FFCP PHASE1:Mm9::chr1:33921508..33921524,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=304 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:33921508..33921524,- | |||
|description=CAGE_peak_at_chr1:33921508..33921524,- | |||
|id=chr1:33921508..33921524,- | |||
|ontology_enrichment_celltype=CL:0000117!1.11e-19!23;CL:0000337!1.11e-19!23;CL:0000540!8.42e-13!33;CL:0000047!8.42e-13!33;CL:0000031!8.42e-13!33;CL:0000404!8.42e-13!33;CL:0000393!2.25e-10!39;CL:0000211!2.25e-10!39;CL:0002614!3.25e-09!3;CL:0002610!3.68e-09!3;CL:0002319!3.89e-09!43;CL:0000221!7.31e-09!44;CL:0000133!7.31e-09!44;CL:0000055!1.87e-07!50 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.28e-28!52;UBERON:0005068!9.28e-28!52;UBERON:0006241!9.28e-28!52;UBERON:0007135!9.28e-28!52;UBERON:0000955!7.22e-27!50;UBERON:0006238!7.22e-27!50;UBERON:0001017!4.55e-26!73;UBERON:0005743!4.55e-26!73;UBERON:0000073!3.25e-25!75;UBERON:0001016!3.25e-25!75;UBERON:0002616!4.86e-25!49;UBERON:0002020!3.29e-24!34;UBERON:0000033!4.68e-22!63;UBERON:0002346!1.50e-20!71;UBERON:0003075!1.50e-20!71;UBERON:0007284!1.50e-20!71;UBERON:0004121!2.42e-18!102;UBERON:0000924!2.42e-18!102;UBERON:0006601!2.42e-18!102;UBERON:0002791!9.45e-18!29;UBERON:0003528!9.45e-18!29;UBERON:0001893!9.45e-18!29;UBERON:0003080!7.23e-16!40;UBERON:0007811!1.08e-14!86;UBERON:0002780!2.94e-14!39;UBERON:0001890!2.94e-14!39;UBERON:0006240!2.94e-14!39;UBERON:0003056!8.19e-14!49;UBERON:0003076!1.03e-13!12;UBERON:0003057!1.03e-13!12;UBERON:0000153!5.62e-13!94;UBERON:0002298!5.18e-12!6;UBERON:0002950!1.03e-11!4;UBERON:0001891!1.03e-11!4;UBERON:0009616!1.03e-11!4;UBERON:0000956!5.89e-11!21;UBERON:0001869!5.89e-11!21;UBERON:0000203!5.89e-11!21;UBERON:0002240!6.16e-11!6;UBERON:0005174!6.16e-11!6;UBERON:0001137!6.16e-11!6;UBERON:0000025!9.60e-11!114;UBERON:0002021!7.96e-10!10;UBERON:0000411!7.96e-10!10;UBERON:0001950!7.96e-10!10;UBERON:0004111!1.14e-09!122;UBERON:0002038!3.25e-09!3;UBERON:0002308!3.25e-09!3;UBERON:0009663!3.25e-09!3;UBERON:0009661!3.25e-09!3;UBERON:0006331!3.25e-09!3;UBERON:0000125!3.25e-09!3;UBERON:0002619!3.55e-09!17;UBERON:0004684!3.68e-09!3;UBERON:0002275!3.68e-09!3;UBERON:0002420!2.24e-08!8;UBERON:0007245!2.24e-08!8;UBERON:0010009!2.24e-08!8;UBERON:0010011!2.24e-08!8;UBERON:0000454!2.24e-08!8;UBERON:0001948!2.45e-08!5;UBERON:0002315!2.45e-08!5;UBERON:0000475!5.16e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,3.61e-10,12;UBERON:0003057,3.61e-10,12;UBERON:0004733,2.61e-09,6;UBERON:0004732,2.61e-09,6;UBERON:0002028,2.61e-09,6;UBERON:0007277,2.61e-09,6;UBERON:0001049,7.09e-09,52;UBERON:0005068,7.09e-09,52;UBERON:0006241,7.09e-09,52;UBERON:0007135,7.09e-09,52;UBERON:0001017,1.47e-08,73;UBERON:0000073,1.70e-08,54;UBERON:0001016,2.47e-08,75;UBERON:0001896,1.14e-07,2;UBERON:0002298,1.14e-07,2;UBERON:0005290,1.14e-07,2;UBERON:0010096,1.14e-07,2;UBERON:0002346,3.12e-07,64;UBERON:0003075,3.12e-07,64;UBERON:0007284,3.12e-07,64;UBERON:0002616,4.64e-07,46;UBERON:0000955,6.49e-07,47;UBERON:0006238,6.49e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.638436690425939,0.307213066512487,0,0.0914876436024097,0.52091337055676,0.837548997004143,1.12552522006336,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0.599162557619291,0,0,0,0,0.41557608911912,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.52956389248344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,1.3748254587495,0,0,0.675022500231806,0.45032120322422,0,1.03552062350364,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.638436690425939,0.307213066512487,0,0.0914876436024097,0.52091337055676,0.837548997004143,1.12552522006336,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0.599162557619291,0,0,0,0,0.41557608911912,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.52956389248344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,1.3748254587495,0,0,0.675022500231806,0.45032120322422,0,1.03552062350364,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:33921508..33921524,- | |||
}} | }} |
Latest revision as of 14:00, 5 August 2015
Short description: | p@chr1:33921508..33921524, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:33921508..33921524, - |
Coexpression cluster: | MCL_coexpression_mm9:304 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 3.61e-10 | 12 |
chordal neural plate | 3.61e-10 | 12 |
segmental subdivision of hindbrain | 2.61e-09 | 6 |
segmental subdivision of nervous system | 2.61e-09 | 6 |
hindbrain | 2.61e-09 | 6 |
presumptive hindbrain | 2.61e-09 | 6 |
neural tube | 7.09e-09 | 52 |
neural rod | 7.09e-09 | 52 |
future spinal cord | 7.09e-09 | 52 |
neural keel | 7.09e-09 | 52 |
central nervous system | 1.47e-08 | 73 |
regional part of nervous system | 1.70e-08 | 54 |
nervous system | 2.47e-08 | 75 |
medulla oblongata | 1.14e-07 | 2 |
brainstem | 1.14e-07 | 2 |
myelencephalon | 1.14e-07 | 2 |
future myelencephalon | 1.14e-07 | 2 |
neurectoderm | 3.12e-07 | 64 |
neural plate | 3.12e-07 | 64 |
presumptive neural plate | 3.12e-07 | 64 |
regional part of brain | 4.64e-07 | 46 |
brain | 6.49e-07 | 47 |
future brain | 6.49e-07 | 47 |