FFCP PHASE1:Mm9::chr1:197002831..197002840,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12902 | |EntrezGene=12902 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q3S5 | |UniProt=E9Q3S5 | ||
|association_with_transcript=-27bp_to_ENSMUST00000043104_5end | |||
|cluster_id=chr1:197002831..197002840,- | |||
|description=CAGE_peak_2_at_Cr2_5end | |||
|id=chr1:197002831..197002840,- | |||
|ontology_enrichment_celltype=CL:0000553!5.53e-09!6;CL:0000556!5.53e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.69e-37,6;CL:0000556,9.69e-37,6;CL:0000050,1.35e-24,9;CL:0000839,4.26e-17,13;CL:0000763,6.38e-14,16;CL:0002031,1.23e-12,25;CL:0002027,2.42e-12,3;CL:0002006,2.42e-12,3;CL:0002024,2.42e-12,3;CL:0000049,9.62e-12,19;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000988,7.55e-10,32;CL:0002032,7.55e-10,32;CL:0000037,7.55e-10,32;CL:0000837,7.55e-10,32;CL:0002320,8.52e-07,46;CL:0000134,8.52e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!2.19e-08!14;UBERON:0003918!2.19e-08!14;UBERON:0005095!2.19e-08!14;UBERON:0007687!2.19e-08!14;UBERON:0006554!4.00e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.19e-14,48;UBERON:0002405,2.19e-14,48;UBERON:0002371,6.38e-14,16;UBERON:0002106,1.50e-13,6;UBERON:0004457,1.50e-13,6;UBERON:0000042,1.50e-13,6;UBERON:0004854,1.50e-13,6;UBERON:0009034,1.50e-13,6;UBERON:0002095,1.50e-13,6;UBERON:0004782,1.50e-13,6;UBERON:0003281,1.50e-13,6;UBERON:0009664,1.50e-13,6;UBERON:0002296,1.50e-13,6;UBERON:0005602,1.50e-13,6;UBERON:0001179,1.50e-13,6;UBERON:0006293,1.50e-13,6;UBERON:0002390,4.50e-12,45;UBERON:0003061,4.50e-12,45;UBERON:0000029,2.01e-10,1;UBERON:0001097,2.01e-10,1;UBERON:0003968,2.01e-10,1;UBERON:0001467,2.01e-10,1;UBERON:0001474,3.73e-10,22;UBERON:0004765,3.73e-10,22;UBERON:0001434,3.73e-10,22;UBERON:0003887,2.22e-08,10;UBERON:0002204,5.41e-07,32;UBERON:0002384,8.52e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,3.23960427823721,0,23.1864691538305,25.2290557834559,17.3999757237192,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5836954543302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,24.3401610628341,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.949058123089023,0,0,0,0,0,0.432276099749388,0.398282546508734,0,0.114248512609729,0,0.407302655690628,0.387904974335251,0.280543279561274,0.252946148497029,0.738050739898011,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,7.34744787430767,0,0,0.753473828018764,2.7338845544205,2.97411625168479,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,3.23960427823721,0,23.1864691538305,25.2290557834559,17.3999757237192,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5836954543302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,24.3401610628341,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.949058123089023,0,0,0,0,0,0.432276099749388,0.398282546508734,0,0.114248512609729,0,0.407302655690628,0.387904974335251,0.280543279561274,0.252946148497029,0.738050739898011,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,7.34744787430767,0,0,0.753473828018764,2.7338845544205,2.97411625168479,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Cr2 | |||
}} | }} |
Latest revision as of 00:53, 27 September 2015
Short description: | p2@Cr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -27bp_to_ENSMUST00000043104_5end |
EntrezGene: | Cr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.69e-37 | 6 |
megakaryocyte | 9.69e-37 | 6 |
megakaryocyte-erythroid progenitor cell | 1.35e-24 | 9 |
myeloid lineage restricted progenitor cell | 4.26e-17 | 13 |
myeloid cell | 6.38e-14 | 16 |
hematopoietic lineage restricted progenitor cell | 1.23e-12 | 25 |
CD9-positive, CD41-positive megakaryocyte cell | 2.42e-12 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.42e-12 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.42e-12 | 3 |
common myeloid progenitor | 9.62e-12 | 19 |
lymphocyte of B lineage | 3.74e-10 | 1 |
B cell | 3.74e-10 | 1 |
pro-B cell | 3.74e-10 | 1 |
hematopoietic cell | 7.55e-10 | 32 |
hematopoietic oligopotent progenitor cell | 7.55e-10 | 32 |
hematopoietic stem cell | 7.55e-10 | 32 |
hematopoietic multipotent progenitor cell | 7.55e-10 | 32 |
connective tissue cell | 8.52e-07 | 46 |
mesenchymal cell | 8.52e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.19e-14 | 48 |
immune system | 2.19e-14 | 48 |
bone marrow | 6.38e-14 | 16 |
spleen | 1.50e-13 | 6 |
cavity lining | 1.50e-13 | 6 |
serous membrane | 1.50e-13 | 6 |
gastrointestinal system mesentery | 1.50e-13 | 6 |
stomach region | 1.50e-13 | 6 |
mesentery | 1.50e-13 | 6 |
gastrointestinal system serosa | 1.50e-13 | 6 |
mesentery of stomach | 1.50e-13 | 6 |
gut mesentery | 1.50e-13 | 6 |
dorsal mesentery | 1.50e-13 | 6 |
dorsal mesogastrium | 1.50e-13 | 6 |
peritoneal cavity | 1.50e-13 | 6 |
spleen primordium | 1.50e-13 | 6 |
hematopoietic system | 4.50e-12 | 45 |
blood island | 4.50e-12 | 45 |
lymph node | 2.01e-10 | 1 |
axillary lymph node | 2.01e-10 | 1 |
peripheral lymph node | 2.01e-10 | 1 |
shoulder | 2.01e-10 | 1 |
bone element | 3.73e-10 | 22 |
skeletal element | 3.73e-10 | 22 |
skeletal system | 3.73e-10 | 22 |
intraembryonic coelom | 2.22e-08 | 10 |
musculoskeletal system | 5.41e-07 | 32 |
connective tissue | 8.52e-07 | 46 |