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FFCP PHASE1:Mm9::chr4:8617684..8617730,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:8617684..8617730,+
|DHSsupport=NA
|short_description=p2@Chd7
|DPIdataset=NA
|description=CAGE_peak_2_at_Chd7_5end
|association_with_transcript=67bp_to_ENSMUST00000127476_5end
|EntrezGene=320790
|EntrezGene=320790
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=A2AJK6
|UniProt=A2AJK6
|association_with_transcript=67bp_to_ENSMUST00000127476_5end
|cluster_id=chr4:8617684..8617730,+
|description=CAGE_peak_2_at_Chd7_5end
|id=chr4:8617684..8617730,+
|ontology_enrichment_celltype=CL:0000540!2.50e-09!33;CL:0000047!2.50e-09!33;CL:0000031!2.50e-09!33;CL:0000404!2.50e-09!33;CL:0000107!7.28e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,1.85e-10,33;CL:0000047,1.85e-10,33;CL:0000031,1.85e-10,33;CL:0000404,1.85e-10,33;CL:0000107,1.06e-08,9;CL:0000393,1.86e-07,39;CL:0000211,1.86e-07,39;CL:0000221,5.34e-07,44;CL:0000133,5.34e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.14e-08!102;UBERON:0000924!1.14e-08!102;UBERON:0006601!1.14e-08!102;UBERON:0000970!3.44e-07!9;UBERON:0000019!3.44e-07!9;UBERON:0000047!3.44e-07!9;UBERON:0004088!3.44e-07!9;UBERON:0002104!3.44e-07!9;UBERON:0001456!3.44e-07!9;UBERON:0003072!3.44e-07!9;UBERON:0003071!3.44e-07!9;UBERON:0004128!3.44e-07!9;UBERON:0005085!4.48e-07!13;UBERON:0000020!5.54e-07!12;UBERON:0001032!5.54e-07!12;UBERON:0004456!5.54e-07!12;UBERON:0002410!7.28e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.60e-11,95;UBERON:0000924,9.60e-11,95;UBERON:0006601,9.60e-11,95;UBERON:0000970,3.90e-09,9;UBERON:0000019,3.90e-09,9;UBERON:0000047,3.90e-09,9;UBERON:0010312,3.90e-09,9;UBERON:0004088,3.90e-09,9;UBERON:0002104,3.90e-09,9;UBERON:0001456,3.90e-09,9;UBERON:0003072,3.90e-09,9;UBERON:0004128,3.90e-09,9;UBERON:0003071,3.90e-09,9;UBERON:0000033,4.64e-09,13;UBERON:0000020,5.03e-09,12;UBERON:0001032,5.03e-09,12;UBERON:0004456,5.03e-09,12;UBERON:0002346,5.80e-09,64;UBERON:0003075,5.80e-09,64;UBERON:0007284,5.80e-09,64;UBERON:0002410,1.06e-08,9;UBERON:0010371,2.48e-08,73;UBERON:0005085,5.52e-08,13;UBERON:0003056,6.68e-08,49;UBERON:0001444,6.99e-08,11;UBERON:0000010,1.02e-07,11;UBERON:0001017,2.84e-07,73;UBERON:0001016,2.88e-07,75
|phase1_expression=4.32401887182944,0.697950815278722,0.454999239389536,0.60492842261366,1.00179145989269,1.00727563147134,0.700837921786577,0,18.0209564354133,21.2998718953014,3.25314139628459,2.87179772383211,0.342401459862411,0.437102012094987,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.595303031057488,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.646413698057667,0.190023419456374,0.756090389279792,0.443461021310609,0.635030673459631,2.46025915033828,15.8481681015439,0,0.831173226792462,1.02084678131185,0.418531630736908,0,0,0.588231488031014,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0.419959264876088,0,0.503347818173209,0,0.672187598284928,0,0,0,5.46254444320914,5.28990979272033,1.90149421051854,0.677689064138264,0,0,0,0,0.599200221036809,0,4.45865332926454,2.8351247049655,1.89292465216244,0.285650984403804,0.883474163806454,3.67472397644862,3.25874601462004,1.83843757322004,0,0.383062014255563,0.921639199537461,2.90149833006426,3.38504281328916,4.68822033501084,1.11673199600552,0,0.916789486660861,1.17851434189467,0.854230084794618,2.60959224155421,0.530083353332288,1.51143120213571,0.579728977403356,0,0.679971333707751,2.15881276655127,1.29955283489534,1.34408066129201,0.421333260395256,0,0,0,2.11265129665021,0,0,0,1.5154372870785,0.760079596425296,1.51657333504435,0.68510327831436,1.55362730188303,0.445326417194474,0.520455980298408,0.913396434936424,0,0.150722640552623,1.52865319276416,0.251333182659351,0,0.289198713839823,0,1.13236794963186,0.220841518460394,0,0,16.9812862266697,14.6612694769419,0.255457055208591,0.239630249011841,0,0,0.299581278809645,0.915001205637253,2.38743269014442,0,0.255715457330331,0.20778804455956,0.973447578406546,0.305518091550949,0.373220911830279,0,5.89237196482127,7.54698569183682,6.66716102857071,7.92273371143537,8.13806016312861,19.0502197623718,21.5231050078548,23.2380276908127,15.0047955028629,3.88022387279116,2.08016688184601,0.879755620819744,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0.398068533636986,0,0.257347907114715,0.568326998791185,1.65700618028402,0.703578179943289,0.900310307305074,1.42046841351126,1.18058539048442,1.07986979021165,0.697601834251224,1.3413670069981,1.05088808130453,0.987359099480883,0.164167464079095,0.729619285912702,0.730999937126662,0.219550115291051,0.536825675041487,1.26173969138476,2.77842453424068,0.330418782983798,0.264450566663544,2.13288250535234,2.32236671860439,2.19074684247559,0.605050573870028,0.667134131534611,0,0.474529061544512,0.494096864172033,0.251335208800269,0.795825888164603,0.779856348476481,0,1.08069024937347,0.796565093017469,0.758671603812327,1.37098215131675,3.38123207019241,0.814605311381257,1.74557238450863,2.03393877681924,0.442655759869801,0.147610147979602,0,0.493588655687202,0.296452627087149,1.16791574001266,1.37591296579242,1.79889689907883,0.202860121388503,0.482354319504834,0.25462585178142,0.863088412352432,1.62135226775035,0.549122826376163,1.43768206527355,0.744281895337007,1.24815069245824,1.01031551178845,1.25578189465339,0.964887042726734,0.554259570499814,1.13694847062291,1.30371981153621,1.35796068620151,0.234690248288502,0.502518772325447,1.19021820443007,1.75620283072019,0.157635144106191,1.10732344824387,1.2756381492599,0.655453258862952,0.690739927463582,0.723245292907558,0,0,0.491764273019036,0.827810238914197,1.12385412991454,0.468846746368813,0,2.01976741763498,5.36363973007636,4.29482618726302,14.2179442503647,5.4962823529087,7.79795359288379,13.0215204162863,7.69140333182299,10.8134667427185,16.9973744517005,1.60660658210904,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,1.21390318077491,0.906970670894253,0.377210159511796,0.885905678642318,1.22974059177571,0.516856586336442,1.45413491791002,1.06949213515416,0.948110273807448,1.05418608574999,0,2.04263763452273,3.96134406868882,1.4229455216103,4.28674070063185,6.38424841112185,4.63758925765383,3.78462747384878,2.43571959291679,0,0.21183207086382,0,2.14352128823924,0.968786560175433,0.784068024066026,0.716234064018819,0.656563598980245,0.874442509889552,0,0.170870880797853,0.619160603889667,0.370389054739423,0,0.136694227721025,0,0.339956859987711,0.139951452323658,0.276399947608848,0,1.58167996790568,0.813277868507395,0.540026704109006,1.67270636811575,0.218362563746178,0.134864346384821,0.578574190077352,0.26175594198403,1.68499465279331,1.24267862617385,0,0.149516546043979,0.165458490457098,0.583353565032143,0.645799117388655,0.168956125490778,0.58678619322877,0.13020438484395,0.524296722128554,0.241584120826006,0.576060012515731,0,0.608175645870493,0.513554785824136,0,0.537080087002444,0,0.240390899039938,0,0.403865799792591,0.228620419965,0,0,0,0.350630706544707,0.226730383615211,0,0.358855426437903,0.167884616364078,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0,0,0.906284817968409,0.51776031175182,2.90604573235695,7.18244772121856,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|phase1_expression=4.32401887182944,0.697950815278722,0.454999239389536,0.60492842261366,1.00179145989269,1.00727563147134,0.700837921786577,0,18.0209564354133,21.2998718953014,3.25314139628459,2.87179772383211,0.342401459862411,0.437102012094987,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.595303031057488,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.646413698057667,0.190023419456374,0.756090389279792,0.443461021310609,0.635030673459631,2.46025915033828,15.8481681015439,0,0.831173226792462,1.02084678131185,0.418531630736908,0,0,0.588231488031014,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0.419959264876088,0,0.503347818173209,0,0.672187598284928,0,0,0,5.46254444320914,5.28990979272033,1.90149421051854,0.677689064138264,0,0,0,0,0.599200221036809,0,4.45865332926454,2.8351247049655,1.89292465216244,0.285650984403804,0.883474163806454,3.67472397644862,3.25874601462004,1.83843757322004,0,0.383062014255563,0.921639199537461,2.90149833006426,3.38504281328916,4.68822033501084,1.11673199600552,0,0.916789486660861,1.17851434189467,0.854230084794618,2.60959224155421,0.530083353332288,1.51143120213571,0.579728977403356,0,0.679971333707751,2.15881276655127,1.29955283489534,1.34408066129201,0.421333260395256,0,0,0,2.11265129665021,0,0,0,1.5154372870785,0.760079596425296,1.51657333504435,0.68510327831436,1.55362730188303,0.445326417194474,0.520455980298408,0.913396434936424,0,0.150722640552623,1.52865319276416,0.251333182659351,0,0.289198713839823,0,1.13236794963186,0.220841518460394,0,0,16.9812862266697,14.6612694769419,0.255457055208591,0.239630249011841,0,0,0.299581278809645,0.915001205637253,2.38743269014442,0,0.255715457330331,0.20778804455956,0.973447578406546,0.305518091550949,0.373220911830279,0,5.89237196482127,7.54698569183682,6.66716102857071,7.92273371143537,8.13806016312861,19.0502197623718,21.5231050078548,23.2380276908127,15.0047955028629,3.88022387279116,2.08016688184601,0.879755620819744,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0.398068533636986,0,0.257347907114715,0.568326998791185,1.65700618028402,0.703578179943289,0.900310307305074,1.42046841351126,1.18058539048442,1.07986979021165,0.697601834251224,1.3413670069981,1.05088808130453,0.987359099480883,0.164167464079095,0.729619285912702,0.730999937126662,0.219550115291051,0.536825675041487,1.26173969138476,2.77842453424068,0.330418782983798,0.264450566663544,2.13288250535234,2.32236671860439,2.19074684247559,0.605050573870028,0.667134131534611,0,0.474529061544512,0.494096864172033,0.251335208800269,0.795825888164603,0.779856348476481,0,1.08069024937347,0.796565093017469,0.758671603812327,1.37098215131675,3.38123207019241,0.814605311381257,1.74557238450863,2.03393877681924,0.442655759869801,0.147610147979602,0,0.493588655687202,0.296452627087149,1.16791574001266,1.37591296579242,1.79889689907883,0.202860121388503,0.482354319504834,0.25462585178142,0.863088412352432,1.62135226775035,0.549122826376163,1.43768206527355,0.744281895337007,1.24815069245824,1.01031551178845,1.25578189465339,0.964887042726734,0.554259570499814,1.13694847062291,1.30371981153621,1.35796068620151,0.234690248288502,0.502518772325447,1.19021820443007,1.75620283072019,0.157635144106191,1.10732344824387,1.2756381492599,0.655453258862952,0.690739927463582,0.723245292907558,0,0,0.491764273019036,0.827810238914197,1.12385412991454,0.468846746368813,0,2.01976741763498,5.36363973007636,4.29482618726302,14.2179442503647,5.4962823529087,7.79795359288379,13.0215204162863,7.69140333182299,10.8134667427185,16.9973744517005,1.60660658210904,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,1.21390318077491,0.906970670894253,0.377210159511796,0.885905678642318,1.22974059177571,0.516856586336442,1.45413491791002,1.06949213515416,0.948110273807448,1.05418608574999,0,2.04263763452273,3.96134406868882,1.4229455216103,4.28674070063185,6.38424841112185,4.63758925765383,3.78462747384878,2.43571959291679,0,0.21183207086382,0,2.14352128823924,0.968786560175433,0.784068024066026,0.716234064018819,0.656563598980245,0.874442509889552,0,0.170870880797853,0.619160603889667,0.370389054739423,0,0.136694227721025,0,0.339956859987711,0.139951452323658,0.276399947608848,0,1.58167996790568,0.813277868507395,0.540026704109006,1.67270636811575,0.218362563746178,0.134864346384821,0.578574190077352,0.26175594198403,1.68499465279331,1.24267862617385,0,0.149516546043979,0.165458490457098,0.583353565032143,0.645799117388655,0.168956125490778,0.58678619322877,0.13020438484395,0.524296722128554,0.241584120826006,0.576060012515731,0,0.608175645870493,0.513554785824136,0,0.537080087002444,0,0.240390899039938,0,0.403865799792591,0.228620419965,0,0,0,0.350630706544707,0.226730383615211,0,0.358855426437903,0.167884616364078,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0,0,0.906284817968409,0.51776031175182,2.90604573235695,7.18244772121856,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|short_description=p2@Chd7
}}
}}

Latest revision as of 06:18, 27 September 2015

Short description:p2@Chd7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Chd7_5end
Coexpression cluster:NA
Association with transcript: 67bp_to_ENSMUST00000127476_5end
EntrezGene:Chd7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Chd7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E718.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F221.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B216.98
cerebellum, neonate N30.CNhs11135.1395-42I214.66
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C67.55
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C97.92
eyeball, embryo E17.CNhs11023.1261-18D48.14
eyeball, neonate N00.CNhs11207.633-15C619.05
eyeball, neonate N01.CNhs11140.1532-43E721.52
eyeball, neonate N02.CNhs11205.1551-44G823.24
eyeball, neonate N16.CNhs11188.777-19A215.00
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.03
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B96.38
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.85e-1033
neuronal stem cell1.85e-1033
neuroblast1.85e-1033
electrically signaling cell1.85e-1033
autonomic neuron1.06e-089
electrically responsive cell1.86e-0739
electrically active cell1.86e-0739
ectodermal cell5.34e-0744
neurectodermal cell5.34e-0744

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure9.60e-1195
ectoderm9.60e-1195
presumptive ectoderm9.60e-1195
eye3.90e-099
camera-type eye3.90e-099
simple eye3.90e-099
immature eye3.90e-099
ocular region3.90e-099
visual system3.90e-099
face3.90e-099
optic cup3.90e-099
optic vesicle3.90e-099
eye primordium3.90e-099
head4.64e-0913
sense organ5.03e-0912
sensory system5.03e-0912
entire sense organ system5.03e-0912
neurectoderm5.80e-0964
neural plate5.80e-0964
presumptive neural plate5.80e-0964
autonomic nervous system1.06e-089
ecto-epithelium2.48e-0873
ectodermal placode5.52e-0813
pre-chordal neural plate6.68e-0849
subdivision of head6.99e-0811
peripheral nervous system1.02e-0711
central nervous system2.84e-0773
nervous system2.88e-0775
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