FFCP PHASE1:Mm9::chr1:72898790..72898821,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=336 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:72898790..72898821,- | |||
|description=CAGE_peak_at_chr1:72898790..72898821,- | |||
|id=chr1:72898790..72898821,- | |||
|ontology_enrichment_celltype=CL:0002453!3.53e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.51e-23,8;CL:0000333,1.45e-18,10;CL:0000095,1.45e-18,10;CL:0000243,1.45e-18,10;CL:0000123,1.45e-18,10;CL:0000125,1.45e-18,10;CL:0000030,1.45e-18,10;CL:0000339,1.45e-18,10;CL:0000128,1.82e-18,6;CL:0000126,1.82e-18,6;CL:0000127,1.82e-18,6;CL:0002605,1.57e-07,2;CL:0002604,1.57e-07,2;CL:0002603,4.13e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.26e-08!22;UBERON:0007499!2.26e-08!22;UBERON:0006925!2.26e-08!22;UBERON:0009497!2.26e-08!22;UBERON:0000015!2.26e-08!22;UBERON:0002423!2.26e-08!22;UBERON:0006235!2.26e-08!22;UBERON:0008835!2.26e-08!22;UBERON:0003894!2.26e-08!22;UBERON:0004161!2.26e-08!22;UBERON:0008836!2.26e-08!22;UBERON:0009854!1.04e-07!23;UBERON:0009856!1.04e-07!23;UBERON:0002365!1.36e-07!25;UBERON:0002330!1.36e-07!25;UBERON:0004111!2.10e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.10e-19,22;UBERON:0007499,1.10e-19,22;UBERON:0006925,1.10e-19,22;UBERON:0009497,1.10e-19,22;UBERON:0000015,1.10e-19,22;UBERON:0002423,1.10e-19,22;UBERON:0006235,1.10e-19,22;UBERON:0008835,1.10e-19,22;UBERON:0003894,1.10e-19,22;UBERON:0004161,1.10e-19,22;UBERON:0008836,1.10e-19,22;UBERON:0009854,1.04e-18,23;UBERON:0009856,1.04e-18,23;UBERON:0002365,5.43e-17,25;UBERON:0002330,5.43e-17,25;UBERON:0005256,2.95e-11,45;UBERON:0003914,3.87e-09,47;UBERON:0002368,9.75e-09,60;UBERON:0005172,1.20e-08,49;UBERON:0005173,1.20e-08,49;UBERON:0002417,1.20e-08,49;UBERON:0000916,1.20e-08,49;UBERON:0002530,8.27e-08,65;UBERON:0003104,1.77e-07,61;UBERON:0009142,1.77e-07,61;UBERON:0004111,7.52e-07,122;UBERON:0000025,9.18e-07,114;UBERON:0000949,9.91e-07,72 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,9.81113203712009,21.0898735425093,36.358391126891,2.65974201088189,10.062679505548,0,0,0,0,0,0,0.202316460859598,0,0,1.0165335962074,0.889294796111139,0,0,0,1.49800055259202,3.45796474789399,0.311068836925433,0.270011876663381,0.210324961351382,0,0.220868540951614,0.367472397644862,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0,0.52091337055676,0,0,0,0.294628585473668,0.427115042397309,0.559198337475902,0,0,0,0.860423876981386,1.3599426674155,1.61910957491345,1.29955283489534,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0.255715457330331,0,0.162241263067758,1.52759045775474,0,0,0,0.780722657776222,1.37941262660084,0.540186389416048,1.20563854268572,0.408218994907967,0.12811372028485,1.03071897015702,0.258703370739016,0,0,0,0.43839146485515,0,0,0.205782136407943,1.79130840136644,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0.426576501070468,0.696710015581316,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0,0,0,1.1858105083486,0.166845105716094,0,0,0,0,0.50925170356284,1.43848068725405,5.35046248357617,12.0807021802756,11.5014565221884,9.30352369171258,13.1055822708115,2.27320990152401,2.51156378930677,1.92977408545347,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0.8858587585951,0.318909537314974,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.81443479676788,0,0,0.485561272309963,0,0.377210159511796,0,0,0,0,0.356497378384721,0,0,0,0,1.08036656418786,0.776152102696527,0.857348140126369,0.354680467284547,1.24858172321449,1.48094118541909,0.913394847343798,0,0.847328283455281,0,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.648032044930808,0.418176592028937,0.218362563746178,0.539457385539283,0.661227645802687,2.09404753587224,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0,0.168956125490778,0,0.39061315453185,0,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0,0,1.54551675225752,0.750729901804728,0,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.207574695168353,0.798049746802062,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0,0,0.338458431566706,0,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0,0,0 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,9.81113203712009,21.0898735425093,36.358391126891,2.65974201088189,10.062679505548,0,0,0,0,0,0,0.202316460859598,0,0,1.0165335962074,0.889294796111139,0,0,0,1.49800055259202,3.45796474789399,0.311068836925433,0.270011876663381,0.210324961351382,0,0.220868540951614,0.367472397644862,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0,0.52091337055676,0,0,0,0.294628585473668,0.427115042397309,0.559198337475902,0,0,0,0.860423876981386,1.3599426674155,1.61910957491345,1.29955283489534,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0.255715457330331,0,0.162241263067758,1.52759045775474,0,0,0,0.780722657776222,1.37941262660084,0.540186389416048,1.20563854268572,0.408218994907967,0.12811372028485,1.03071897015702,0.258703370739016,0,0,0,0.43839146485515,0,0,0.205782136407943,1.79130840136644,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0.426576501070468,0.696710015581316,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0,0,0,1.1858105083486,0.166845105716094,0,0,0,0,0.50925170356284,1.43848068725405,5.35046248357617,12.0807021802756,11.5014565221884,9.30352369171258,13.1055822708115,2.27320990152401,2.51156378930677,1.92977408545347,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0.8858587585951,0.318909537314974,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.81443479676788,0,0,0.485561272309963,0,0.377210159511796,0,0,0,0,0.356497378384721,0,0,0,0,1.08036656418786,0.776152102696527,0.857348140126369,0.354680467284547,1.24858172321449,1.48094118541909,0.913394847343798,0,0.847328283455281,0,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.648032044930808,0.418176592028937,0.218362563746178,0.539457385539283,0.661227645802687,2.09404753587224,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0,0.168956125490778,0,0.39061315453185,0,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0,0,1.54551675225752,0.750729901804728,0,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.207574695168353,0.798049746802062,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0,0,0.338458431566706,0,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0,0,0 | ||
|short_description=p@chr1:72898790..72898821,- | |||
}} | }} |
Latest revision as of 23:21, 5 August 2015
Short description: | p@chr1:72898790..72898821, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72898790..72898821, - |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.51e-23 | 8 |
migratory neural crest cell | 1.45e-18 | 10 |
neuron associated cell | 1.45e-18 | 10 |
glial cell (sensu Vertebrata) | 1.45e-18 | 10 |
neuron associated cell (sensu Vertebrata) | 1.45e-18 | 10 |
glial cell | 1.45e-18 | 10 |
glioblast | 1.45e-18 | 10 |
glioblast (sensu Vertebrata) | 1.45e-18 | 10 |
oligodendrocyte | 1.82e-18 | 6 |
macroglial cell | 1.82e-18 | 6 |
astrocyte | 1.82e-18 | 6 |
astrocyte of the cerebral cortex | 1.57e-07 | 2 |
astrocyte of the hippocampus | 1.57e-07 | 2 |
astrocyte of the cerebellum | 4.13e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 1.10e-19 | 22 |
epithelial sac | 1.10e-19 | 22 |
digestive gland | 1.10e-19 | 22 |
epithelium of foregut-midgut junction | 1.10e-19 | 22 |
anatomical boundary | 1.10e-19 | 22 |
hepatobiliary system | 1.10e-19 | 22 |
foregut-midgut junction | 1.10e-19 | 22 |
hepatic diverticulum | 1.10e-19 | 22 |
liver primordium | 1.10e-19 | 22 |
septum transversum | 1.10e-19 | 22 |
liver bud | 1.10e-19 | 22 |
digestive tract diverticulum | 1.04e-18 | 23 |
sac | 1.04e-18 | 23 |
exocrine gland | 5.43e-17 | 25 |
exocrine system | 5.43e-17 | 25 |
trunk mesenchyme | 2.95e-11 | 45 |
epithelial tube | 3.87e-09 | 47 |
endocrine gland | 9.75e-09 | 60 |
abdomen element | 1.20e-08 | 49 |
abdominal segment element | 1.20e-08 | 49 |
abdominal segment of trunk | 1.20e-08 | 49 |
abdomen | 1.20e-08 | 49 |
gland | 8.27e-08 | 65 |
mesenchyme | 1.77e-07 | 61 |
entire embryonic mesenchyme | 1.77e-07 | 61 |
anatomical conduit | 7.52e-07 | 122 |
tube | 9.18e-07 | 114 |
endocrine system | 9.91e-07 | 72 |