem cell | 2.43e-07 | 91 |
defensive cell | 4.02e-07 | 7 |
granulocyte monocyte progenitor cell | 4.02e-07 | 7 |
embryonic cell | 8.05e-07 | 70 |
stem cell | 9.26e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.62e-11 | 16 |
bone element | 5.42e-08 | 22 |
skeletal element | 5.42e-08 | 22 |
skeletal system | 5.42e-08 | 22 |
musculoskeletal system | 3.66e-07 | 32 |