FFCP PHASE1:Mm9::chr2:60047950..60048023,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:60047950..60048023,+ to FFCP PHASE1:Mm9::chr2:60047950..60048023,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=57438 | |EntrezGene=57438 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3144 | |||
|TSSclassifier=NA | |||
|UniProt=A2AW82,Q9WV66 | |UniProt=A2AW82,Q9WV66 | ||
|association_with_transcript=0bp_to_ENSMUST00000143806,NM_020575,uc008jtx.1,uc008jty.1_5end | |||
|cluster_id=chr2:60047950..60048023,+ | |||
|description=CAGE_peak_1_at_March7_5end | |||
|id=chr2:60047950..60048023,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!6.51e-10!42;UBERON:0000065!1.54e-09!41;UBERON:0000072!5.44e-08!27;UBERON:0006562!2.58e-07!24;UBERON:0001557!2.58e-07!24;UBERON:0001042!2.58e-07!24;UBERON:0008814!2.58e-07!24;UBERON:0009145!2.58e-07!24;UBERON:0003408!2.88e-07!24;UBERON:0002370!6.69e-07!23;UBERON:0000974!6.69e-07!23;UBERON:0004807!6.69e-07!23;UBERON:0005058!6.69e-07!23;UBERON:0003351!6.69e-07!23;UBERON:0009113!6.69e-07!23;UBERON:0003295!6.69e-07!23;UBERON:0009722!6.69e-07!23;UBERON:0005562!6.69e-07!23;UBERON:0007690!6.69e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,6.51e-10,42;UBERON:0000153,1.23e-09,43;UBERON:0000065,1.54e-09,41;UBERON:0007811,1.11e-08,36;UBERON:0000072,5.44e-08,27;UBERON:0006562,2.58e-07,24;UBERON:0001557,2.58e-07,24;UBERON:0001042,2.58e-07,24;UBERON:0008814,2.58e-07,24;UBERON:0009145,2.58e-07,24;UBERON:0003408,2.88e-07,24;UBERON:0004119,3.14e-07,118;UBERON:0000925,3.14e-07,118;UBERON:0006595,3.14e-07,118;UBERON:0001007,5.18e-07,116;UBERON:0001555,5.18e-07,116;UBERON:0007026,5.18e-07,116;UBERON:0002370,6.69e-07,23;UBERON:0000974,6.69e-07,23;UBERON:0004807,6.69e-07,23;UBERON:0005058,6.69e-07,23;UBERON:0003351,6.69e-07,23;UBERON:0009113,6.69e-07,23;UBERON:0003295,6.69e-07,23;UBERON:0009722,6.69e-07,23;UBERON:0005562,6.69e-07,23;UBERON:0007690,6.69e-07,23 | |||
|phase1_expression=53.4897149330012,82.0092207952498,92.3648455960758,155.466604611711,167.29917380208,55.9037975466593,48.1242039626783,112.595538041055,204.988379452827,198.48671832105,74.4798161780947,58.3134482255909,117.443700732807,115.744612802753,38.6407323706169,38.8752513388466,40.5745889314325,80.1273900009924,87.4790086404613,66.2047856804927,33.0818398687661,45.1773827964028,50.6727590929535,70.3966660290989,69.0521936012182,62.5912840885372,52.9837255275662,61.1938300827925,61.7576113233215,63.2595625697426,41.2418749818867,32.3865643464412,23.9875267157982,15.8481681015439,44.194297821945,27.0962471934343,36.3421454147017,148.997260542339,89.0722292757133,92.6637026833623,178.822372361428,146.171733781107,108.268808725947,38.5244263005266,41.3617879375619,42.9499400058335,13.3006528539167,6.32272953503295,5.93152693383074,11.665793944457,10.2190087786515,5.75010257459886,128.185911028111,158.128946958473,161.997211186668,33.4437266846731,42.406949110936,41.7694394744728,17.8038485556446,20.1016572123373,22.8179305262225,8.80995783379743,16.8966011261116,10.3488467487361,10.8775299882367,16.3410426437603,4.49400165777607,4.61061966385865,29.4478498956077,20.2508907497536,26.5009451302741,13.9968982357864,9.93908434282261,29.6427734100189,20.7026217399391,23.8996884518605,29.731287869835,34.2202066068303,31.4893393175299,20.3104883104499,25.4335649214699,25.5247551572812,14.2383329490704,34.3285192119325,37.5883689530953,45.9620593338922,39.4369555813515,37.4662886108854,35.5155846732633,38.0124947337131,59.4222201838439,36.1378028332182,46.9180220258348,21.5881276655127,20.7928453583254,26.4335863387428,33.7066608316204,35.9607980639702,22.8611684050525,24.3804306412135,56.9007415897789,55.1803852881567,66.2493623237279,71.1066703153331,65.8132764674091,63.3399663687746,52.5745422815375,44.9884486093096,91.1461350438044,40.2278196865675,29.4925055502431,28.6197549613413,32.7474006103603,37.529937497603,53.38527303961,29.7829821451331,75.394465158984,41.5000154360146,60.1535175325915,36.5593080881145,37.7638996567273,32.0017667069247,72.6927868750676,54.1644474471362,50.0577629284158,52.6241533729698,75.9627889367535,67.1891058712617,69.7615546631125,35.6501721783478,32.9400434029411,58.3036193803691,39.1104720432622,42.4487659168349,34.492815396887,40.3980745038717,53.8730234768173,47.2746488318353,59.8952937487809,60.1863707835316,47.3638412384242,53.3372882285657,51.3177069945245,56.5143066883931,55.9940388015428,53.1671939182127,56.4084381849568,56.1386314503664,39.0178067208444,60.70305173387,59.4714799674147,49.7574312610595,55.6094498451196,70.3469376374776,74.6989155160835,54.5353891082671,54.0704154231191,59.4473665434992,65.0734413615907,51.988568906411,53.0028895557277,47.5363842257079,61.3168865165695,48.6007652416087,52.605085494596,49.0646623423361,50.703672864528,57.5653137870146,46.8995572253419,49.9069090800449,44.8310516788582,47.076395950957,39.2994706370981,46.1670080535679,48.1563982211851,49.7029277791944,91.526002886512,56.0635201326714,45.2171091134696,54.5756178872031,49.742840070328,59.0932727146394,51.1469500843202,51.360919050391,48.8764933390847,75.432121263597,59.0637740680633,77.5930240960488,69.797143188645,53.0303451105991,59.4379637155409,75.6736838366595,20.2944654019797,46.7276416573791,49.5914036961554,41.3412195525988,44.8030245357215,53.4434947564227,45.4038336552167,38.3786384746966,38.1506908654541,43.1890073726302,23.4197575398848,27.8631326545877,26.9285823305088,31.4806957338795,31.849039057995,36.4177511226149,36.1568709529616,35.3866249064497,51.0725964341361,32.3982467561936,34.5043695665651,46.5176184585629,36.196370081289,29.8043075977592,30.3181628852032,36.6657076236159,54.1326847188152,49.4572584720965,49.8672827912599,42.2665263580218,52.1012351200475,71.0226531553299,55.2261246855552,63.8087028495002,60.5318953367773,61.3457190327107,59.7955382465577,54.5664838003408,53.7050293602935,57.1363781396971,52.7769493787453,44.0563603893155,31.4729134732183,53.2557920368134,33.5550733074485,33.6397540519623,39.1804519450254,41.9101739159259,44.4866589376922,40.2151906625538,49.9782282740094,42.2974772376017,56.5908632169281,54.9168469730335,53.0302019194112,53.7750778556814,56.9214400242994,48.8408400961147,56.2082737424744,21.1898068364034,59.1279662453481,46.521574678255,19.9117707509944,35.2031922424723,32.9532677091579,37.3438057916678,15.651000322681,40.8888746765424,49.101375701962,46.8958511025982,51.6921198657846,48.6696607221157,28.4630243152497,35.0660847043835,53.7894577090985,45.0152735078276,13.4533031134065,42.0100588661921,56.394194298243,42.4517785892928,50.5165493248511,32.8822145043767,48.3423718611243,60.5839722670526,46.310963591542,72.7148375471927,97.0401204442392,73.7023942622065,82.3669173621642,88.6360858623331,63.8343032219373,35.4162326840073,38.275077298719,42.5156948004238,50.9284950266707,37.8620598579429,40.3247971777024,43.9254092556523,109.126152056055,107.90256974154,109.316179279299,34.3681422485441,49.66475099223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| |phase1_expression=53.4897149330012,82.0092207952498,92.3648455960758,155.466604611711,167.29917380208,55.9037975466593,48.1242039626783,112.595538041055,204.988379452827,198.48671832105,74.4798161780947,58.3134482255909,117.443700732807,115.744612802753,38.6407323706169,38.8752513388466,40.5745889314325,80.1273900009924,87.4790086404613,66.2047856804927,33.0818398687661,45.1773827964028,50.6727590929535,70.3966660290989,69.0521936012182,62.5912840885372,52.9837255275662,61.1938300827925,61.7576113233215,63.2595625697426,41.2418749818867,32.3865643464412,23.9875267157982,15.8481681015439,44.194297821945,27.0962471934343,36.3421454147017,148.997260542339,89.0722292757133,92.6637026833623,178.822372361428,146.171733781107,108.268808725947,38.5244263005266,41.3617879375619,42.9499400058335,13.3006528539167,6.32272953503295,5.93152693383074,11.665793944457,10.2190087786515,5.75010257459886,128.185911028111,158.128946958473,161.997211186668,33.4437266846731,42.406949110936,41.7694394744728,17.8038485556446,20.1016572123373,22.8179305262225,8.80995783379743,16.8966011261116,10.3488467487361,10.8775299882367,16.3410426437603,4.49400165777607,4.61061966385865,29.4478498956077,20.2508907497536,26.5009451302741,13.9968982357864,9.93908434282261,29.6427734100189,20.7026217399391,23.8996884518605,29.731287869835,34.2202066068303,31.4893393175299,20.3104883104499,25.4335649214699,25.5247551572812,14.2383329490704,34.3285192119325,37.5883689530953,45.9620593338922,39.4369555813515,37.4662886108854,35.5155846732633,38.0124947337131,59.4222201838439,36.1378028332182,46.9180220258348,21.5881276655127,20.7928453583254,26.4335863387428,33.7066608316204,35.9607980639702,22.8611684050525,24.3804306412135,56.9007415897789,55.1803852881567,66.2493623237279,71.1066703153331,65.8132764674091,63.3399663687746,52.5745422815375,44.9884486093096,91.1461350438044,40.2278196865675,29.4925055502431,28.6197549613413,32.7474006103603,37.529937497603,53.38527303961,29.7829821451331,75.394465158984,41.5000154360146,60.1535175325915,36.5593080881145,37.7638996567273,32.0017667069247,72.6927868750676,54.1644474471362,50.0577629284158,52.6241533729698,75.9627889367535,67.1891058712617,69.7615546631125,35.6501721783478,32.9400434029411,58.3036193803691,39.1104720432622,42.4487659168349,34.492815396887,40.3980745038717,53.8730234768173,47.2746488318353,59.8952937487809,60.1863707835316,47.3638412384242,53.3372882285657,51.3177069945245,56.5143066883931,55.9940388015428,53.1671939182127,56.4084381849568,56.1386314503664,39.0178067208444,60.70305173387,59.4714799674147,49.7574312610595,55.6094498451196,70.3469376374776,74.6989155160835,54.5353891082671,54.0704154231191,59.4473665434992,65.0734413615907,51.988568906411,53.0028895557277,47.5363842257079,61.3168865165695,48.6007652416087,52.605085494596,49.0646623423361,50.703672864528,57.5653137870146,46.8995572253419,49.9069090800449,44.8310516788582,47.076395950957,39.2994706370981,46.1670080535679,48.1563982211851,49.7029277791944,91.526002886512,56.0635201326714,45.2171091134696,54.5756178872031,49.742840070328,59.0932727146394,51.1469500843202,51.360919050391,48.8764933390847,75.432121263597,59.0637740680633,77.5930240960488,69.797143188645,53.0303451105991,59.4379637155409,75.6736838366595,20.2944654019797,46.7276416573791,49.5914036961554,41.3412195525988,44.8030245357215,53.4434947564227,45.4038336552167,38.3786384746966,38.1506908654541,43.1890073726302,23.4197575398848,27.8631326545877,26.9285823305088,31.4806957338795,31.849039057995,36.4177511226149,36.1568709529616,35.3866249064497,51.0725964341361,32.3982467561936,34.5043695665651,46.5176184585629,36.196370081289,29.8043075977592,30.3181628852032,36.6657076236159,54.1326847188152,49.4572584720965,49.8672827912599,42.2665263580218,52.1012351200475,71.0226531553299,55.2261246855552,63.8087028495002,60.5318953367773,61.3457190327107,59.7955382465577,54.5664838003408,53.7050293602935,57.1363781396971,52.7769493787453,44.0563603893155,31.4729134732183,53.2557920368134,33.5550733074485,33.6397540519623,39.1804519450254,41.9101739159259,44.4866589376922,40.2151906625538,49.9782282740094,42.2974772376017,56.5908632169281,54.9168469730335,53.0302019194112,53.7750778556814,56.9214400242994,48.8408400961147,56.2082737424744,21.1898068364034,59.1279662453481,46.521574678255,19.9117707509944,35.2031922424723,32.9532677091579,37.3438057916678,15.651000322681,40.8888746765424,49.101375701962,46.8958511025982,51.6921198657846,48.6696607221157,28.4630243152497,35.0660847043835,53.7894577090985,45.0152735078276,13.4533031134065,42.0100588661921,56.394194298243,42.4517785892928,50.5165493248511,32.8822145043767,48.3423718611243,60.5839722670526,46.310963591542,72.7148375471927,97.0401204442392,73.7023942622065,82.3669173621642,88.6360858623331,63.8343032219373,35.4162326840073,38.275077298719,42.5156948004238,50.9284950266707,37.8620598579429,40.3247971777024,43.9254092556523,109.126152056055,107.90256974154,109.316179279299,34.3681422485441,49.66475099223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| ||
|short_description=p1@March7 | |||
}} | }} |
Latest revision as of 19:36, 26 September 2015
Short description: | p1@March7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_March7_5end |
Coexpression cluster: | MCL_coexpression_mm9:3144 |
Association with transcript: | 0bp_to_ENSMUST00000143806, NM_020575, uc008jtx.1, uc008jty.1_5end |
EntrezGene: | March7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 6.51e-10 | 42 |
anterior region of body | 1.23e-09 | 43 |
respiratory tract | 1.54e-09 | 41 |
craniocervical region | 1.11e-08 | 36 |
segment of respiratory tract | 5.44e-08 | 27 |
pharynx | 2.58e-07 | 24 |
upper respiratory tract | 2.58e-07 | 24 |
chordate pharynx | 2.58e-07 | 24 |
pharyngeal arch system | 2.58e-07 | 24 |
pharyngeal region of foregut | 2.58e-07 | 24 |
gland of gut | 2.88e-07 | 24 |
endoderm-derived structure | 3.14e-07 | 118 |
endoderm | 3.14e-07 | 118 |
presumptive endoderm | 3.14e-07 | 118 |
digestive system | 5.18e-07 | 116 |
digestive tract | 5.18e-07 | 116 |
primitive gut | 5.18e-07 | 116 |
thymus | 6.69e-07 | 23 |
neck | 6.69e-07 | 23 |
respiratory system epithelium | 6.69e-07 | 23 |
hemolymphoid system gland | 6.69e-07 | 23 |
pharyngeal epithelium | 6.69e-07 | 23 |
thymic region | 6.69e-07 | 23 |
pharyngeal gland | 6.69e-07 | 23 |
entire pharyngeal arch endoderm | 6.69e-07 | 23 |
thymus primordium | 6.69e-07 | 23 |
early pharyngeal endoderm | 6.69e-07 | 23 |